CX043760

Overview
NameCX043760
Unique NameCX043760
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length849
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043760 vs. ExPASy Swiss-Prot
Match: METK2_CATRO (S-adenosylmethionine synthetase 2 OS=Catharanthus roseus GN=SAMS2 PE=1 SV=1)

HSP 1 Score: 329.331 bits (843), Expect = 1.638e-89
Identity = 162/185 (87.57%), Postives = 170/185 (91.89%), Query Frame = -1
Query:  295 DLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 849
            DLKEHVIKPV+PEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEILKIVKE+FDFRPGM+ INLDLKRGGN RFLKTAAYGHFGR+DPDFTWEVVKPLK+EK +A
Sbjct:  209 DLKEHVIKPVVPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILKIVKENFDFRPGMIAINLDLKRGGNSRFLKTAAYGHFGREDPDFTWEVVKPLKFEKVEA 393          
BLAST of CX043760 vs. ExPASy Swiss-Prot
Match: METK2_BRAJU (S-adenosylmethionine synthetase 2 OS=Brassica juncea GN=MSAMS2 PE=2 SV=1)

HSP 1 Score: 329.331 bits (843), Expect = 1.638e-89
Identity = 165/185 (89.19%), Postives = 169/185 (91.35%), Query Frame = -1
Query:  295 DLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 849
            DLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEIL+IVKESFDFRPGM++INLDLKRGGNGRFLKTAAYGHFGRDD DFTWEVVKPLK  K QA
Sbjct:  209 DLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILEIVKESFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDADFTWEVVKPLKSNKVQA 393          
BLAST of CX043760 vs. ExPASy Swiss-Prot
Match: METK4_VITVI (S-adenosylmethionine synthetase 4 OS=Vitis vinifera GN=METK4 PE=3 SV=1)

HSP 1 Score: 328.561 bits (841), Expect = 2.793e-89
Identity = 162/184 (88.04%), Postives = 168/184 (91.30%), Query Frame = -1
Query:  298 DLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQ 849
            DLKEHVIKP++PEK+LDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVD+Y TGKIPDKEILKIVKESFDFRPGM+ INLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLK EK Q
Sbjct:  209 DLKEHVIKPIVPEKFLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYATGKIPDKEILKIVKESFDFRPGMIAINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKAEKAQ 392          
BLAST of CX043760 vs. ExPASy Swiss-Prot
Match: METK3_PETHY (S-adenosylmethionine synthetase 3 OS=Petunia hybrida GN=SAM3 PE=2 SV=1)

HSP 1 Score: 328.561 bits (841), Expect = 2.793e-89
Identity = 163/184 (88.59%), Postives = 167/184 (90.76%), Query Frame = -1
Query:  298 DLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQ 849
            DLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAYIVRQAAKS+VANGLARRCIVQVSYAIGVPEPLSVFVD+YGTG IPDKEILKIVKE+FDFRPGM+ INLDLKRGGNGRFLKTAAYGHFGRDD DFTWEVVKPLK EK Q
Sbjct:  209 DLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSVVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGMIPDKEILKIVKENFDFRPGMIAINLDLKRGGNGRFLKTAAYGHFGRDDTDFTWEVVKPLKCEKAQ 392          
BLAST of CX043760 vs. ExPASy Swiss-Prot
Match: METK2_PICSI (S-adenosylmethionine synthetase 2 OS=Picea sitchensis GN=METK2 PE=2 SV=1)

HSP 1 Score: 328.561 bits (841), Expect = 2.793e-89
Identity = 160/185 (86.49%), Postives = 167/185 (90.27%), Query Frame = -1
Query:  295 DLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 849
            DLKEHVIKPVIPEKYLDE TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAYIVRQAAKSIVA GLARRC+VQVSYAIGVPEPLSVFVDSYGTG IPDKEIL+++KE+FDFRPGM+TINLDLKRGGNGRF KTAAYGHFGRDDPDFTWE VKPLKW+K QA
Sbjct:  209 DLKEHVIKPVIPEKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVAAGLARRCLVQVSYAIGVPEPLSVFVDSYGTGSIPDKEILELIKENFDFRPGMITINLDLKRGGNGRFQKTAAYGHFGRDDPDFTWETVKPLKWDKAQA 393          
BLAST of CX043760 vs. ExPASy Swiss-Prot
Match: METK3_ORYSJ (S-adenosylmethionine synthetase 3 OS=Oryza sativa subsp. japonica GN=METK3 PE=2 SV=1)

HSP 1 Score: 327.405 bits (838), Expect = 6.223e-89
Identity = 159/185 (85.95%), Postives = 168/185 (90.81%), Query Frame = -1
Query:  295 DLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 849
            DLKEHVIKPVIPE+YLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAYI RQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPD+EIL+IV E+FDFRPGM+ INLDL RGGNGR+LKTAAYGHFGR+DPDFTWEVVKPLKWE+P A
Sbjct:  212 DLKEHVIKPVIPEQYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIARQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDREILRIVTENFDFRPGMIIINLDLMRGGNGRYLKTAAYGHFGREDPDFTWEVVKPLKWEEPSA 396          
BLAST of CX043760 vs. ExPASy Swiss-Prot
Match: METK_PINBN (S-adenosylmethionine synthetase OS=Pinus banksiana GN=METK PE=2 SV=1)

HSP 1 Score: 326.635 bits (836), Expect = 1.061e-88
Identity = 160/185 (86.49%), Postives = 166/185 (89.73%), Query Frame = -1
Query:  295 DLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 849
            DLKEHVIKPVIPEKYLDE TIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLS+FVD+YGTG IPDKEIL+I+KE FDFRPGM++INLDLKRGGNGR  KTAAYGHFGRDDPDFTWE VKPLKWEK QA
Sbjct:  209 DLKEHVIKPVIPEKYLDENTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSLFVDTYGTGSIPDKEILEIIKEHFDFRPGMISINLDLKRGGNGRSQKTAAYGHFGRDDPDFTWETVKPLKWEKAQA 393          
BLAST of CX043760 vs. ExPASy Swiss-Prot
Match: METK2_SUASA (S-adenosylmethionine synthetase 2 OS=Suaeda salsa GN=METK2 PE=2 SV=1)

HSP 1 Score: 326.635 bits (836), Expect = 1.061e-88
Identity = 161/185 (87.03%), Postives = 167/185 (90.27%), Query Frame = -1
Query:  295 DLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 849
            DLKEHVIKPVIPEKYLD+KTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAYIVRQAAKSIVANGLARR IVQVSYAIGVPEPLSVFVD+YGTGKIPDK+ILKIVKE+FDFRPGM++INLDLKRGGN RF KTAAYGHFGRDDPDFTWE VKPLKWEK  A
Sbjct:  209 DLKEHVIKPVIPEKYLDDKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVANGLARRAIVQVSYAIGVPEPLSVFVDTYGTGKIPDKDILKIVKENFDFRPGMISINLDLKRGGNARFQKTAAYGHFGRDDPDFTWETVKPLKWEKVPA 393          
BLAST of CX043760 vs. ExPASy Swiss-Prot
Match: METK_POPDE (S-adenosylmethionine synthetase OS=Populus deltoides GN=METK PE=2 SV=1)

HSP 1 Score: 325.865 bits (834), Expect = 1.811e-88
Identity = 159/181 (87.85%), Postives = 167/181 (92.27%), Query Frame = -1
Query:  307 DLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWE 849
            DLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHG++GLTGRKIIIDTY            GKDPTKVDRSGAYIVRQAAKSIVA+GLARRCIVQVSYAIGVPEPLSVFVD+YGTGKIPDKEIL+IVKE FDFRPGM++INLDLKRGGN RFLKTAAYGHFGRDDPDFTWEVVKPLKW+
Sbjct:  210 DLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGESGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGKIPDKEILQIVKERFDFRPGMISINLDLKRGGNSRFLKTAAYGHFGRDDPDFTWEVVKPLKWD 390          
BLAST of CX043760 vs. ExPASy Swiss-Prot
Match: METK4_ARATH (S-adenosylmethionine synthetase 4 OS=Arabidopsis thaliana GN=METK4 PE=1 SV=1)

HSP 1 Score: 325.479 bits (833), Expect = 2.365e-88
Identity = 164/185 (88.65%), Postives = 168/185 (90.81%), Query Frame = -1
Query:  295 DLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVVKPLKWEKPQA 849
            DLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTY            GKDPTKVDRSGAYIVRQAAKSIVA+GLARR IVQVSYAIGVPEPLSVFVDSYGTGKIPDKEIL+IVKESFDFRPGM++INLDLKRGGNGRFLKTAAYGHFGRDD DFTWEVVKPLK  K QA
Sbjct:  209 DLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYIVRQAAKSIVASGLARRVIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILEIVKESFDFRPGMISINLDLKRGGNGRFLKTAAYGHFGRDDADFTWEVVKPLKSNKVQA 393          
The following BLAST results are available for this feature:
BLAST of CX043760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK2_CATRO1.638e-8987.57S-adenosylmethionine synthetase 2 OS=Catharanthus ... [more]
METK2_BRAJU1.638e-8989.19S-adenosylmethionine synthetase 2 OS=Brassica junc... [more]
METK4_VITVI2.793e-8988.04S-adenosylmethionine synthetase 4 OS=Vitis vinifer... [more]
METK3_PETHY2.793e-8988.59S-adenosylmethionine synthetase 3 OS=Petunia hybri... [more]
METK2_PICSI2.793e-8986.49S-adenosylmethionine synthetase 2 OS=Picea sitchen... [more]
METK3_ORYSJ6.223e-8985.95S-adenosylmethionine synthetase 3 OS=Oryza sativa ... [more]
METK_PINBN1.061e-8886.49S-adenosylmethionine synthetase OS=Pinus banksiana... [more]
METK2_SUASA1.061e-8887.03S-adenosylmethionine synthetase 2 OS=Suaeda salsa ... [more]
METK_POPDE1.811e-8887.85S-adenosylmethionine synthetase OS=Populus deltoid... [more]
METK4_ARATH2.365e-8888.65S-adenosylmethionine synthetase 4 OS=Arabidopsis t... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS07_13C05_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-13C05-F9-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043760 ID=CX043760; Name=CX043760; organism=Citrus sinensis; type=EST; length=849bp
CTTTTTTTAAGCAAAAGGAAGAATTTTACTAATTCCAGGCACCAGTTGAG
CAAAATTCTCAATCGATATCACTACACAACAGTGGTGACATGGTACATTA
AACCAAAACCAAAAAAGAAGTGGGGAAAGAAGAAAAAGAAAGGAATTGAA
TGGGGAACATGTATGAGTTCTGAACACAGGAGATTTGCTTAGTATTACAA
AGCAGCAGCAAGATAATATTCAAATTATTCATCCACTACCAATAGAAGCA
AACTTGAACAGCAGGGATAGTTTTCACTTTTCAACTCAAATTTAAGCTTG
AGGCTTTTCCCACTTGAGGGGCTTCACAACTTCCCAAGTGAAGTCTGGGT
CATCCCTGCCAAAGTGTCCATAGGCAGCAGTCTTCAAGAACCTGCCATTA
CCGCCCCTTTTGAGATCCAAATTGATGGTCATCATTCCTGGCCTGAAATC
AAAGCTTTCCTTCACAATTTTGAGGATCTCCTTGTCAGGAATCTTGCCGG
TTCCATATGAGTCCACAAAAACAGACAATGGCTCAGGCACACCAATGGCA
TAGGAGACTTGGACAATGCACCTGCGAGCAAGCCCGTTTGCAACAATGCT
CTTAGCAGCCTGCCTAACAATGTATGCACCACTCCTATCCACCTTAGTAG
GGTCTTTTCCAGAGAAAGCACCGCCACCATGGGCTCCCCAGCCACCATAA
GTGTCGATGATGATCTTACGTCCAGTGAGACCAGCATCACCATGAGGCCC
ACCAATGACAAAACGACCTGATGGATTAAGGTGGAAGATGGTCTTCTCAT
CAAGGTACTTCTCGGGGATGACAGGCTTAATGACGTGCTCCTTAAGGTC
back to top