CX043789

Overview
NameCX043789
Unique NameCX043789
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length863
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043789 vs. ExPASy Swiss-Prot
Match: PDIA1_HUMAN (Protein disulfide-isomerase OS=Homo sapiens GN=P4HB PE=1 SV=3)

HSP 1 Score: 97.4413 bits (241), Expect = 1.072e-19
Identity = 52/147 (35.37%), Postives = 86/147 (58.50%), Query Frame = -2
Query:  401 LDADQIAPWVKEYKEGKVPPFRKSXXXXXXXXXXXXXXVAD-SLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTV-PYEGDRTKEDIVDFIENNRDKAA 832
            L A++I  +   + EGK+ P   S              +   + +D+ F+  KNV +EFYAPWCGHCK+LAPI D++  +Y++  ++VIAK D+TAN++  +  +V  +PT+ FF +++ +TV  Y G+RT +    F+E+     A
Sbjct:  334 LTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEDVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEV--EAVKVHSFPTLKFFPASADRTVIDYNGERTLDGFKKFLESGGQDGA 478          
BLAST of CX043789 vs. ExPASy Swiss-Prot
Match: PDIA1_RAT (Protein disulfide-isomerase OS=Rattus norvegicus GN=P4hb PE=1 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 3.120e-19
Identity = 51/147 (34.69%), Postives = 86/147 (58.50%), Query Frame = -2
Query:  401 LDADQIAPWVKEYKEGKVPPFRKSXXXXXXXXXXXXXXVAD-SLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTV-PYEGDRTKEDIVDFIENNRDKAA 832
            L A++I  +   + EGK+ P   S              +   + +++ F+  KNV +EFYAPWCGHCK+LAPI D++  +Y++  ++VIAK D+TAN++  +  +V  +PT+ FF +++ +TV  Y G+RT +    F+E+     A
Sbjct:  336 LTAEKITQFCHHFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEEVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEV--EAVKVHSFPTLKFFPASADRTVIDYNGERTLDGFKKFLESGGQDGA 480          
BLAST of CX043789 vs. ExPASy Swiss-Prot
Match: PDIA1_MACFU (Protein disulfide-isomerase OS=Macaca fuscata fuscata GN=P4HB PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.120e-19
Identity = 51/147 (34.69%), Postives = 85/147 (57.82%), Query Frame = -2
Query:  401 LDADQIAPWVKEYKEGKVPPFRKSXXXXXXXXXXXXXXVAD-SLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTV-PYEGDRTKEDIVDFIENNRDKAA 832
            L A++I  +   + EGK+ P   S              +   + +++ F+  KNV +EFYAPWCGHCK+LAPI D++  +Y++  ++VIAK D+TAN++  +  +V  +PT+ FF ++  +TV  Y G+RT +    F+E+     A
Sbjct:  336 LTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEEVAFDENKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEV--EAIKVHSFPTLKFFPASVDRTVIDYNGERTLDGFKKFLESGGQDGA 480          
BLAST of CX043789 vs. ExPASy Swiss-Prot
Match: PDIA1_BOVIN (Protein disulfide-isomerase OS=Bos taurus GN=P4HB PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.120e-19
Identity = 51/147 (34.69%), Postives = 86/147 (58.50%), Query Frame = -2
Query:  401 LDADQIAPWVKEYKEGKVPPFRKSXXXXXXXXXXXXXXVAD-SLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTV-PYEGDRTKEDIVDFIENNRDKAA 832
            L A++I  +   + EGK+ P   S              +   + +++ F+  KNV +EFYAPWCGHCK+LAPI D++  +Y++  ++VIAK D+TAN++  +  +V  +PT+ FF +++ +TV  Y G+RT +    F+E+     A
Sbjct:  336 LTAEKITEFCHRFLEGKIKPHLMSQELPDDWDKQPVKVLVGKNFEEVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEV--EAVKVHSFPTLKFFPASADRTVIDYNGERTLDGFKKFLESGGQDGA 480          
BLAST of CX043789 vs. ExPASy Swiss-Prot
Match: PDIA1_MOUSE (Protein disulfide-isomerase OS=Mus musculus GN=P4hb PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 4.075e-19
Identity = 50/147 (34.01%), Postives = 86/147 (58.50%), Query Frame = -2
Query:  401 LDADQIAPWVKEYKEGKVPPFRKSXXXXXXXXXXXXXXVADS-LQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTV-PYEGDRTKEDIVDFIENNRDKAA 832
            L A++I  +   + EGK+ P   S              +  +  +++ F+  KNV +EFYAPWCGHCK+LAPI D++  +Y++  +++IAK D+TAN++  +  +V  +PT+ FF +++ +TV  Y G+RT +    F+E+     A
Sbjct:  336 LTAEKITEFCHRFLEGKIKPHLMSQEVPEDWDKQPVKVLVGANFEEVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIIIAKMDSTANEV--EAVKVHSFPTLKFFPASADRTVIDYNGERTLDGFKKFLESGGQDGA 480          
BLAST of CX043789 vs. ExPASy Swiss-Prot
Match: GSBP_CHICK (Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Gallus gallus PE=2 SV=2)

HSP 1 Score: 95.5153 bits (236), Expect = 4.075e-19
Identity = 53/168 (31.55%), Postives = 92/168 (54.76%), Query Frame = -2
Query:  362 LDADQIAPWVKEYKEGKVPPFRKSXXXXXXXXXXXXXXV--ADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGK--TVPYEGDRTKEDIVDFIEN-------NRDKAAPKETVKEESGKDE 832
            L A+++  +   + EGK+ P   S              V    + +++ F+  KNV +EFYAPWCGHCK+LAP+ D +  +Y++D ++VIAK ++TAN++  +  +V  +PT+ F  AS +   + Y G+RT +    F+E+       N D    +E ++ +  +DE
Sbjct:  334 LTAEKLTQFCHHFLEGKIKPHLMSNEPLPEDWDKQPVKVLVGKNYEEVAFDEKKNVFIEFYAPWCGHCKQLAPMWDRLGEAYKDDENIVIAKMESTANEV--EAIKVHSFPTLKFFPASAERTVIDYNGERTLDGYKKFLESGGQDGYGNNDDDDLEEALESDMEEDE 499          
BLAST of CX043789 vs. ExPASy Swiss-Prot
Match: PDIA1_CRIGR (Protein disulfide-isomerase OS=Cricetulus griseus GN=P4HB PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 5.323e-19
Identity = 50/147 (34.01%), Postives = 85/147 (57.82%), Query Frame = -2
Query:  401 LDADQIAPWVKEYKEGKVPPFRKSXXXXXXXXXXXXXXVAD-SLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTV-PYEGDRTKEDIVDFIENNRDKAA 832
            L A++I  +   + EGK+ P   S              +   + +++ F+  KNV +EFYAPWCGHCK+LAPI D++  +Y++  +++IAK D+TAN++  +  +V  +PT+ FF + + +TV  Y G+RT +    F+E+     A
Sbjct:  336 LTAEKITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEEVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIIIAKMDSTANEV--EAVKVHSFPTLKFFPATADRTVIDYNGERTLDGFKKFLESGGQDGA 480          
BLAST of CX043789 vs. ExPASy Swiss-Prot
Match: ERP60_SCHMA (Probable protein disulfide-isomerase ER-60 OS=Schistosoma mansoni PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.186e-18
Identity = 48/145 (33.10%), Postives = 81/145 (55.86%), Query Frame = -2
Query:  425 QKYLKPNLDADQIAPWVKEYKEGKVPPFRKSXXXXXXXXXXXXXXVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVP--YEGDRTKEDIVDFI 853
            +KY       D  + ++ ++++G + P  KS              VA +  ++V N  K+V++ F+A WCGHCK L P  +E A   +N+ ++V+A  DATAND+P   ++V+G+PT++F     K+ P  YEG R   DI+ ++
Sbjct:  319 KKYKLEKFSLDAFSDFLNKFEDGLLTPHVKSEPLPTDDSSAVKKLVALNFDEIVNNEEKDVMVVFHAGWCGHCKNLMPKYEEAASKVKNEPNLVLAAMDATANDVP-SPYQVRGFPTIYFVPKGKKSSPVSYEGGRDTNDIIKYL 462          
BLAST of CX043789 vs. ExPASy Swiss-Prot
Match: PDI_YEAST (Protein disulfide-isomerase OS=Saccharomyces cerevisiae GN=PDI1 PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 7.686e-18
Identity = 52/142 (36.62%), Postives = 79/142 (55.63%), Query Frame = -2
Query:  416 LDADQIAPWVKEYKEGKVPPFRKSXXXXXXXXXXXXXXVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQN-DADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGK--TVPYEGDRTKEDIVDFIENN 832
            L++  I   VK++ +G   P  KS              V  +  ++V +  K+VL+ +YAPWCGHCK+LAP   E+A +Y N  +DV+IAK D T ND+ G    ++GYPT+       K  +V Y+G R+ + + DFI+ N
Sbjct:  344 LESKAIESLVKDFLKGDASPIVKSQEIFENQDSSVFQLVGKNHDEIVNDPKKDVLVLYYAPWCGHCKRLAPTYQELADTYANATSDVLIAKLDHTENDVRG--VVIEGYPTIVLYPGGKKSESVVYQGSRSLDSLFDFIKEN 483          
BLAST of CX043789 vs. ExPASy Swiss-Prot
Match: PDI1_CAEEL (Protein disulfide-isomerase 1 OS=Caenorhabditis elegans GN=pdi-1 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.712e-17
Identity = 42/114 (36.84%), Postives = 68/114 (59.65%), Query Frame = -2
Query:  377 ADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTVPYEGDRTKEDIVDFIENNRDKAAPKETVKEE 715
            A +  ++  +  K V ++FYAPWCGHCK+L P+ DE+A  Y+++ +VVIAK DAT N++     +V  +PT+  + + S   V Y+GDR  E   +F+      A+  ET  ++
Sbjct:  370 ASNFNEIALDETKTVFVKFYAPWCGHCKQLVPVWDELAEKYESNPNVVIAKLDATLNELA--DVKVNSFPTLKLWPAGSSTPVDYDGDRNLEKFEEFVNKYAGSASESETASQD 481          

HSP 2 Score: 83.1889 bits (204), Expect = 2.093e-15
Identity = 45/104 (43.27%), Postives = 60/104 (57.69%), Query Frame = -2
Query:  380 NSGKNVLLEFYAPWCGHCKKLAPILDEVA-VSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENNRDKAAPKETVKE 688
            N  + VL++FYAPWC HCK LAP  DE A +  +  +D+ +AK DAT N      FEV+GYPT+ +   SGK   Y G R    IVD++   + K+ P  T  E
Sbjct:   38 NGNEFVLVKFYAPWCVHCKSLAPKYDEAADLLKEEGSDIKLAKVDATENQALASKFEVRGYPTILY-FKSGKPTKYTGGRATAQIVDWV---KKKSGPTVTTVE 137          
The following BLAST results are available for this feature:
BLAST of CX043789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
PDIA1_HUMAN1.072e-1935.37Protein disulfide-isomerase OS=Homo sapiens GN=P4H... [more]
PDIA1_RAT3.120e-1934.69Protein disulfide-isomerase OS=Rattus norvegicus G... [more]
PDIA1_MACFU3.120e-1934.69Protein disulfide-isomerase OS=Macaca fuscata fusc... [more]
PDIA1_BOVIN3.120e-1934.69Protein disulfide-isomerase OS=Bos taurus GN=P4HB ... [more]
PDIA1_MOUSE4.075e-1934.01Protein disulfide-isomerase OS=Mus musculus GN=P4h... [more]
GSBP_CHICK4.075e-1931.55Dolichyl-diphosphooligosaccharide--protein glycotr... [more]
PDIA1_CRIGR5.323e-1934.01Protein disulfide-isomerase OS=Cricetulus griseus ... [more]
ERP60_SCHMA1.186e-1833.10Probable protein disulfide-isomerase ER-60 OS=Schi... [more]
PDI_YEAST7.686e-1836.62Protein disulfide-isomerase OS=Saccharomyces cerev... [more]
PDI1_CAEEL1.712e-1736.84Protein disulfide-isomerase 1 OS=Caenorhabditis el... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_13D09_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-13D09-H17-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043789 ID=CX043789; Name=CX043789; organism=Citrus sinensis; type=EST; length=863bp
TTTTTTTTTTTTTTTTTAAAATCCGAAATAATTAAGGCATTAAATTAAAA
TTATCCATTACGGATTTAACACGCAGTAAGTTACTCCTAGGCCGAAAATA
CTAATATCACAACTATGCGAATACCAAAAAGTACTGCAGCTACAAATGCC
AAAAATGCCTCCCCATTTTATTCACGGGAACAGAACAGATCTGTAAAGGG
AAATGGCCTCAGAAAAAGCTATAAGGGGGGATATAGGACAAGGGGGAGGA
GAACATCAGGCATTGTTTTGTCGACACTGATAGTTTTGGTATAACATCCG
CCAAACACGCGCCAACCGACTATGTGCACGGCTCTCTAAACATACCCATT
CCTTCTTAGAGCTCATCTTTTCCAGATTCCTCTTTTACAGTTTCCTTGGG
GGCAGCTTTGTCCCTGTTATTTTCAATGAAGTCAACAATATCTTCTTTGG
TCCTATCCCCCTCATAGGGCACTGTCTTTCCACTAGCAGATCGGAAGAAC
ACGGTTGGGTAACCTTGGACTTCAAAGGTGTCACCAGGAATATCATTTGC
GGTTGCATCAAATTTTGCAATAACAACATCAGCATCATTTTGATATGAGA
CAGCAACTTCATCCAAGATTGGAGCCAACTTTTTGCAGTGTCCACACCAA
GGAGCGTAAAACTCGAGCAAAACATTTTTTCCAGAGTTGAAAACCATGTC
CTGAAGGCTGTCAGCAACAACCACTTTCACAGGCTCGTTGTTCTCTTCAG
GGATAGGCTCAGACTTTCTGAATGGGGGAACCTTGCCTTCCTTGTATTCC
TTCACCCAAGGTGCAATCTGATCGGCATCCAAGTTCGGCTTCAAATACTT
CTGCCCATCATTA
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