CX043770
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043770 vs. ExPASy Swiss-Prot
Match: RS2_BOVIN (40S ribosomal protein S2 OS=Bos taurus GN=RPS2 PE=2 SV=2) HSP 1 Score: 349.747 bits (896), Expect = 1.326e-95 Identity = 165/218 (75.69%), Postives = 193/218 (88.53%), Query Frame = -3 Query: 265 EEEKWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECLLKTYGFLTPDFWRETRFVKSPYQEYTDLL 918 E+++W+PVTKLGRLV++ KI+SLE+IYL SLPIKE +IID +G LKDEV+KIMPVQKQTRAGQRTRFKAFV +GD +GHVGLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNKIG+PHTVPCKVTG+CGSV VR++PAPRG GIV+A VPKK+L AGIDD +TS+RG T TLGNF KATF+ + KTY +LTPD W+ET F KSPYQE+TD L Sbjct: 56 EDKEWLPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEFTDHL 273
BLAST of CX043770 vs. ExPASy Swiss-Prot
Match: RS2_DICDI (40S ribosomal protein S2 OS=Dictyostelium discoideum GN=rps2 PE=1 SV=1) HSP 1 Score: 334.339 bits (856), Expect = 5.767e-91 Identity = 161/221 (72.85%), Postives = 188/221 (85.07%), Query Frame = -3 Query: 256 EEEKWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECLLKTYGFLTPDFWRETRFVKSPYQEYTDLLTPK 918 E + W PVTKLGRLV G + ++ +IYL SLPIKEYQIID + LKDEVMKI+PVQKQTRAGQRTRFKAFVVVGD +GHVGLGVKC+KEVATAI GAI+ AKLSVIPVRRGYWGNK+G PHTVP KVTGKCGSV VR+VPAPRG GIVAARVPKK+LQ+AG+DDV+TSSRG T+T+GNFV ATF + KT+ +LTPD WRE + +K+PYQE++ L+ K Sbjct: 45 ETKSWTPVTKLGRLVALGLVENIHEIYLFSLPIKEYQIIDKFLN--LKDEVMKIVPVQKQTRAGQRTRFKAFVVVGDHNGHVGLGVKCAKEVATAISGAIVAAKLSVIPVRRGYWGNKLGAPHTVPTKVTGKCGSVAVRLVPAPRGTGIVAARVPKKLLQYAGVDDVYTSSRGKTRTMGNFVMATFFAITKTFAYLTPDLWREVKLIKTPYQEHSAKLSEK 263
BLAST of CX043770 vs. ExPASy Swiss-Prot
Match: RS2_SCHPO (40S ribosomal protein S2 OS=Schizosaccharomyces pombe GN=rps2 PE=2 SV=1) HSP 1 Score: 327.405 bits (838), Expect = 7.050e-89 Identity = 155/219 (70.78%), Postives = 188/219 (85.84%), Query Frame = -3 Query: 265 EEEEKWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECLLKTYGFLTPDFWRETRFVKSPYQEYTDLL 921 +EE++WVPVTKLGRLV+ GKI+S+E+IYL+SLPIKEYQI+D + +L DEVMK++PVQKQTRAGQRTRFKAFVV+GD+DGHVGLG+KC+KEVATAIRGAII+ KLS++P+RRGYWG +G PHTVP KV+GKCGSVTVR+VPAPRGAG+VAA V K+ LQ AGI+D +T SRGSTKTLGNFVKA F TYG LTP+ W E F ++P +EY D+L Sbjct: 29 DEEKEWVPVTKLGRLVKAGKIKSIEEIYLYSLPIKEYQIVDYFLP-RLNDEVMKVVPVQKQTRAGQRTRFKAFVVIGDSDGHVGLGIKCAKEVATAIRGAIIMGKLSIMPIRRGYWGTALGDPHTVPVKVSGKCGSVTVRLVPAPRGAGLVAAPVTKRFLQLAGIEDCYTQSRGSTKTLGNFVKAAFAAASLTYGILTPNLWAERPFGQTPIEEYADIL 246
BLAST of CX043770 vs. ExPASy Swiss-Prot
Match: RS2_CRIGR (40S ribosomal protein S2 (Fragment) OS=Cricetulus griseus GN=RPS2 PE=2 SV=1) HSP 1 Score: 324.324 bits (830), Expect = 5.968e-88 Identity = 154/201 (76.62%), Postives = 178/201 (88.56%), Query Frame = -3 Query: 301 VPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECLLKTYGFLTPDFWRETRF 903 +PVTKLGRLV++ KI+SLE+IYL SLPIKE +IID +G LKDEV+KIMPVQKQTRAGQRTRFKAFV +GD +GHVGLGVKCSKEVATAIRGAIILAKLS++PVRRGYWGNKIG+PHTVPCKVTG+CGSV VR++PAPRG GIV+A VPKK+L AGIDD +TS+RG T TLGNF KATF+ + KTY +LTPD W+ET F Sbjct: 1 IPVTKLGRLVKDMKIKSLEEIYLFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVF 201
BLAST of CX043770 vs. ExPASy Swiss-Prot
Match: RS2_CAEEL (40S ribosomal protein S2 OS=Caenorhabditis elegans GN=rps-2 PE=1 SV=1) HSP 1 Score: 320.857 bits (821), Expect = 6.599e-87 Identity = 154/219 (70.32%), Postives = 183/219 (83.56%), Query Frame = -3 Query: 265 EEEEKWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECLLKTYGFLTPDFWRETRFVKSPYQEYTDLL 921 E+E +W PVTKLGRLV+E KI +LE+IYL+SLPIKE++IID L + LKDEV+KI PVQKQT AGQRTRFKAFV +GD GHVGLGVKCSKEVATAIRGAI+ AKL+V+PVRRGYWGNKIG PHTVPCKVTGKC SV VR++PAPRG GIV+A VPKK+L AGI+D +T+++GST TLGNF KAT+ L +TY +LTPD W+E KSPYQ + + L Sbjct: 52 EKETEWTPVTKLGRLVKEKKITTLEEIYLNSLPIKEFEIIDALCSN-LKDEVLKISPVQKQTTAGQRTRFKAFVAIGDHAGHVGLGVKCSKEVATAIRGAIVAAKLAVVPVRRGYWGNKIGLPHTVPCKVTGKCASVMVRLIPAPRGTGIVSAPVPKKLLHMAGIEDCYTAAKGSTATLGNFAKATYAALQRTYSYLTPDLWKEEALEKSPYQRHHEYL 269
BLAST of CX043770 vs. ExPASy Swiss-Prot
Match: RS2_LEIAM (40S ribosomal protein S2 OS=Leishmania amazonensis PE=3 SV=1) HSP 1 Score: 305.834 bits (782), Expect = 2.197e-82 Identity = 146/219 (66.67%), Postives = 178/219 (81.28%), Query Frame = -3 Query: 265 EEEKWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGH-KLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECLLKTYGFLTPDFWRETRFVKSPYQEYTDLL 918 EE++WVP TKLGRLV+ K+ SLE+I+L S+PIKE+QI+DTLI KL DE+MKI PVQK T AGQRTRFKAF VVGD DGH+G+G + KEV+ AIR ++I AKL+++PVRRGYWGNKIG PHT+P KVTGKCGSV VR+VPAPRG GIVAA VPKK+L+FAG++DV+TSSRG T+T GN + ATF L KTYGFLTPD W +T + P E+ +LL Sbjct: 41 EEKEWVPCTKLGRLVKAQKVTSLEEIFLFSMPIKEHQIVDTLIAEGKLHDEMMKIYPVQKATSAGQRTRFKAFNVVGDCDGHIGIGARVGKEVSLAIRASMIAAKLNIVPVRRGYWGNKIGEPHTIPMKVTGKCGSVAVRLVPAPRGTGIVAAPVPKKILEFAGVEDVYTSSRGKTRTHGNLIMATFYALRKTYGFLTPDLWADTEPSRDPTDEHGELL 259
BLAST of CX043770 vs. ExPASy Swiss-Prot
Match: RS2_YEAST (40S ribosomal protein S2 OS=Saccharomyces cerevisiae GN=RPS2 PE=1 SV=3) HSP 1 Score: 290.426 bits (742), Expect = 9.550e-78 Identity = 141/216 (65.28%), Postives = 174/216 (80.56%), Query Frame = -3 Query: 271 EEEKWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECLLKTYGFLTPDFWRETRFVKSPYQEYTD 918 EE+ WVPVTKLGRLV+ GKI ++E+I+LHSLP+KE+QIIDTL+ L+DEVM I PVQKQTRAGQRTRFKA VVVGD++GHVGLG+K +KEVA AIR II+AKLSVIP+RRGYWG +G+PH++ K TGKCGSVTVR++PAPRG+GIVA+ KK+LQ AG++DV+T S G T+TL N +KA F + TYGFLTP+ W E SP Y+D Sbjct: 31 EEKGWVPVTKLGRLVKAGKITTIEEIFLHSLPVKEFQIIDTLLPG-LQDEVMNIKPVQKQTRAGQRTRFKAVVVVGDSNGHVGLGIKTAKEVAGAIRAGIIIAKLSVIPIRRGYWGTNLGQPHSLATKTTGKCGSVTVRLIPAPRGSGIVASPAVKKLLQLAGVEDVYTQSNGKTRTLENTLKAAFVAIGNTYGFLTPNLWAEQPLPVSPLDIYSD 245
BLAST of CX043770 vs. ExPASy Swiss-Prot
Match: RS5_HYPBU (30S ribosomal protein S5P OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=rps5p PE=3 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 3.914e-47 Identity = 102/207 (49.28%), Postives = 139/207 (67.15%), Query Frame = -3 Query: 307 EEEEKWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR--GYWGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECLLKTYGFLTPDFWRET 921 E E++W P T +GRLV+EG+IRSL +I+ +LPI E +I+D LIG +LK E + + VQK T AG+ RF+ VV+G+ +G VG+G ++++A AI AI AKL++IPVRR G W PH+VP V GK GSV V + PAPRG G+VA K VL+ AGI DV++ ++G T+T NFVKAT+ L +TY F+TP W T Sbjct: 7 ELEQEWQPRTYVGRLVKEGRIRSLSEIFEKNLPILEPEIVDYLIGPELKSETVDVRLVQKMTDAGRINRFRVVVVIGNENGFVGVGQGKARQLAVAIEKAIRNAKLNIIPVRRGCGSWECLCSEPHSVPFTVRGKSGSVEVILKPAPRGTGLVAGDAAKVVLRLAGIRDVWSFTKGDTRTTINFVKATYNALKQTYKFVTPLDWART 213
BLAST of CX043770 vs. ExPASy Swiss-Prot
Match: RS5_THEPD (30S ribosomal protein S5P OS=Thermofilum pendens (strain Hrk 5) GN=rps5p PE=3 SV=1) HSP 1 Score: 187.578 bits (475), Expect = 8.719e-47 Identity = 94/200 (47.00%), Postives = 139/200 (69.50%), Query Frame = -3 Query: 316 KWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECLLKTYGFLTPDFW 909 +W P T LGRLV EGKI+S+++++ ++PI+E +IIDTL+ LK EV+ + VQ+QT +G+ ++++ V VG+ DG+VG+G+ S+++ AI A AKL+++PVRRG W G PH++P KV GK GSV + ++PAP+G G+VA+ V K VL+ AGI DV++ S G T+T N KA +E L KTY F +PD W Sbjct: 4 EWQPRTLLGRLVVEGKIKSIDEVFARNMPIREVEIIDTLLPG-LKSEVLSVGFVQRQTDSGEVSQYQVTVAVGNEDGYVGVGMGKSRQIGIAIEKATRRAKLNIVPVRRGCGSWECLCGEPHSIPFKVEGKAGSVKIELIPAPKGVGLVASDVAKTVLRLAGIKDVWSRSYGETRTTHNMAKAVYEALKKTYQFYSPDQW 202
BLAST of CX043770 vs. ExPASy Swiss-Prot
Match: RS5_IGNH4 (30S ribosomal protein S5P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rps5p PE=3 SV=1) HSP 1 Score: 185.267 bits (469), Expect = 4.327e-46 Identity = 100/201 (49.75%), Postives = 136/201 (67.66%), Query Frame = -3 Query: 316 EKWVPVTKLGRLVREGKIRSLEQIYLHSLPIKEYQIIDTLIGHKLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDTDGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGY--WGNKIGRPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFECLLKTYGFLTPDFW 912 E+WVP T++GR+V+EGKI S+ +++ +LPI E +I+D L+ LK EV+ + VQK T AG+ TR + VV+G+ DG VGLG+ +K++ AI+ A+ AKL++ PVRRG W G PH+VP V GK GSV V + PAPRG G+VA V K VL++AGI DV+T + G T+T NF KATF L +TY FL P W Sbjct: 8 EEWVPRTRVGRMVKEGKITSIYELFEKNLPILEPEIVDYLVPD-LKHEVLDVSLVQKVTDAGRVTRLRVLVVIGNEDGLVGLGMGKAKQMRFAIQKALANAKLNITPVRRGCGSWECTCGEPHSVPFTVRGKSGSVEVILKPAPRGTGLVAGDVAKAVLRYAGIKDVWTHTEGETRTTHNFAKATFNALKQTYKFLAPWDW 207 The following BLAST results are available for this feature:
BLAST of CX043770 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 478
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043770 ID=CX043770; Name=CX043770; organism=Citrus sinensis; type=EST; length=923bpback to top |