CX043795
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043795 vs. ExPASy Swiss-Prot
Match: CH602_TRIEI (60 kDa chaperonin 2 OS=Trichodesmium erythraeum (strain IMS101) GN=groL2 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.251e-12 Identity = 36/73 (49.32%), Postives = 49/73 (67.12%), Query Frame = -1 Query: 577 VAPASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 795 +AP IA NA K ++ TG+NA +++ +M +AG++DPAKVTR ALQNAAS+AGMVLTT+ I Sbjct: 448 LAPLKRIAENAGQNGAVIGERVKEKDFNTGFNAANNEFVDMFEAGIVDPAKVTRSALQNAASIAGMVLTTECI 520
BLAST of CX043795 vs. ExPASy Swiss-Prot
Match: CH602_THEVL (60 kDa chaperonin 2 OS=Thermosynechococcus vulcanus GN=groL2 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.251e-12 Identity = 36/72 (50.00%), Postives = 48/72 (66.67%), Query Frame = -1 Query: 577 APASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 792 AP + IA NA +A ++ G+NA T YE+++ AG+IDPAKV R ALQNA S+AGMVLTT+A+ Sbjct: 448 APVAQIADNAGAEGAVVVENVRAGDFNYGFNAATGAYEDLVSAGIIDPAKVVRSALQNAGSIAGMVLTTEAL 519
BLAST of CX043795 vs. ExPASy Swiss-Prot
Match: CH602_THEEB (60 kDa chaperonin 2 OS=Thermosynechococcus elongatus (strain BP-1) GN=groL2 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.251e-12 Identity = 36/72 (50.00%), Postives = 48/72 (66.67%), Query Frame = -1 Query: 577 APASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 792 AP + IA NA +A ++ G+NA T YE+++ AG+IDPAKV R ALQNA S+AGMVLTT+A+ Sbjct: 448 APVAQIADNAGAEGAVVVENVRAGDFNYGFNAATGAYEDLVSAGIIDPAKVVRSALQNAGSIAGMVLTTEAL 519
BLAST of CX043795 vs. ExPASy Swiss-Prot
Match: CH602_SYNJA (60 kDa chaperonin 2 OS=Synechococcus sp. (strain JA-3-3Ab) GN=groL2 PE=3 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.251e-12 Identity = 38/72 (52.78%), Postives = 46/72 (63.89%), Query Frame = -1 Query: 577 APASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 792 AP IA NA K +T GY+A D Y +M +AG++DPAKVTR ALQNAAS+A MVLTT+AI Sbjct: 449 APLRRIAENAGQNGSIVLERVKEKPFTVGYDAQNDAYVDMFEAGIVDPAKVTRSALQNAASIASMVLTTEAI 520
BLAST of CX043795 vs. ExPASy Swiss-Prot
Match: CH60_THEEB (60 kDa chaperonin OS=Thermosynechococcus elongatus (strain BP-1) GN=groL PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 5.551e-12 Identity = 38/72 (52.78%), Postives = 45/72 (62.50%), Query Frame = -1 Query: 577 APASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 792 AP IA NA K + GY+A D+Y NM AG++DPAKVTR ALQNAAS+AGMVLTT+ I Sbjct: 449 APLRRIAENAGQNGAIIVERVKEKPFDVGYDAAKDEYVNMFDAGIVDPAKVTRSALQNAASIAGMVLTTECI 520
BLAST of CX043795 vs. ExPASy Swiss-Prot
Match: CH60_LACJO (60 kDa chaperonin OS=Lactobacillus johnsonii GN=groL PE=3 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 5.551e-12 Identity = 36/72 (50.00%), Postives = 48/72 (66.67%), Query Frame = -1 Query: 577 APASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 792 AP IA NA + + GYNA T+K+ENM++AG+IDP KVTR ALQNAAS+A ++LTT+A+ Sbjct: 448 APVRQIAENAGKDGAVILDHLEHEDPEVGYNAATNKWENMVKAGIIDPTKVTRSALQNAASIAALLLTTEAV 519
BLAST of CX043795 vs. ExPASy Swiss-Prot
Match: CH601_THEVL (60 kDa chaperonin 1 OS=Thermosynechococcus vulcanus GN=groL1 PE=3 SV=2) HSP 1 Score: 71.633 bits (174), Expect = 5.551e-12 Identity = 38/72 (52.78%), Postives = 45/72 (62.50%), Query Frame = -1 Query: 577 APASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 792 AP IA NA K + GY+A D+Y NM AG++DPAKVTR ALQNAAS+AGMVLTT+ I Sbjct: 449 APLRRIAENAGQNGAIIVERVKEKPFDVGYDAAKDEYVNMFDAGIVDPAKVTRSALQNAASIAGMVLTTECI 520
BLAST of CX043795 vs. ExPASy Swiss-Prot
Match: CH60_STACT (60 kDa chaperonin OS=Staphylococcus carnosus (strain TM300) GN=groL PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.250e-12 Identity = 39/72 (54.17%), Postives = 46/72 (63.89%), Query Frame = -1 Query: 577 APASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 792 AP IA NA K +E GYNA TD++ NML AG++DP KVTR ALQNAASVA M LTT+A+ Sbjct: 446 APVRQIAENAGLEGSIIVEKLKHAEPGIGYNAATDEWVNMLDAGIVDPTKVTRSALQNAASVAAMFLTTEAV 517
BLAST of CX043795 vs. ExPASy Swiss-Prot
Match: CH60_MACCJ (60 kDa chaperonin OS=Macrococcus caseolyticus (strain JCSC5402) GN=groL PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.250e-12 Identity = 38/72 (52.78%), Postives = 46/72 (63.89%), Query Frame = -1 Query: 577 APASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 792 AP IA NA K +E GYNA TD++ NM+ AG++DP KVTR ALQNAASVA M LTT+A+ Sbjct: 446 APIRQIAENAGLEGSVIVEKIKHAETGVGYNAATDEWVNMIDAGIVDPTKVTRSALQNAASVAAMFLTTEAV 517
BLAST of CX043795 vs. ExPASy Swiss-Prot
Match: CH60_BACSK (60 kDa chaperonin OS=Bacillus clausii (strain KSM-K16) GN=groL PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.250e-12 Identity = 37/71 (52.11%), Postives = 45/71 (63.38%), Query Frame = -1 Query: 577 PASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 789 P IAHNA KA E GYNA T +Y NM++ G++DP KVTR ALQNAASV+ M LTT+A+ Sbjct: 447 PVRQIAHNAGLEGSIIVEKLKAEEVGVGYNAATGEYVNMVETGILDPVKVTRSALQNAASVSAMFLTTEAV 517 The following BLAST results are available for this feature:
BLAST of CX043795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043795 ID=CX043795; Name=CX043795; organism=Citrus sinensis; type=EST; length=795bpback to top |