CX043792

Overview
NameCX043792
Unique NameCX043792
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length767
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043792 vs. ExPASy Swiss-Prot
Match: RL15_PELFU (60S ribosomal protein L15 OS=Pelteobagrus fulvidraco GN=rpl15 PE=2 SV=3)

HSP 1 Score: 239.965 bits (611), Expect = 1.113e-62
Identity = 122/198 (61.62%), Postives = 138/198 (69.70%), Query Frame = 3
Query:   27 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNNT 617
            MGAY ++ +LWRKKQSDVMRFL RVRCW+YRQ  ++ R  RPTRPDKARRLGYKAKQ                       YGKP + GV Q+KF RS +SVAEERAGR  GGLRVL+SYW+ EDSTYK+FEVILVD  H AIR +P   W+   VHKHRE+RGLTSAGKK RGL GKGH  H     SRRA W+R NT
Sbjct:    1 MGAYRYMQKLWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRVRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGGLRVLSSYWVGEDSTYKFFEVILVDIFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAWRRRNT 197          
BLAST of CX043792 vs. ExPASy Swiss-Prot
Match: RL15_PARDA (60S ribosomal protein L15 OS=Paramisgurnus dabryanus GN=rpl15 PE=2 SV=3)

HSP 1 Score: 239.965 bits (611), Expect = 1.113e-62
Identity = 122/198 (61.62%), Postives = 137/198 (69.19%), Query Frame = 3
Query:   27 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNNT 617
            MGAY ++ ELWRKKQSDVMRFL RVRCW+YRQ  S+ R  +PTRPDKARRLGYKAKQ                       YGKP + GV Q+KF RS +S AEERAGR  GGLRVL+SYW+ EDSTYK+FEVILVD  H AIR +P   W+   VHKHRE+RGLTSAGKK RGL GKGH  H     SRRA W+R NT
Sbjct:    1 MGAYKYMQELWRKKQSDVMRFLLRVRCWQYRQLSSLHRTPKPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSTAEERAGRHCGGLRVLSSYWVGEDSTYKFFEVILVDIFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAWRRRNT 197          
BLAST of CX043792 vs. ExPASy Swiss-Prot
Match: RL15_DICDI (60S ribosomal protein L15 OS=Dictyostelium discoideum GN=rpl15-1 PE=1 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 4.228e-62
Identity = 121/198 (61.11%), Postives = 137/198 (69.19%), Query Frame = 3
Query:   27 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKG-HLHHKARPSRRATWKRNNT 617
            MGAY ++ EL++KKQSD +RFL RVRCWEYR  P   R + PTR DKARRLGYKA Q                        GKP   GV +LK  R+ RSVAEER GR+   LRVLNSYW+N+DSTYKY+EVILVD +HNAIRNDPR NW+C PVHKHRELRGLTSAG K RGLR KG H   K RPSR+A +KR NT
Sbjct:    1 MGAYKYLQELYKKKQSDAVRFLLRVRCWEYRNLPVCHRASHPTRVDKARRLGYKATQGFVVYRIRVRRGGRKRQVPGGRTGGKPKTHGVNELKPSRNLRSVAEERVGRRCPNLRVLNSYWVNQDSTYKYYEVILVDNSHNAIRNDPRYNWICKPVHKHRELRGLTSAGIKARGLRRKGTHRASKTRPSRQANYKRRNT 198          
BLAST of CX043792 vs. ExPASy Swiss-Prot
Match: RL15_ANOGA (60S ribosomal protein L15 OS=Anopheles gambiae GN=RpL15 PE=2 SV=3)

HSP 1 Score: 237.269 bits (604), Expect = 7.211e-62
Identity = 119/197 (60.41%), Postives = 139/197 (70.56%), Query Frame = 3
Query:   27 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA-RPSRRATWKRNN 614
            MGAY +V EL+RKKQSDVMR+L R+R W+YRQ     R  RP+RPDKARRLGYKAKQ                       YGKP + GV QLK  R  +SVAEER GR+LGGLRVLNSYW+ +D+ +KYFEVI+VDPAHNAIR DP +NW+CN VHKHRELRGLTSAGK  RGL GKG+ + +    SRRA W+R N
Sbjct:    1 MGAYRYVQELYRKKQSDVMRYLLRIRVWQYRQMTRFHRAPRPSRPDKARRLGYKAKQGFSIFRIRVRRGGRKRPVPKGCTYGKPKSHGVNQLKPYRCLQSVAEERVGRRLGGLRVLNSYWVAQDAAHKYFEVIMVDPAHNAIRRDPNVNWICNAVHKHRELRGLTSAGKSSRGL-GKGYRYSQTIGGSRRACWRRRN 196          
BLAST of CX043792 vs. ExPASy Swiss-Prot
Match: RL15_CHITE (60S ribosomal protein L15 OS=Chironomus tentans GN=RpL15 PE=3 SV=3)

HSP 1 Score: 236.113 bits (601), Expect = 1.607e-61
Identity = 115/197 (58.38%), Postives = 141/197 (71.57%), Query Frame = 3
Query:   27 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA-RPSRRATWKRNN 614
            MGAY +V EL+RKKQSDV+R+L RVRCW+YRQ   + R  RP+RPDKARRLGYKAKQ                       YGKP + GV QLK  R+ +SVAEER GR++GGLRVLNSYW+ +D+ +KY+EVI VDP HNA+R DP++NW+CN VHKHRELRGLTSAGK  RG+ GKG+ + +    SRRA W+R N
Sbjct:    1 MGAYRYVQELYRKKQSDVLRYLLRVRCWQYRQLTKLHRAPRPSRPDKARRLGYKAKQGFLIYRIRVRRGGRKRPVHKGCTYGKPKSHGVNQLKPYRNLQSVAEERVGRRMGGLRVLNSYWVAQDAAFKYYEVICVDPFHNAVRRDPKVNWVCNAVHKHRELRGLTSAGKSSRGV-GKGYRYSQTIGGSRRAAWRRKN 196          
BLAST of CX043792 vs. ExPASy Swiss-Prot
Match: RL15B_SCHPO (60S ribosomal protein L15-B OS=Schizosaccharomyces pombe GN=rpl15b PE=1 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.360e-60
Identity = 118/197 (59.90%), Postives = 137/197 (69.54%), Query Frame = 3
Query:   27 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNNT 617
            MGAY ++ EL +KKQSDV  FL RVR WEYRQ   I R +RP+RPDKARRLGYKAKQ                       YGKP +QGV  LK+QRS R  AEER GR    LRVLNSYW+N+D+TYK+FEVILVDP+H AIR DPRINW+ NPVHKHRE RGLTS GKK RG+ GKGH ++ +   + ATW R+NT
Sbjct:    1 MGAYKYLEELAKKKQSDVNLFLSRVRAWEYRQMNVIHRASRPSRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGQTYGKPVHQGVNHLKYQRSARCTAEERVGRYCSNLRVLNSYWVNQDATYKFFEVILVDPSHKAIRRDPRINWIVNPVHKHRESRGLTSIGKKSRGI-GKGHRYNNS--PQHATWLRHNT 194          
BLAST of CX043792 vs. ExPASy Swiss-Prot
Match: RL15A_SCHPO (60S ribosomal protein L15-A OS=Schizosaccharomyces pombe GN=rpl15a PE=2 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 3.030e-60
Identity = 118/197 (59.90%), Postives = 136/197 (69.04%), Query Frame = 3
Query:   27 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNNT 617
            MGAY ++ EL +KKQSDV  FL RVR WEYRQ   I R +RP+RPDKARRLGYKAKQ                       YGKP +QGV  LK+QRS R  AEER GR    LRVLNSYW+N+D+TYK+FEVILVDP+H AIR DPRINW+ NPVHKHRE RGLTS GKK RG+ GKGH  + +   + ATW R+NT
Sbjct:    1 MGAYKYLEELAKKKQSDVNLFLSRVRAWEYRQMNVIHRASRPSRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGQTYGKPVHQGVNHLKYQRSARCTAEERVGRYCSNLRVLNSYWVNQDATYKFFEVILVDPSHKAIRRDPRINWIVNPVHKHRESRGLTSIGKKSRGI-GKGHRFNNS--PQHATWLRHNT 194          
BLAST of CX043792 vs. ExPASy Swiss-Prot
Match: RL15_DROME (60S ribosomal protein L15 OS=Drosophila melanogaster GN=RpL15 PE=2 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 3.957e-60
Identity = 116/197 (58.88%), Postives = 139/197 (70.56%), Query Frame = 3
Query:   27 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA-RPSRRATWKRNN 614
            MGAY ++ EL+RKKQSDVMR+L R+R W+YRQ   + R  RPTRPDKARRLGY+AKQ                       YGKP + GV QLK  R  +S+AEER GR+LGGLRVLNSYWI +D++YKYFEVIL+D  H+AIR DP+INW+C  VHKHRELRGLTSAGK  RG+ GKG+ + +    SRRA WKR N
Sbjct:    1 MGAYRYMQELYRKKQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQGFVIYRIRVRRGGRKRPVPKGCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYWIAQDASYKYFEVILIDTHHSAIRRDPKINWICKHVHKHRELRGLTSAGKSSRGI-GKGYRYSQTIGGSRRAAWKRKN 196          
BLAST of CX043792 vs. ExPASy Swiss-Prot
Match: RL15_CAEEL (60S ribosomal protein L15 OS=Caenorhabditis elegans GN=rpl-15 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.032e-56
Identity = 109/198 (55.05%), Postives = 133/198 (67.17%), Query Frame = 3
Query:   27 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA-TWKRNNT 617
            MGAY ++ E+WRKKQSD +R+L R+R W YRQ  ++ RV RPTRP+KARRLGY+AKQ                       YGKP   GV +LK  +SK++VAE RAGR+LG LRVLNSYW+ EDSTYK++EV+L+DP H AIR +P   W+  PVHKHRE RGLTSAG+K RGL GKG      R   +A  WKR NT
Sbjct:    1 MGAYKYMQEIWRKKQSDALRYLLRIRTWHYRQLSAVHRVPRPTRPEKARRLGYRAKQGFVVYRVRVRRGNRKRPVCKGQTYGKPKTHGVNELKNAKSKQAVAEGRAGRRLGSLRVLNSYWVAEDSTYKFYEVVLIDPFHKAIRRNPDTQWITKPVHKHREQRGLTSAGRKSRGL-GKGWRFSATRGGSQAKNWKRKNT 197          
BLAST of CX043792 vs. ExPASy Swiss-Prot
Match: RL15_ORCLI (60S ribosomal protein L15 OS=Orconectes limosus GN=RPL15 PE=2 SV=3)

HSP 1 Score: 218.394 bits (555), Expect = 3.466e-56
Identity = 108/197 (54.82%), Postives = 130/197 (65.99%), Query Frame = 3
Query:   27 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNNT 617
            MGAY ++ E++RKKQSDVMRFL R+R W+YR    + R  RPTRP+KARRLGYKAKQ                       YGKP + GV QLK  R+ +S+AEER GR+LGGLRVLNSYW+ +DSTYKYFEVILVD  HN IR    +NW+C    KHRE+RG TSAG+K+RGL    H       SRR+ W R+NT
Sbjct:    1 MGAYKYMQEIYRKKQSDVMRFLLRIRAWQYRHLNKLHRAPRPTRPEKARRLGYKAKQGFVIYRIRIRRGGRKRPVPKGATYGKPKSHGVNQLKPTRNLQSLAEERTGRRLGGLRVLNSYWVAQDSTYKYFEVILVDIRHNVIRKSGSLNWICKHTQKHREMRGKTSAGRKHRGLGRGFHYSQTKGGSRRSCWLRHNT 197          
The following BLAST results are available for this feature:
BLAST of CX043792 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
RL15_PELFU1.113e-6261.6260S ribosomal protein L15 OS=Pelteobagrus fulvidra... [more]
RL15_PARDA1.113e-6261.6260S ribosomal protein L15 OS=Paramisgurnus dabryan... [more]
RL15_DICDI4.228e-6261.1160S ribosomal protein L15 OS=Dictyostelium discoid... [more]
RL15_ANOGA7.211e-6260.4160S ribosomal protein L15 OS=Anopheles gambiae GN=... [more]
RL15_CHITE1.607e-6158.3860S ribosomal protein L15 OS=Chironomus tentans GN... [more]
RL15B_SCHPO1.360e-6059.9060S ribosomal protein L15-B OS=Schizosaccharomyces... [more]
RL15A_SCHPO3.030e-6059.9060S ribosomal protein L15-A OS=Schizosaccharomyces... [more]
RL15_DROME3.957e-6058.8860S ribosomal protein L15 OS=Drosophila melanogast... [more]
RL15_CAEEL2.032e-5655.0560S ribosomal protein L15 OS=Caenorhabditis elegan... [more]
RL15_ORCLI3.466e-5654.8260S ribosomal protein L15 OS=Orconectes limosus GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_13D10_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-13D10-H19-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043792 ID=CX043792; Name=CX043792; organism=Citrus sinensis; type=EST; length=767bp
GCGCATCTCAGCTCAGCTCAGAGCCAATGGGGGCTTACACGTTCGTGTCG
GAGCTATGGAGGAAGAAGCAGTCAGATGTGATGAGGTTCTTGCAGAGGGT
GAGGTGTTGGGAGTACCGCCAACATCCATCTATTGTTAGGGTCACCCGTC
CCACTCGACCTGACAAGGCTCGACGCTTGGGTTACAAGGCCAAGCAGGGT
TATGTTGTTTATCGTGTGCGGGTAAGGCGCGGTGGTCGGAAGAGGCCTGT
TCCCAAGGGCATTGTGTATGGTAAACCCACAAACCAGGGTGTTACTCAAC
TGAAGTTTCAGCGCAGCAAGAGGTCTGTTGCAGAGGAGCGTGCCGGTCGT
AAGTTGGGAGGTCTTAGGGTTCTCAATTCTTACTGGATCAATGAGGACTC
CACTTATAAGTACTTTGAGGTGATCTTGGTTGATCCTGCTCATAATGCCA
TCCGTAATGACCCAAGAATTAATTGGTTATGCAATCCTGTCCATAAGCAC
AGGGAACTCCGTGGTCTTACTTCTGCAGGTAAGAAGTACAGAGGCCTACG
TGGAAAAGGACACTTGCACCACAAGGCTCGGCCTTCGCGCAGGGCTACCT
GGAAGAGAAACAATACTCTTTCCCTCCGTCGCTACCGTTGATCATTGTTA
CGGTTTTGATGTTTATCATCAGTTGAGGGATTTTGTCTGGAGGACATAGT
AGTTGCCATTTTGAGTCTTTTAGAGATTGAAATACTATGGAACATATCTT
ATTTTGAAACCGTACAT
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