CX043792
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043792 vs. ExPASy Swiss-Prot
Match: RL15E_PYRAB (50S ribosomal protein L15e OS=Pyrococcus abyssi GN=rpl15e PE=3 SV=1) HSP 1 Score: 153.295 bits (386), Expect = 1.369e-36 Identity = 82/190 (43.16%), Postives = 110/190 (57.89%), Query Frame = 3 Query: 27 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 596 MG Y ++ E W+ + + L + R ++R+ P++VR+ RPTR D+AR LGY+AKQ KP+ G + ++S + +AEE+A RK L VLNSYW+ ED YK+FEVI+VDP H I++DP+I W+ HK R RGLTSAGKK RGLR KG K RPS RA Sbjct: 1 MGMYKYIREAWKSPKKSYVGQLLKQRMIKWRREPAVVRIERPTRLDRARALGYQAKQGYVIVRVRVRRGGRKRPRWKG--GRKPSKMGQVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVIKSDPKIAWIALKHHKGRVFRGLTSAGKKGRGLRNKGKGAEKIRPSIRA 188
BLAST of CX043792 vs. ExPASy Swiss-Prot
Match: RL15E_PYRFU (50S ribosomal protein L15e OS=Pyrococcus furiosus GN=rpl15e PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.336e-36 Identity = 82/190 (43.16%), Postives = 109/190 (57.37%), Query Frame = 3 Query: 27 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 596 MG Y ++ E W+ + + L + R ++R+ P +VR+ RPTR D+AR LGY+AKQ KP+ G + ++S + +AEE+A RK L VLNSYW+ ED YK+FEVI+VDP H I++DP+I W+ HK R RGLTSAGKK RGLR KG K RPS RA Sbjct: 1 MGMYKYIREAWKSPKKSYVGELLKQRMIKWRREPVVVRIERPTRLDRARALGYQAKQGYVIVRVRVRKGGRKRPRWKG--GRKPSKMGQVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVIKSDPKIAWIALKHHKGRVFRGLTSAGKKGRGLRNKGKGAEKVRPSIRA 188
BLAST of CX043792 vs. ExPASy Swiss-Prot
Match: RL15E_PYRKO (50S ribosomal protein L15e OS=Pyrococcus kodakaraensis GN=rpl15e PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.159e-35 Identity = 79/190 (41.58%), Postives = 108/190 (56.84%), Query Frame = 3 Query: 27 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA 596 MG Y ++ E W+ + + L + R ++R+ P + R+ RPTR D+AR LGY+AKQ KP+ G+ + ++S + +AEE+A RK L VLNSYW+ ED YK+FEVI+VDP H I++DP+I W+ HK R RGLTSAGK+ RGL KG K RPS RA Sbjct: 1 MGMYKYIREAWKSPKKSYVGELLKKRMIQWRRDPVVKRIERPTRLDRARSLGYQAKQGYVVVRVRVRRGGRKRPRWKG--GRKPSKMGMVKYSPKKSLQWIAEEKAARKFPNLEVLNSYWVGEDGMYKWFEVIMVDPHHPVIKSDPKIAWIAGKAHKGRVFRGLTSAGKRSRGLLNKGKGAEKVRPSIRA 188
BLAST of CX043792 vs. ExPASy Swiss-Prot
Match: RL15E_METMP (50S ribosomal protein L15e OS=Methanococcus maripaludis GN=rpl15e PE=3 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.514e-35 Identity = 79/194 (40.72%), Postives = 109/194 (56.19%), Query Frame = 3 Query: 27 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKR 608 M Y +V E W+ + ++ LQ R ++R+ PS++R+ RPTR D+AR LGYKAKQ KP G+ ++ +S + +AEERA ++ + VLNSYW+ +D K++E+ILVDP H +I+ND +WL HK R RGLTSAGKK RGL KG KARP RA K+ Sbjct: 1 MSMYNYVKEAWKVPANSYVKELQWARMQDWRKEPSVLRIERPTRIDRARNLGYKAKQGIVVVRVSVRRGGLRKPRPKHSK--KPATLGINKITMAKSIQRIAEERAAKRYPNMEVLNSYWVGQDGKQKWYEIILVDPCHPSIKNDKSYSWLSTGNHKGRANRGLTSAGKKGRGLMYKGKGAEKARPGVRANGKK 192
BLAST of CX043792 vs. ExPASy Swiss-Prot
Match: RL15E_STAMF (50S ribosomal protein L15e OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=rpl15e PE=3 SV=1) HSP 1 Score: 147.902 bits (372), Expect = 5.754e-35 Identity = 81/193 (41.97%), Postives = 108/193 (55.96%), Query Frame = 3 Query: 30 GAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKR 608 G Y ++++LW++ M L R R ++R+ P+I+R+ +PTR D+AR LGYKAKQ +P G+ +S R +AEERA RK L VLNSY++ ED YK++EVILVDP H AI NDP I W+C H+ R RGLTSAGKK RGLR L + + + WKR Sbjct: 4 GMYHYIAQLWKRPYEGDMLTLMRQRLIKWRREPAIIRIEKPTRLDRARALGYKAKQGFIIVRVRVRKGGLRKQRPNK--GRRPKRMGIYGFAPSKSLRLIAEERAARKYPNLEVLNSYYVGEDGNYKWYEVILVDPHHPAICNDPDIKWICEKQHRRRVFRGLTSAGKKMRGLRKSRGLKY----TIKYKWKR 190
BLAST of CX043792 vs. ExPASy Swiss-Prot
Match: RL15E_DESK1 (50S ribosomal protein L15e OS=Desulfurococcus kamchatkensis (strain 1221n / DSM 18924) GN=rpl15e PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.871e-34 Identity = 84/195 (43.08%), Postives = 112/195 (57.44%), Query Frame = 3 Query: 36 YTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRG----KGHLHHKARPSRRATWKR 608 Y +++E W++K + + L R R E+R+ PS+VR+ +PTR DKAR LGYKAK +P GV +S R +AEERA RK GL VLNSY++ ED YK++EVILVDP H +I NDP +NW+C P ++ R RGLTSAGKK RGLR +G +++K WKR Sbjct: 6 YHYIAEAWKEKSRE-LEALIRQRLIEWRREPSVVRLEKPTRLDKARALGYKAKVGFIIVRVRVRKGGQRKPRPDS--GRRPKRMGVYGYAPAKSLRLIAEERAARKFPGLEVLNSYYVAEDGRYKWYEVILVDPHHPSICNDPDVNWICEPQNRGRVFRGLTSAGKKMRGLRKSRGLRGTVYYK--------WKR 189
BLAST of CX043792 vs. ExPASy Swiss-Prot
Match: RL15E_METKA (50S ribosomal protein L15e OS=Methanopyrus kandleri GN=rpl15e PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 6.362e-34 Identity = 79/196 (40.31%), Postives = 108/196 (55.10%), Query Frame = 3 Query: 21 EPMGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKR 608 + + Y + E W++ + + L + R ++R+ PS+ R+ RPTR ++ARRLGY+AK +P G + +SK+ +AEERA RK L VLNSYW+ ED YKY+EVI+VDP H I++D RINW+C K R RG T AGKK RGLR +G K RPS RA +R Sbjct: 2 DAVSMYKYQREAWKRPKDSYVGELLKERLPKWRKGPSVQRIKRPTRIERARRLGYRAKPGYVVVRVRVPKGGRRKSRPKK--GRRPKRMGKNKFSPGKSKQWIAEERAQRKYPNLEVLNSYWVGEDGQYKYYEVIMVDPYHPQIKSDHRINWICQKSQKGRVFRGKTGAGKKARGLRKRGKGAEKVRPSLRAHRRR 195
BLAST of CX043792 vs. ExPASy Swiss-Prot
Match: RL15E_AERPE (50S ribosomal protein L15e OS=Aeropyrum pernix GN=rpl15e PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.417e-33 Identity = 82/192 (42.71%), Postives = 107/192 (55.73%), Query Frame = 3 Query: 27 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLH--HKARPSRRA 596 + Y +++ W+K + L + R E+R+ PSI+RV +PTR D+AR LGYKAKQ +P GV +S R +AEERA RK L VLNSY++ ED YK++EVILVDP H AI+NDP +NW+ HK R RGLTSAGKK RGLR L HK + ++A Sbjct: 3 LSMYHYIAREWKKPYEGLHGELMKARLLEWRRQPSILRVEKPTRLDRARALGYKAKQGVIVARVRVRKGGRRKPRPNK--GRRPKRMGVYGFAPAKSLRLIAEERAQRKYPNLVVLNSYYVGEDGRYKWYEVILVDPNHPAIKNDPELNWVTTGKHKGRPFRGLTSAGKKMRGLRKSRGLKGTHKYKWKKKA 192
BLAST of CX043792 vs. ExPASy Swiss-Prot
Match: RL15E_HALSA (50S ribosomal protein L15e OS=Halobacterium salinarium GN=rpl15e PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.157e-33 Identity = 81/195 (41.54%), Postives = 109/195 (55.90%), Query Frame = 3 Query: 36 YTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTN-QGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNNT 617 Y+ + E W + LQ R ++R+ +I RV RPTR DKAR LGYKAKQ G+ T QGV ++ ++ + +AEERA RK LR LNSYW+ ED + K+FE IL+DP H AI+ND +NW+C+ HK+R RG TSAG++ RGL+ +G RPS A KRN + Sbjct: 6 YSHIKEAWEDPDDGKLAELQWQRKQDWRKEGAIERVDRPTRLDKARELGYKAKQGVVVVRVSVRKGTARKSRFKA---GRRTKRQGVNRIGRAKNLQRIAEERASRKYVNLRTLNSYWVGEDGSQKWFEAILLDPEHGAIQNDDDLNWICDDSHKNRVFRGKTSAGRRARGLQNRGKGTEGLRPSTNAD-KRNKS 196
BLAST of CX043792 vs. ExPASy Swiss-Prot
Match: RL15E_HALS3 (50S ribosomal protein L15e OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=rpl15e PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.157e-33 Identity = 81/195 (41.54%), Postives = 109/195 (55.90%), Query Frame = 3 Query: 36 YTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXXIVYGKPTN-QGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNNT 617 Y+ + E W + LQ R ++R+ +I RV RPTR DKAR LGYKAKQ G+ T QGV ++ ++ + +AEERA RK LR LNSYW+ ED + K+FE IL+DP H AI+ND +NW+C+ HK+R RG TSAG++ RGL+ +G RPS A KRN + Sbjct: 6 YSHIKEAWEDPDDGKLAELQWQRKQDWRKEGAIERVDRPTRLDKARELGYKAKQGVVVVRVSVRKGTARKSRFKA---GRRTKRQGVNRIGRAKNLQRIAEERASRKYVNLRTLNSYWVGEDGSQKWFEAILLDPEHGAIQNDDDLNWICDDSHKNRVFRGKTSAGRRARGLQNRGKGTEGLRPSTNAD-KRNKS 196 The following BLAST results are available for this feature:
BLAST of CX043792 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 93
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX043792 ID=CX043792; Name=CX043792; organism=Citrus sinensis; type=EST; length=767bpback to top |