CX043791

Overview
NameCX043791
Unique NameCX043791
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length868
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043791 vs. ExPASy Swiss-Prot
Match: RL15_PELFU (60S ribosomal protein L15 OS=Pelteobagrus fulvidraco GN=rpl15 PE=2 SV=3)

HSP 1 Score: 239.965 bits (611), Expect = 1.354e-62
Identity = 123/198 (62.12%), Postives = 139/198 (70.20%), Query Frame = -1
Query:  266 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNNT 856
            MGAY ++ +LWRKKQSDVMRFL RVRCW+YRQ  ++ R  RPTRPDKARRLGYKAKQ                    G  YGKP + GV Q+KF RS +SVAEERAGR  GGLRVL+SYW+ EDSTYK+FEVILVD  H AIR +P   W+   VHKHRE+RGLTSAGKK RGL GKGH  H     SRRA W+R NT
Sbjct:    1 MGAYRYMQKLWRKKQSDVMRFLLRVRCWQYRQLSALHRAPRPTRPDKARRLGYKAKQGYVIYRVRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSVAEERAGRHCGGLRVLSSYWVGEDSTYKFFEVILVDIFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAWRRRNT 197          
BLAST of CX043791 vs. ExPASy Swiss-Prot
Match: RL15_PARDA (60S ribosomal protein L15 OS=Paramisgurnus dabryanus GN=rpl15 PE=2 SV=3)

HSP 1 Score: 239.965 bits (611), Expect = 1.354e-62
Identity = 123/198 (62.12%), Postives = 138/198 (69.70%), Query Frame = -1
Query:  266 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGH-LHHKARPSRRATWKRNNT 856
            MGAY ++ ELWRKKQSDVMRFL RVRCW+YRQ  S+ R  +PTRPDKARRLGYKAKQ                    G  YGKP + GV Q+KF RS +S AEERAGR  GGLRVL+SYW+ EDSTYK+FEVILVD  H AIR +P   W+   VHKHRE+RGLTSAGKK RGL GKGH  H     SRRA W+R NT
Sbjct:    1 MGAYKYMQELWRKKQSDVMRFLLRVRCWQYRQLSSLHRTPKPTRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGATYGKPVHHGVNQIKFARSLQSTAEERAGRHCGGLRVLSSYWVGEDSTYKFFEVILVDIFHKAIRRNPDTQWITKAVHKHREMRGLTSAGKKSRGL-GKGHKFHLTIGGSRRAAWRRRNT 197          
BLAST of CX043791 vs. ExPASy Swiss-Prot
Match: RL15_DICDI (60S ribosomal protein L15 OS=Dictyostelium discoideum GN=rpl15-1 PE=1 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 5.144e-62
Identity = 122/198 (61.62%), Postives = 138/198 (69.70%), Query Frame = -1
Query:  266 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKG-HLHHKARPSRRATWKRNNT 856
            MGAY ++ EL++KKQSD +RFL RVRCWEYR  P   R + PTR DKARRLGYKA Q                    G   GKP   GV +LK  R+ RSVAEER GR+   LRVLNSYW+N+DSTYKY+EVILVD +HNAIRNDPR NW+C PVHKHRELRGLTSAG K RGLR KG H   K RPSR+A +KR NT
Sbjct:    1 MGAYKYLQELYKKKQSDAVRFLLRVRCWEYRNLPVCHRASHPTRVDKARRLGYKATQGFVVYRIRVRRGGRKRQVPGGRTGGKPKTHGVNELKPSRNLRSVAEERVGRRCPNLRVLNSYWVNQDSTYKYYEVILVDNSHNAIRNDPRYNWICKPVHKHRELRGLTSAGIKARGLRRKGTHRASKTRPSRQANYKRRNT 198          
BLAST of CX043791 vs. ExPASy Swiss-Prot
Match: RL15_ANOGA (60S ribosomal protein L15 OS=Anopheles gambiae GN=RpL15 PE=2 SV=3)

HSP 1 Score: 237.269 bits (604), Expect = 8.774e-62
Identity = 120/197 (60.91%), Postives = 140/197 (71.07%), Query Frame = -1
Query:  269 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA-RPSRRATWKRNN 856
            MGAY +V EL+RKKQSDVMR+L R+R W+YRQ     R  RP+RPDKARRLGYKAKQ                    G  YGKP + GV QLK  R  +SVAEER GR+LGGLRVLNSYW+ +D+ +KYFEVI+VDPAHNAIR DP +NW+CN VHKHRELRGLTSAGK  RGL GKG+ + +    SRRA W+R N
Sbjct:    1 MGAYRYVQELYRKKQSDVMRYLLRIRVWQYRQMTRFHRAPRPSRPDKARRLGYKAKQGFSIFRIRVRRGGRKRPVPKGCTYGKPKSHGVNQLKPYRCLQSVAEERVGRRLGGLRVLNSYWVAQDAAHKYFEVIMVDPAHNAIRRDPNVNWICNAVHKHRELRGLTSAGKSSRGL-GKGYRYSQTIGGSRRACWRRRN 196          
BLAST of CX043791 vs. ExPASy Swiss-Prot
Match: RL15_CHITE (60S ribosomal protein L15 OS=Chironomus tentans GN=RpL15 PE=3 SV=3)

HSP 1 Score: 236.113 bits (601), Expect = 1.955e-61
Identity = 116/197 (58.88%), Postives = 142/197 (72.08%), Query Frame = -1
Query:  269 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA-RPSRRATWKRNN 856
            MGAY +V EL+RKKQSDV+R+L RVRCW+YRQ   + R  RP+RPDKARRLGYKAKQ                    G  YGKP + GV QLK  R+ +SVAEER GR++GGLRVLNSYW+ +D+ +KY+EVI VDP HNA+R DP++NW+CN VHKHRELRGLTSAGK  RG+ GKG+ + +    SRRA W+R N
Sbjct:    1 MGAYRYVQELYRKKQSDVLRYLLRVRCWQYRQLTKLHRAPRPSRPDKARRLGYKAKQGFLIYRIRVRRGGRKRPVHKGCTYGKPKSHGVNQLKPYRNLQSVAEERVGRRMGGLRVLNSYWVAQDAAFKYYEVICVDPFHNAVRRDPKVNWVCNAVHKHRELRGLTSAGKSSRGV-GKGYRYSQTIGGSRRAAWRRKN 196          
BLAST of CX043791 vs. ExPASy Swiss-Prot
Match: RL15B_SCHPO (60S ribosomal protein L15-B OS=Schizosaccharomyces pombe GN=rpl15b PE=1 SV=1)

HSP 1 Score: 233.032 bits (593), Expect = 1.655e-60
Identity = 119/197 (60.41%), Postives = 138/197 (70.05%), Query Frame = -1
Query:  266 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNNT 856
            MGAY ++ EL +KKQSDV  FL RVR WEYRQ   I R +RP+RPDKARRLGYKAKQ                    G  YGKP +QGV  LK+QRS R  AEER GR    LRVLNSYW+N+D+TYK+FEVILVDP+H AIR DPRINW+ NPVHKHRE RGLTS GKK RG+ GKGH ++ +   + ATW R+NT
Sbjct:    1 MGAYKYLEELAKKKQSDVNLFLSRVRAWEYRQMNVIHRASRPSRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGQTYGKPVHQGVNHLKYQRSARCTAEERVGRYCSNLRVLNSYWVNQDATYKFFEVILVDPSHKAIRRDPRINWIVNPVHKHRESRGLTSIGKKSRGI-GKGHRYNNS--PQHATWLRHNT 194          
BLAST of CX043791 vs. ExPASy Swiss-Prot
Match: RL15A_SCHPO (60S ribosomal protein L15-A OS=Schizosaccharomyces pombe GN=rpl15a PE=2 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 3.686e-60
Identity = 119/197 (60.41%), Postives = 137/197 (69.54%), Query Frame = -1
Query:  266 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNNT 856
            MGAY ++ EL +KKQSDV  FL RVR WEYRQ   I R +RP+RPDKARRLGYKAKQ                    G  YGKP +QGV  LK+QRS R  AEER GR    LRVLNSYW+N+D+TYK+FEVILVDP+H AIR DPRINW+ NPVHKHRE RGLTS GKK RG+ GKGH  + +   + ATW R+NT
Sbjct:    1 MGAYKYLEELAKKKQSDVNLFLSRVRAWEYRQMNVIHRASRPSRPDKARRLGYKAKQGYVIYRIRVRRGGRKRPVPKGQTYGKPVHQGVNHLKYQRSARCTAEERVGRYCSNLRVLNSYWVNQDATYKFFEVILVDPSHKAIRRDPRINWIVNPVHKHRESRGLTSIGKKSRGI-GKGHRFNNS--PQHATWLRHNT 194          
BLAST of CX043791 vs. ExPASy Swiss-Prot
Match: RL15_DROME (60S ribosomal protein L15 OS=Drosophila melanogaster GN=RpL15 PE=2 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 4.814e-60
Identity = 117/197 (59.39%), Postives = 140/197 (71.07%), Query Frame = -1
Query:  269 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKA-RPSRRATWKRNN 856
            MGAY ++ EL+RKKQSDVMR+L R+R W+YRQ   + R  RPTRPDKARRLGY+AKQ                    G  YGKP + GV QLK  R  +S+AEER GR+LGGLRVLNSYWI +D++YKYFEVIL+D  H+AIR DP+INW+C  VHKHRELRGLTSAGK  RG+ GKG+ + +    SRRA WKR N
Sbjct:    1 MGAYRYMQELYRKKQSDVMRYLLRIRVWQYRQLTKLHRSPRPTRPDKARRLGYRAKQGFVIYRIRVRRGGRKRPVPKGCTYGKPKSHGVNQLKPYRGLQSIAEERVGRRLGGLRVLNSYWIAQDASYKYFEVILIDTHHSAIRRDPKINWICKHVHKHRELRGLTSAGKSSRGI-GKGYRYSQTIGGSRRAAWKRKN 196          
BLAST of CX043791 vs. ExPASy Swiss-Prot
Match: RL15_CAEEL (60S ribosomal protein L15 OS=Caenorhabditis elegans GN=rpl-15 PE=2 SV=1)

HSP 1 Score: 219.164 bits (557), Expect = 2.473e-56
Identity = 110/198 (55.56%), Postives = 134/198 (67.68%), Query Frame = -1
Query:  266 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRA-TWKRNNT 856
            MGAY ++ E+WRKKQSD +R+L R+R W YRQ  ++ RV RPTRP+KARRLGY+AKQ                    G  YGKP   GV +LK  +SK++VAE RAGR+LG LRVLNSYW+ EDSTYK++EV+L+DP H AIR +P   W+  PVHKHRE RGLTSAG+K RGL GKG      R   +A  WKR NT
Sbjct:    1 MGAYKYMQEIWRKKQSDALRYLLRIRTWHYRQLSAVHRVPRPTRPEKARRLGYRAKQGFVVYRVRVRRGNRKRPVCKGQTYGKPKTHGVNELKNAKSKQAVAEGRAGRRLGSLRVLNSYWVAEDSTYKFYEVVLIDPFHKAIRRNPDTQWITKPVHKHREQRGLTSAGRKSRGL-GKGWRFSATRGGSQAKNWKRKNT 197          
BLAST of CX043791 vs. ExPASy Swiss-Prot
Match: RL15_ORCLI (60S ribosomal protein L15 OS=Orconectes limosus GN=RPL15 PE=2 SV=3)

HSP 1 Score: 218.394 bits (555), Expect = 4.217e-56
Identity = 109/197 (55.33%), Postives = 131/197 (66.50%), Query Frame = -1
Query:  266 MGAYTFVSELWRKKQSDVMRFLQRVRCWEYRQHPSIVRVTRPTRPDKARRLGYKAKQXXXXXXXXXXXXXXXXXXXXGIVYGKPTNQGVTQLKFQRSKRSVAEERAGRKLGGLRVLNSYWINEDSTYKYFEVILVDPAHNAIRNDPRINWLCNPVHKHRELRGLTSAGKKYRGLRGKGHLHHKARPSRRATWKRNNT 856
            MGAY ++ E++RKKQSDVMRFL R+R W+YR    + R  RPTRP+KARRLGYKAKQ                    G  YGKP + GV QLK  R+ +S+AEER GR+LGGLRVLNSYW+ +DSTYKYFEVILVD  HN IR    +NW+C    KHRE+RG TSAG+K+RGL    H       SRR+ W R+NT
Sbjct:    1 MGAYKYMQEIYRKKQSDVMRFLLRIRAWQYRHLNKLHRAPRPTRPEKARRLGYKAKQGFVIYRIRIRRGGRKRPVPKGATYGKPKSHGVNQLKPTRNLQSLAEERTGRRLGGLRVLNSYWVAQDSTYKYFEVILVDIRHNVIRKSGSLNWICKHTQKHREMRGKTSAGRKHRGLGRGFHYSQTKGGSRRSCWLRHNT 197          
The following BLAST results are available for this feature:
BLAST of CX043791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
RL15_PELFU1.354e-6262.1260S ribosomal protein L15 OS=Pelteobagrus fulvidra... [more]
RL15_PARDA1.354e-6262.1260S ribosomal protein L15 OS=Paramisgurnus dabryan... [more]
RL15_DICDI5.144e-6261.6260S ribosomal protein L15 OS=Dictyostelium discoid... [more]
RL15_ANOGA8.774e-6260.9160S ribosomal protein L15 OS=Anopheles gambiae GN=... [more]
RL15_CHITE1.955e-6158.8860S ribosomal protein L15 OS=Chironomus tentans GN... [more]
RL15B_SCHPO1.655e-6060.4160S ribosomal protein L15-B OS=Schizosaccharomyces... [more]
RL15A_SCHPO3.686e-6060.4160S ribosomal protein L15-A OS=Schizosaccharomyces... [more]
RL15_DROME4.814e-6059.3960S ribosomal protein L15 OS=Drosophila melanogast... [more]
RL15_CAEEL2.473e-5655.5660S ribosomal protein L15 OS=Caenorhabditis elegan... [more]
RL15_ORCLI4.217e-5655.3360S ribosomal protein L15 OS=Orconectes limosus GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_13D10_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-13D10-H19-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043791 ID=CX043791; Name=CX043791; organism=Citrus sinensis; type=EST; length=868bp
TTTTTTTTTTTTTTTTTGACGAAACAAATACTCAACAAGACCTTAAACAG
AATGAGACATTTAAGGCTCTTATAATTCAAGGTAGACTCAAGAAACACAA
ATGTCTTAATTTAGAATGTACGGTTTCAAAATAAGATATGTTCCATAGTA
TTTCAATCTCTAAAAGACTCAAAATGGCAACTACTATGTCCTCCAGACAA
AATCCCTCAACTGATGATAAACATCAAAACCGTAACAATGATCAACGGTA
GCGACGGAGGGAAAGAGTATTGTTTCTCTTCCAGGTAGCCCTGCGCGAAG
GCCGAGCCTTGTGGTGCAAGTGTCCTTTTCCACGTAGGCCTCTGTACTTC
TTACCTGCAGAAGTAAGACCACGGAGTTCCCTGTGCTTATGGACAGGATT
GCATAACCAATTAATTCTTGGGTCATTACGGATGGCATTATGAGCAGGAT
CAACCAAGATCACCTCAAAGTACTTATAAGTGGAGTCCTCATTGATCCAG
TAAGAATTGAGAACCCTAAGACCTCCCAACTTACGACCGGCACGCTCCTC
TGCAACAGACCTCTTGCTGCGCTGAAACTTCAGTTGAGTAACACCCTGGT
TTGTGGGTTTACCATACACAATGCCCTTGGGAACAGGCCTCTTCCGACCA
CCGCGCCTTACCCGCACACGATAAACAACATAACCCTGCTTGGCCTTGTA
ACCCAAGCGTCGAGCCTTGTCAGGTCGAGTGGGACGGGTGACCCTAACAA
TAGATGGATGTTGGCGGTACTCCCAACACCTCACCCTCTGCAAGAACCTC
ATCACATCTGACTGCTTCTTCCTCCATAGCTCCGACACGAACGTGTAAGC
CCCCATTGGCTCTGAGCT
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