CX043795
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043795 vs. ExPASy Swiss-Prot
Match: CH60_LACLM (60 kDa chaperonin OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=groL PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.598e-11 Identity = 34/71 (47.89%), Postives = 48/71 (67.61%), Query Frame = -1 Query: 577 PASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 789 P IA NA ++ + TG+NA T ++ NM++ G++DPAKVTR ALQNAASVAG++LTT+A+ Sbjct: 447 PVRQIAANAGYEGSVIIDKLRSEKVGTGFNAATGQWVNMIEEGIVDPAKVTRSALQNAASVAGLILTTEAV 517
BLAST of CX043795 vs. ExPASy Swiss-Prot
Match: CH60_LACDB (60 kDa chaperonin OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) GN=groL PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.598e-11 Identity = 35/72 (48.61%), Postives = 45/72 (62.50%), Query Frame = -1 Query: 577 APASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 792 AP IA NA + + GYNA DKY NM+ G+IDP +VTR ALQNAAS+AG++LTT+A+ Sbjct: 447 APVRQIAENAGQEGSVVVDHLRKVDPEVGYNAAEDKYVNMIDEGIIDPTQVTRSALQNAASIAGLLLTTEAV 518
BLAST of CX043795 vs. ExPASy Swiss-Prot
Match: CH60_LACDA (60 kDa chaperonin OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) GN=groL PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.598e-11 Identity = 35/72 (48.61%), Postives = 45/72 (62.50%), Query Frame = -1 Query: 577 APASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 792 AP IA NA + + GYNA DKY NM+ G+IDP +VTR ALQNAAS+AG++LTT+A+ Sbjct: 447 APVRQIAENAGQEGSVVVDHLRKVDPEVGYNAAEDKYVNMIDEGIIDPTQVTRSALQNAASIAGLLLTTEAV 518
BLAST of CX043795 vs. ExPASy Swiss-Prot
Match: CH60_FLAPJ (60 kDa chaperonin OS=Flavobacterium psychrophilum (strain JIP02/86 / ATCC 49511) GN=groL PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.598e-11 Identity = 36/70 (51.43%), Postives = 43/70 (61.43%), Query Frame = -1 Query: 583 APASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQ 792 AP I NA GYNA TD+Y +ML+AG+IDP KVTR AL+NAASVAGM+LTT+ Sbjct: 449 APLRTIVENAGLEGSVVVAKVAEGSGDFGYNAKTDEYVDMLKAGIIDPKKVTRVALENAASVAGMILTTE 518
BLAST of CX043795 vs. ExPASy Swiss-Prot
Match: CH60_AKKM8 (60 kDa chaperonin OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=groL PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.598e-11 Identity = 30/44 (68.18%), Postives = 38/44 (86.36%), Query Frame = -1 Query: 577 GYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 708 GYN TDKYE++L AGV+DP KVTR ALQNAAS+AG++LTT+ + Sbjct: 476 GYNVATDKYEDLLSAGVVDPTKVTRSALQNAASIAGLLLTTECV 519
BLAST of CX043795 vs. ExPASy Swiss-Prot
Match: CH602_PROMM (60 kDa chaperonin 2 OS=Prochlorococcus marinus (strain MIT 9313) GN=groL2 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.598e-11 Identity = 38/72 (52.78%), Postives = 45/72 (62.50%), Query Frame = -1 Query: 577 APASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 792 AP IA NA K+ + GYNA T Y +ML AG++DPAKVTR LQNAAS+AGMVLTT+ I Sbjct: 449 APLMRIAENAGANGAVVAENVKSRPISDGYNAATGDYIDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520
BLAST of CX043795 vs. ExPASy Swiss-Prot
Match: CH601_PROM3 (60 kDa chaperonin 1 OS=Prochlorococcus marinus (strain MIT 9303) GN=groL1 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.598e-11 Identity = 38/72 (52.78%), Postives = 45/72 (62.50%), Query Frame = -1 Query: 577 APASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 792 AP IA NA K+ + GYNA T Y +ML AG++DPAKVTR LQNAAS+AGMVLTT+ I Sbjct: 449 APLMRIAENAGANGAVVAENVKSRPISDGYNAATGDYIDMLAAGIVDPAKVTRSGLQNAASIAGMVLTTECI 520
BLAST of CX043795 vs. ExPASy Swiss-Prot
Match: CH601_CHLCV (60 kDa chaperonin 1 OS=Chlamydophila caviae GN=groL1 PE=2 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.598e-11 Identity = 33/72 (45.83%), Postives = 48/72 (66.67%), Query Frame = -1 Query: 577 APASLIAHNAXXXXXXXXXXXKASEWTTGYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 792 AP IA NA + + GY+A+ D Y +M++AG++DP KVTRCAL++AASVAG++LTT+A+ Sbjct: 451 APLKQIAANAGKEGAIICQQVLSRSSSEGYDALRDAYTDMIEAGILDPTKVTRCALESAASVAGLLLTTEAL 522
BLAST of CX043795 vs. ExPASy Swiss-Prot
Match: CH60_BACFR (60 kDa chaperonin OS=Bacteroides fragilis GN=groL PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.700e-11 Identity = 32/44 (72.73%), Postives = 37/44 (84.09%), Query Frame = -1 Query: 577 GYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 708 GYNA TD YENM AGV+DPAKVTR AL+NAAS+AGM LTT+ + Sbjct: 477 GYNARTDVYENMHAAGVVDPAKVTRVALENAASIAGMFLTTECV 520
BLAST of CX043795 vs. ExPASy Swiss-Prot
Match: CH60_BACFN (60 kDa chaperonin OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=groL PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.700e-11 Identity = 32/44 (72.73%), Postives = 37/44 (84.09%), Query Frame = -1 Query: 577 GYNAMTDKYENMLQAGVIDPAKVTRCALQNAASVAGMVLTTQAI 708 GYNA TD YENM AGV+DPAKVTR AL+NAAS+AGM LTT+ + Sbjct: 477 GYNARTDVYENMHAAGVVDPAKVTRVALENAASIAGMFLTTECV 520 The following BLAST results are available for this feature:
BLAST of CX043795 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 85
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX043795 ID=CX043795; Name=CX043795; organism=Citrus sinensis; type=EST; length=795bpback to top |