CX043843

Overview
NameCX043843
Unique NameCX043843
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length764
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043843 vs. ExPASy Swiss-Prot
Match: ACCO4_PETHY (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.395e-19
Identity = 56/196 (28.57%), Postives = 99/196 (50.51%), Query Frame = 1
Query:  184 ISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQ---GMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQ 762
            +   P+I++++L   E  D+ +  +   C+ WGFF+LVNHG+    ++ ++K  +G +   ME++ K       +E      V +E   LDW   F +  LPV        P L    RE +  ++  L+ LAE L+  + E L ++   +++ F        G +++ YPPCP+P+ + GL  H+DA  + +L Q
Sbjct:    1 MENFPIINLENLCGAER-DATMEMIKDACENWGFFELVNHGIPHEVMDTVEKFTKGHYKKCMEQRFKELVASKGLEA-----VQAEVTDLDWESTFFLRHLPV--SNISEVPDLDDEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQ 188          
BLAST of CX043843 vs. ExPASy Swiss-Prot
Match: ACCO3_CUCME (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Cucumis melo GN=ACO3 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.395e-19
Identity = 58/192 (30.21%), Postives = 101/192 (52.60%), Query Frame = 1
Query:  196 PVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQ---GMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQ 762
            PVI+M +L+ E  + S L +++  C+ WGFF+LVNHG+S   ++K++K  +  +   ME++ K       +   G   V +E    DW   F +  LPV          L    ++ ++ ++ EL+ LAE ++  + E L ++   +++ F        G +++ YPPCP+PE + GL  H+DA  L +L Q
Sbjct:    6 PVINMNNLNGESRV-SVLNQINDACENWGFFELVNHGISHELMDKVEKLTKEHYRKCMEQRFKEM-----VASKGLDSVETEINDTDWESTFFLRHLPVSNMSE--IGDLDEEYKKVMKEFADELEKLAEEVLDLLCENLGLEKGYLKKVFYGSKGPNFGTKVSNYPPCPKPELIKGLRAHTDAGGLILLFQ 189          
BLAST of CX043843 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.395e-19
Identity = 55/196 (28.06%), Postives = 98/196 (50.00%), Query Frame = 1
Query:  184 ISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQ---GMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQ 762
            +   P+I+++ L+  E + + + K++  C+ WGFF+LVNHG+    ++ ++K  +G +   ME++ K       +EG     V  E   +DW   F +  LP         P L    RE +  +   L+ LAE L+  + E L ++   ++  F        G +++ YPPCP+P+ + GL  H+DA  + +L Q
Sbjct:    1 MENFPIINLEKLNGAERV-ATMEKINDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFKELVAKKGLEG-----VEVEVTDMDWESTFFLRHLP--SSNISQLPDLDDVYREVMRDFRKRLEKLAEELLDLLCENLGLEKSYLKNTFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQ 188          
BLAST of CX043843 vs. ExPASy Swiss-Prot
Match: ACCO1_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Solanum lycopersicum GN=ACO1 PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 7.496e-19
Identity = 54/196 (27.55%), Postives = 98/196 (50.00%), Query Frame = 1
Query:  184 ISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQ---GMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQ 762
            +   P+I+++ L+ +E  ++ +  +   C+ WGFF+LVNHG+    ++ ++K  +G +   ME++ K       +E      V +E   LDW   F +  LP         P L    RE +  ++  L+ LAE L+  + E L ++   ++  F        G +++ YPPCP+P+ + GL  H+DA  + +L Q
Sbjct:    1 MENFPIINLEKLNGDERANT-MEMIKDACENWGFFELVNHGIPHEVMDTVEKMTKGHYKKCMEQRFKELVASKGLEA-----VQAEVTDLDWESTFFLRHLPT--SNISQVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQ 188          
BLAST of CX043843 vs. ExPASy Swiss-Prot
Match: ACCH1_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 1 OS=Arabidopsis thaliana GN=At1g06620 PE=2 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.496e-19
Identity = 58/192 (30.21%), Postives = 92/192 (47.92%), Query Frame = 1
Query:  193 IPVIDMQSLHSEE-SMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQR-PGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQ 762
            IP ID++   ++  +  S + K+    ++WGFFQ++NHG+    LEK+   +  F     E KK ++ R P     +   F +      +W D     T P     P     LP +  E +  YS E+  L + L   + E L +    +++        +  +YYPPCPQP+  +GL+ HSD + LTILLQ
Sbjct:   62 IPTIDLKGGGTDSITRRSLVEKIGDAAEKWGFFQVINHGIPMDVLEKMIDGIREFHEQDTEVKKGFYSRDPASKMVYSSNFDLFSSPAANWRDTLGCYTAP----DPPRPEDLPATCGEMMIEYSKEVMKLGKLLFELLSEALGLNTNHLKDMDCTNSLLLLGHYYPPCPQPDLTLGLTKHSDNSFLTILLQ 249          
BLAST of CX043843 vs. ExPASy Swiss-Prot
Match: ACCO4_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Solanum lycopersicum GN=ACO4 PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.279e-18
Identity = 54/196 (27.55%), Postives = 98/196 (50.00%), Query Frame = 1
Query:  184 ISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQ---GMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQ 762
            +   P+I++++L+ +E   + +  +   C+ WGFF+LVNHG+    ++ ++K  +G +   ME++ K       +E      V +E   LDW   F +  LP         P L    RE +  ++  L+ LAE L+  + E L ++   ++  F        G +++ YPPCP+P+ + GL  H+DA  + +L Q
Sbjct:    1 MENFPIINLENLNGDERAKT-MEMIKDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFKELVASKGLEA-----VQAEVTDLDWESTFFLRHLPT--SNISQVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQ 188          
BLAST of CX043843 vs. ExPASy Swiss-Prot
Match: G2OX8_ARATH (Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis thaliana GN=GA2OX7 PE=1 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 2.181e-18
Identity = 66/197 (33.50%), Postives = 100/197 (50.76%), Query Frame = 1
Query:  190 QIPVIDMQSL--HSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFF-ENGLQG---MRMNYYPPCPQPEKVMGLSPHSDAAALTILLQ 762
            ++PVID+  L   +EE  +     +    +EWGFFQ++NHG+S   LEK+++E    F    ++K K  +       +G     S  Q L W++ F +    +   K         +L  T+E ++ E + LA  L     EVL  K  +   FF EN ++    +RMN YPPCP+P +V GL PH+D+  LTIL Q
Sbjct:   41 ELPVIDVSRLIDGAEEEREKCKEAIARASREWGFFQVINHGISMDVLEKMRQEQIRVFREPFDKKSKSEKFSAGSYRWGTPSATSIRQ-LSWSEAFHVPMTDISDNKDFT------TLSSTMEKFASESEALAYML----AEVLAEKSGQNSSFFKENCVRNTCYLRMNRYPPCPKPSEVYGLMPHTDSDFLTILYQ 226          
BLAST of CX043843 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.720e-18
Identity = 53/196 (27.04%), Postives = 96/196 (48.98%), Query Frame = 1
Query:  184 ISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQ---GMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQ 762
            +   P+I +  ++  E   + +  +   C+ WGFF+LVNHG+    ++ ++K  +G +   ME++ K       +EG     V +E   +DW   F +  LP+        P L    RE +  ++  L+ LAE L+  + E L ++   ++  F        G +++ YPPCP+P+ + GL  H+DA  + +L Q
Sbjct:    1 MENFPIISLDKVNGVERA-ATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEG-----VQAEVTDMDWESTFFLKHLPI--SNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQ 188          
BLAST of CX043843 vs. ExPASy Swiss-Prot
Match: G3O23_WHEAT (Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aestivum GN=GA3ox2-3 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.346e-18
Identity = 59/201 (29.35%), Postives = 98/201 (48.76%), Query Frame = 1
Query:  193 IPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQRPGDMEGFGQAFVVSEEQKLDWAD--LFSMMTLPVHLRKPHLFPKLPPSLRE---TLEVYSMELKTLAENLISKMGEVLNIKDEEM------REFFENGLQGMRMNYYPPCPQPEKVMGLSPHSDAAALTILLQ 762
            +PV+DM+   + E++           ++WG F LV HG+    L +++  + G F L   EK +  +RPGD  G+G   + S   K  W++   FS   L   LRK  L+PK     R     +E +  E++ LA+ L+      L +  E++      ++  E     M +N+YP CP P++ +GL  H+D+   T +LQ
Sbjct:   49 VPVVDMRDPFAAEAVG-------LAAQDWGAFLLVGHGVPLDLLVRVEAAIAGMFALPASEKMRAVRRPGDSCGYGSPPISSFFSKCMWSEGYTFSPANLRSDLRK--LWPKAGHDYRHFCAVMEEFHREMRALADKLLELFLVALGLTGEQVAAVESEQKIAETMTATMHLNWYPKCPDPKRALGLIAHTDSGFFTFVLQ 240          
BLAST of CX043843 vs. ExPASy Swiss-Prot
Match: HY6H_HYONI (Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H6H PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.149e-17
Identity = 60/220 (27.27%), Postives = 109/220 (49.55%), Query Frame = 1
Query:  142 RPDQDSPLISDDTLISQIPVIDMQSLHSEESMDSELAKLDFVCKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKY--------WQRPGDMEG--FGQAFVVSEEQKLDWADLFSMMTLPVHLRKPHLFPKLPPSLRETLEVYSMELKTLAENLISKMGEVLNIKDEEMREFFENGLQGMRM---NYYPPCPQPEKVMGLSPHSDAAALTILLQ 762
            R ++D P+ +D      +P+ID+Q  H    +  ++ K    C+++G FQ++NHG     + +  +  + FF L  EEK+K+        ++ P + +   + +   +S E+ L W D  +    P+     + +P+ P   RE +  YS+E++ L   ++  + E L +K      +F+N L  ++M   NYYPPCP P   +G   H D   +T+L Q
Sbjct:   24 RAEKDVPVGND------VPIIDLQQHH--HLLVQQITK---ACQDFGLFQVINHGFPEELMLETMEVCKEFFALPAEEKEKFKPKGEAAKFELPLEQKAKLYVEGEQLSNEEFLYWKDTLAHGCHPLDQDLVNSWPEKPAKYREVVAKYSVEVRKLTMRMLDYICEGLGLK----LGYFDNELSQIQMMLTNYYPPCPDPSSTLGSGGHYDGNLITLLQQ 228          
The following BLAST results are available for this feature:
BLAST of CX043843 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
ACCO4_PETHY4.395e-1928.571-aminocyclopropane-1-carboxylate oxidase 4 OS=Pet... [more]
ACCO3_CUCME4.395e-1930.211-aminocyclopropane-1-carboxylate oxidase 3 OS=Cuc... [more]
ACCO2_SOLLC4.395e-1928.061-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]
ACCO1_SOLLC7.496e-1927.551-aminocyclopropane-1-carboxylate oxidase 1 OS=Sol... [more]
ACCH1_ARATH7.496e-1930.211-aminocyclopropane-1-carboxylate oxidase homolog ... [more]
ACCO4_SOLLC1.279e-1827.551-aminocyclopropane-1-carboxylate oxidase 4 OS=Sol... [more]
G2OX8_ARATH2.181e-1833.50Gibberellin 2-beta-dioxygenase 8 OS=Arabidopsis th... [more]
ACCO1_PETHY3.720e-1827.041-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]
G3O23_WHEAT6.346e-1829.35Gibberellin 3-beta-dioxygenase 2-3 OS=Triticum aes... [more]
HY6H_HYONI3.149e-1727.27Hyoscyamine 6-dioxygenase OS=Hyoscyamus niger GN=H... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_13G06_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-13G06-N11-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043843 ID=CX043843; Name=CX043843; organism=Citrus sinensis; type=EST; length=764bp
TTCCAAAATCAATACAAAGCTGCAGCAATCTTGAAAGGATTTGAGGAACA
AAAGATGGCCCAGATTGGAAGTTCTCTCCTTGTGCCTTGTGTTCAAGAGT
TGGTCAAGAATCCGGCGTTAGTTGTCCCCGACAGATACATACGTCCAGAT
CAAGATTCACCCCTCATTTCTGATGATACTTTGATTTCACAGATACCAGT
TATTGACATGCAAAGCTTACATTCTGAAGAATCAATGGATTCTGAGTTAG
CCAAGCTCGACTTCGTATGCAAAGAATGGGGTTTTTTCCAGCTGGTAAAT
CATGGAATGAGCACAGCATTTCTAGAGAAATTAAAGAAAGAGGTTGAGGG
ATTCTTCAATCTCAGCATGGAAGAAAAGAAAAAATATTGGCAGCGTCCAG
GAGATATGGAAGGATTTGGACAAGCCTTTGTTGTATCTGAGGAACAAAAG
CTTGATTGGGCTGACCTTTTCTCCATGATGACTCTTCCAGTTCATCTGAG
GAAACCACATTTATTTCCTAAGCTCCCTCCTTCCCTCAGAGAGACCTTGG
AAGTTTACTCAATGGAATTAAAAACCCTAGCCGAGAACCTAATATCGAAA
ATGGGAGAAGTGTTAAATATCAAAGATGAAGAAATGAGAGAATTCTTTGA
AAATGGACTGCAAGGAATGAGGATGAATTATTACCCTCCATGTCCTCAGC
CCGAGAAGGTTATGGGCCTGTCGCCGCATTCTGATGCGGCTGCACTTACC
ATTCTGCTACAACT
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