CX043800
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043800 vs. ExPASy Swiss-Prot
Match: EF103_ARATH (Ethylene-responsive transcription factor 6 OS=Arabidopsis thaliana GN=ERF6 PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 3.334e-15 Identity = 38/64 (59.38%), Postives = 45/64 (70.31%), Query Frame = 1 Query: 313 KEKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSXXXXXXXXXXXXFSMRGSSAILNFPVE 504 +++ YRGVR RPWGKFAAEIRD TR G RVWLGTF++ F +RGS AILNFP+E Sbjct: 133 EKRHYRGVRMRPWGKFAAEIRDPTRRGTRVWLGTFETAIEAARAYDKEAFRLRGSKAILNFPLE 196
BLAST of CX043800 vs. ExPASy Swiss-Prot
Match: ERF98_ARATH (Ethylene-responsive transcription factor ERF098 OS=Arabidopsis thaliana GN=ERF098 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 7.427e-15 Identity = 38/73 (52.05%), Postives = 48/73 (65.75%), Query Frame = 1 Query: 286 SSTTEENPTKEKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSXXXXXXXXXXXXFSMRGSSAILNFPVE 504 SS + K+ +RGVRRRPWGKFAAEIRD +R+G R+WLGTF++ F++RG AILNFP E Sbjct: 7 SSNNQSQDDKQARFRGVRRRPWGKFAAEIRDPSRNGARLWLGTFETAEEAARAYDRAAFNLRGHLAILNFPNE 79
BLAST of CX043800 vs. ExPASy Swiss-Prot
Match: EF106_ARATH (Ethylene-responsive transcription factor ERF106 OS=Arabidopsis thaliana GN=ERF106 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.161e-14 Identity = 40/97 (41.24%), Postives = 55/97 (56.70%), Query Frame = 1 Query: 220 EATPEATSEALVSSKRIKEEEVSSTTE--ENPTKEKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSXXXXXXXXXXXXFSMRGSSAILNFPVE 504 E++ ++ E SS + ++ E E + YRGVRRRPWGKFAAEIRD + G R+WLGTF+S F +RG A+LNFP++ Sbjct: 73 ESSSSSSPELNSSSSTYETDQSVKKAERFEEEVDARHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDVDAARAYDCAAFKLRGRKAVLNFPLD 169
BLAST of CX043800 vs. ExPASy Swiss-Prot
Match: ERF91_ARATH (Ethylene-responsive transcription factor ERF091 OS=Arabidopsis thaliana GN=ERF091 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.829e-13 Identity = 49/126 (38.89%), Postives = 69/126 (54.76%), Query Frame = 1 Query: 166 LPFNENDSEEMLLYGLIAEATPEATSEALVSSKRIKEEEVSSTTEENPTKEKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSXXXXXXXXXXXXFSMRGS-SAILNFPVERVQESLKDMKCN 540 L + D E + IA + P T+ +++ I +SS K + YRGVR+RPWGKFAAEIRDSTR+G+RVWLGTF + +RG+ A NF +E V +++ +M CN Sbjct: 61 LDMSTEDQEWTEILDAIA-SFPNKTNHDPLTNPTIDSCSLSSRVS---CKTRKYRGVRKRPWGKFAAEIRDSTRNGVRVWLGTFQTAEEAAMAYDKAAVRIRGTQKAHTNFQLETVIKAM-EMDCN 181
BLAST of CX043800 vs. ExPASy Swiss-Prot
Match: ERF71_ARATH (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana GN=ERF071 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.641e-12 Identity = 39/88 (44.32%), Postives = 54/88 (61.36%), Query Frame = 1 Query: 259 SKRIKEEEVSSTTEENPTKEKS--YRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSXXXXXXXXXXXXFSMRGSSAILNFPVERVQE 516 S R K + VS + E + +E+ YRG+R+RPWGK+AAEIRD ++ G+RVWLGTF + +RG A LNFP +V+E Sbjct: 26 SSRKKRKPVSVSEERDGKRERKNLYRGIRQRPWGKWAAEIRDPSK-GVRVWLGTFKTADEAARAYDVAAIKIRGRKAKLNFPNTQVEE 112
BLAST of CX043800 vs. ExPASy Swiss-Prot
Match: EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana GN=ERF112 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 3.450e-12 Identity = 40/96 (41.67%), Postives = 57/96 (59.38%), Query Frame = 1 Query: 214 IAEATPEATSEALVSSKRIKEEEVSSTTEENP-TKEKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSXXXXXXXXXXXXFSMRGSSAILNFP 498 +++ E T + + SS I ++ S T +E +++++YRGVR+RPWGK+AAEIRD + RVWLGTFD+ F RG A LNFP Sbjct: 34 VSDFVSELTGQPIPSS--IDDQSSSLTLQEKSNSRQRNYRGVRQRPWGKWAAEIRDPNK-AARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLNFP 126
BLAST of CX043800 vs. ExPASy Swiss-Prot
Match: PTI6_SOLLC (Pathogenesis-related genes transcriptional activator PTI6 OS=Solanum lycopersicum GN=PTI6 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.685e-12 Identity = 37/88 (42.05%), Postives = 53/88 (60.23%), Query Frame = 1 Query: 256 SSKRIKEEEVSSTTEENP-TKEKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSXXXXXXXXXXXXFSMRGSSAILNFPVERVQE 516 S+K I + + S + ++ T+ K +RGVR+RPWG++AAEIRD TR G RVWLGT+D+ ++G A+ NFPV E Sbjct: 74 STKSIGDRKRRSVSPDSDVTRRKKFRGVRQRPWGRWAAEIRDPTR-GKRVWLGTYDTPEEAAVVYDKAAVKLKGPDAVTNFPVSTTAE 160
BLAST of CX043800 vs. ExPASy Swiss-Prot
Match: EF110_ARATH (Ethylene-responsive transcription factor ERF110 OS=Arabidopsis thaliana GN=ERF110 PE=2 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 1.004e-11 Identity = 42/95 (44.21%), Postives = 53/95 (55.79%), Query Frame = 1 Query: 220 EATPEATSEALVSSKR--IKEEEVSSTTEENPTKEKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSXXXXXXXXXXXXFSMRGSSAILNFP 498 ++ P +S A V S I+E + EE K++ YRGVR+RPWGK+AAEIRD R RVWLGTFD+ RG+ A LNFP Sbjct: 40 DSAPIPSSFARVDSSHNPIEESMSKAFPEEAREKKRRYRGVRQRPWGKWAAEIRDPHR-AARVWLGTFDTAEAAARAYDEAALRFRGNKAKLNFP 133
BLAST of CX043800 vs. ExPASy Swiss-Prot
Match: RAP23_ARATH (Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana GN=RAP2-3 PE=1 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.311e-11 Identity = 37/98 (37.76%), Postives = 55/98 (56.12%), Query Frame = 1 Query: 205 YGLIAEATPEATSEALVSSKRIKEEEVSSTTEENPTKEKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSXXXXXXXXXXXXFSMRGSSAILNFP 498 +G + + T++ V + +K+E+ + + K YRG+R+RPWGK+AAEIRD R G+RVWLGTF++ +RG A LNFP Sbjct: 40 WGFYSTSKLHPTNQVNVKEEAVKKEQATEPGKRRKRKNV-YRGIRKRPWGKWAAEIRD-PRKGVRVWLGTFNTAEEAAMAYDVAAKQIRGDKAKLNFP 135
BLAST of CX043800 vs. ExPASy Swiss-Prot
Match: RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana GN=RAP2-12 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.311e-11 Identity = 39/105 (37.14%), Postives = 57/105 (54.29%), Query Frame = 1 Query: 235 ATSEALVSSKRIKEEEVSSTTEENPTKEKSYRGVRRRPWGKFAAEIRDSTRHGIRVWLGTFDSXXXXXXXXXXXXFSMRGSSAILNFPVERVQESLKDMKCNTEE 549 A +E V K++ + + N ++ YRG+R+RPWGK+AAEIRD R G R+WLGTF + +RGS A +NFP E +MK N+++ Sbjct: 95 AAAEGSVFGKKVTGLDGDAEKSANRKRKNQYRGIRQRPWGKWAAEIRD-PREGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNFPEE-------NMKANSQK 191 The following BLAST results are available for this feature:
BLAST of CX043800 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043800 ID=CX043800; Name=CX043800; organism=Citrus sinensis; type=EST; length=822bpback to top |