CX043760

Overview
NameCX043760
Unique NameCX043760
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length849
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043760 vs. ExPASy Swiss-Prot
Match: METK_STRP3 (S-adenosylmethionine synthetase OS=Streptococcus pyogenes serotype M3 GN=metK PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.370e-42
Identity = 91/173 (52.60%), Postives = 115/173 (66.47%), Query Frame = -1
Query:  331 DLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 849
            D+ E VIK VIP  YLD+ T F +NP+GRFVIGGP GD+GLTGRKII+DTY            GKD TKVDRS +Y  R  AK++VA GLA +  VQ++YAIGV +P+SV VD++GT  +P+  +   V++ FD RP  +   LDLKR     + +TAAYGH GR D D  WE
Sbjct:  213 DVIEKVIKAVIPADYLDDDTKFFINPTGRFVIGGPQGDSGLTGRKIIVDTYGGYSRHGGGAFSGKDATKVDRSASYAARYIAKNLVAAGLATKAEVQLAYAIGVAQPVSVRVDTFGTSTVPEAVLEAAVRQVFDLRPAGIIQMLDLKR---PIYKQTAAYGHMGRTDIDLPWE 382          
BLAST of CX043760 vs. ExPASy Swiss-Prot
Match: METK_SHEPW (S-adenosylmethionine synthetase OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=metK PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.370e-42
Identity = 89/170 (52.35%), Postives = 117/170 (68.82%), Query Frame = -1
Query:  331 EHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 840
            E +IKPV+P K+L + T + +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ ++++GT K+ ++ ++ +V+  FD RP  +T  L+L R     +  TAAYGHFGR+  +F WE
Sbjct:  206 ETIIKPVLPAKWLSKDTKYFINPTGRFVIGGPVGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSISIETFGTAKVAEELLIDLVRRHFDLRPYGLTEMLNLAR---PIYQATAAYGHFGRN--EFPWE 370          
BLAST of CX043760 vs. ExPASy Swiss-Prot
Match: METK_SHEHH (S-adenosylmethionine synthetase OS=Shewanella halifaxensis (strain HAW-EB4) GN=metK PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.370e-42
Identity = 89/170 (52.35%), Postives = 117/170 (68.82%), Query Frame = -1
Query:  331 EHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 840
            E +IKPV+P K+L + T + +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ ++++GT K+ ++ ++ +V+  FD RP  +T  L+L R     +  TAAYGHFGR+  +F WE
Sbjct:  206 ETIIKPVLPAKWLSKDTKYFINPTGRFVIGGPVGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSISIETFGTAKVGEELLIDLVRRHFDLRPYGLTEMLNLAR---PIYQATAAYGHFGRE--EFPWE 370          
BLAST of CX043760 vs. ExPASy Swiss-Prot
Match: METK_PSEPF (S-adenosylmethionine synthetase OS=Pseudomonas fluorescens (strain Pf0-1) GN=metK PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.370e-42
Identity = 91/180 (50.56%), Postives = 119/180 (66.11%), Query Frame = -1
Query:  331 EHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDD----------PDFTWE 840
            E ++K V+P + L + T FH+NP+G+F+IGGP GD GLTGRKII+D+Y            GKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV +P S+ ++++GTGKI D +I+K+V+E FD RP  +T  LDL    +  + +TAAYGHFGR              FTWE
Sbjct:  206 ELIVKHVLPAELLSKDTQFHINPTGQFIIGGPVGDCGLTGRKIIVDSYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAERCEIQVSYAIGVAQPTSISLNTFGTGKISDDKIIKLVREVFDLRPYAITTMLDLL---HPMYQETAAYGHFGRAPQTKTVGEDTFSTFTWE 382          
BLAST of CX043760 vs. ExPASy Swiss-Prot
Match: METK_PSEAE (S-adenosylmethionine synthetase OS=Pseudomonas aeruginosa GN=metK PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.370e-42
Identity = 91/181 (50.28%), Postives = 120/181 (66.30%), Query Frame = -1
Query:  304 EHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFT--WEVVKPLKWEK 840
            E +IK V+P + L + T FH+NP+G FVIGGP GD GLTGRKII+D+Y            GKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV +P S+ ++++GTGK+ D++I+++V+E FD RP  +T  LDL    +  +  TAAYGHFGR   + T   +      WEK
Sbjct:  206 ELIIKQVLPAELLHKDTQFHINPTGNFVIGGPVGDCGLTGRKIIVDSYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAERCEIQVSYAIGVAQPTSISINTFGTGKVSDEKIVQLVREHFDLRPYAITKMLDLL---HPMYQPTAAYGHFGRHPFELTVDGDTFTAFTWEK 383          
BLAST of CX043760 vs. ExPASy Swiss-Prot
Match: METK_PSEAB (S-adenosylmethionine synthetase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=metK PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.370e-42
Identity = 91/181 (50.28%), Postives = 120/181 (66.30%), Query Frame = -1
Query:  304 EHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFT--WEVVKPLKWEK 840
            E +IK V+P + L + T FH+NP+G FVIGGP GD GLTGRKII+D+Y            GKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV +P S+ ++++GTGK+ D++I+++V+E FD RP  +T  LDL    +  +  TAAYGHFGR   + T   +      WEK
Sbjct:  206 ELIIKQVLPAELLHKDTQFHINPTGNFVIGGPVGDCGLTGRKIIVDSYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAERCEIQVSYAIGVAQPTSISINTFGTGKVSDEKIVQLVREHFDLRPYAITKMLDLL---HPMYQPTAAYGHFGRHPFELTVDGDTFTAFTWEK 383          
BLAST of CX043760 vs. ExPASy Swiss-Prot
Match: METK_PSEA8 (S-adenosylmethionine synthetase OS=Pseudomonas aeruginosa (strain LESB58) GN=metK PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.370e-42
Identity = 91/181 (50.28%), Postives = 120/181 (66.30%), Query Frame = -1
Query:  304 EHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFT--WEVVKPLKWEK 840
            E +IK V+P + L + T FH+NP+G FVIGGP GD GLTGRKII+D+Y            GKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV +P S+ ++++GTGK+ D++I+++V+E FD RP  +T  LDL    +  +  TAAYGHFGR   + T   +      WEK
Sbjct:  206 ELIIKQVLPAELLHKDTQFHINPTGNFVIGGPVGDCGLTGRKIIVDSYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAERCEIQVSYAIGVAQPTSISINTFGTGKVSDEKIVQLVREHFDLRPYAITKMLDLL---HPMYQPTAAYGHFGRHPFELTVDGDTFTAFTWEK 383          
BLAST of CX043760 vs. ExPASy Swiss-Prot
Match: METK_PSEA7 (S-adenosylmethionine synthetase OS=Pseudomonas aeruginosa (strain PA7) GN=metK PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.370e-42
Identity = 91/181 (50.28%), Postives = 120/181 (66.30%), Query Frame = -1
Query:  304 EHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFT--WEVVKPLKWEK 840
            E +IK V+P + L + T FH+NP+G FVIGGP GD GLTGRKII+D+Y            GKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV +P S+ ++++GTGK+ D++I+++V+E FD RP  +T  LDL    +  +  TAAYGHFGR   + T   +      WEK
Sbjct:  206 ELIIKQVLPAELLHKDTQFHINPTGNFVIGGPVGDCGLTGRKIIVDSYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLAERCEIQVSYAIGVAQPTSISINTFGTGKVSDEKIVQLVREHFDLRPYAITKMLDLL---HPMYQPTAAYGHFGRHPFELTVDGDTFTAFTWEK 383          
BLAST of CX043760 vs. ExPASy Swiss-Prot
Match: METK_PROMA (S-adenosylmethionine synthetase OS=Prochlorococcus marinus GN=metK PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.370e-42
Identity = 94/183 (51.37%), Postives = 122/183 (66.67%), Query Frame = -1
Query:  322 DLKEHVIKPV---IPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGN---GRFLK-TAAYGHFGRDDPDFTWEVVK 849
            DL E V+KP    +P K + EKT F +NP+G+FV+GGP GDAGLTGRKII+DTY            GKDPTKVDRS AY  R  AKS+VA GLA R  VQ+SYAIGV  P+S+ V+++G+GK+ ++ + ++V E+FD RPG +     L+   N   GRF +  AAYGHFGR D +  WE V+
Sbjct:  217 DLWELVVKPATEDLPIKPIQEKTRFLVNPTGKFVVGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARFVAKSLVAAGLASRVEVQLSYAIGVANPVSILVEAFGSGKMSNEALTELVTENFDLRPGAIIEQFGLRSLPNQRQGRFYRDVAAYGHFGRPDLNLPWEDVQ 399          
BLAST of CX043760 vs. ExPASy Swiss-Prot
Match: METK_PROM1 (S-adenosylmethionine synthetase OS=Prochlorococcus marinus (strain NATL1A) GN=metK PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.370e-42
Identity = 96/184 (52.17%), Postives = 122/184 (66.30%), Query Frame = -1
Query:  325 DLKEHVIKPV---IPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLK-----RGGNGRFLK-TAAYGHFGRDDPDFTWEVV 849
            DL + V++P    +P K   E T F +NP+G+FVIGGP GDAGLTGRKII+DTY            GKDPTKVDRS AY  R  AK++VA  LA++  VQ+SYAIGV +P+S+ VDS+GTGK+ D E+ ++V++ FD RPG +    DL+     RG  GRF + TAAYGHFGR D    WE V
Sbjct:  217 DLWKFVVEPATEDLPLKPAKESTRFLVNPTGKFVIGGPQGDAGLTGRKIIVDTYGGYARHGGGAFSGKDPTKVDRSAAYAARFVAKALVAANLAKKVEVQLSYAIGVAKPISILVDSFGTGKVSDSELTQLVQDQFDLRPGAIIKAFDLQNLPSVRG--GRFYRDTAAYGHFGRTDILLPWEDV 398          
The following BLAST results are available for this feature:
BLAST of CX043760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_STRP34.370e-4252.60S-adenosylmethionine synthetase OS=Streptococcus p... [more]
METK_SHEPW4.370e-4252.35S-adenosylmethionine synthetase OS=Shewanella piez... [more]
METK_SHEHH4.370e-4252.35S-adenosylmethionine synthetase OS=Shewanella hali... [more]
METK_PSEPF4.370e-4250.56S-adenosylmethionine synthetase OS=Pseudomonas flu... [more]
METK_PSEAE4.370e-4250.28S-adenosylmethionine synthetase OS=Pseudomonas aer... [more]
METK_PSEAB4.370e-4250.28S-adenosylmethionine synthetase OS=Pseudomonas aer... [more]
METK_PSEA84.370e-4250.28S-adenosylmethionine synthetase OS=Pseudomonas aer... [more]
METK_PSEA74.370e-4250.28S-adenosylmethionine synthetase OS=Pseudomonas aer... [more]
METK_PROMA4.370e-4251.37S-adenosylmethionine synthetase OS=Prochlorococcus... [more]
METK_PROM14.370e-4252.17S-adenosylmethionine synthetase OS=Prochlorococcus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_13C05_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-13C05-F9-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043760 ID=CX043760; Name=CX043760; organism=Citrus sinensis; type=EST; length=849bp
CTTTTTTTAAGCAAAAGGAAGAATTTTACTAATTCCAGGCACCAGTTGAG
CAAAATTCTCAATCGATATCACTACACAACAGTGGTGACATGGTACATTA
AACCAAAACCAAAAAAGAAGTGGGGAAAGAAGAAAAAGAAAGGAATTGAA
TGGGGAACATGTATGAGTTCTGAACACAGGAGATTTGCTTAGTATTACAA
AGCAGCAGCAAGATAATATTCAAATTATTCATCCACTACCAATAGAAGCA
AACTTGAACAGCAGGGATAGTTTTCACTTTTCAACTCAAATTTAAGCTTG
AGGCTTTTCCCACTTGAGGGGCTTCACAACTTCCCAAGTGAAGTCTGGGT
CATCCCTGCCAAAGTGTCCATAGGCAGCAGTCTTCAAGAACCTGCCATTA
CCGCCCCTTTTGAGATCCAAATTGATGGTCATCATTCCTGGCCTGAAATC
AAAGCTTTCCTTCACAATTTTGAGGATCTCCTTGTCAGGAATCTTGCCGG
TTCCATATGAGTCCACAAAAACAGACAATGGCTCAGGCACACCAATGGCA
TAGGAGACTTGGACAATGCACCTGCGAGCAAGCCCGTTTGCAACAATGCT
CTTAGCAGCCTGCCTAACAATGTATGCACCACTCCTATCCACCTTAGTAG
GGTCTTTTCCAGAGAAAGCACCGCCACCATGGGCTCCCCAGCCACCATAA
GTGTCGATGATGATCTTACGTCCAGTGAGACCAGCATCACCATGAGGCCC
ACCAATGACAAAACGACCTGATGGATTAAGGTGGAAGATGGTCTTCTCAT
CAAGGTACTTCTCGGGGATGACAGGCTTAATGACGTGCTCCTTAAGGTC
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