CX043760

Overview
NameCX043760
Unique NameCX043760
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length849
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043760 vs. ExPASy Swiss-Prot
Match: METK_LEPIN (S-adenosylmethionine synthetase OS=Leptospira interrogans GN=metK PE=3 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 4.370e-42
Identity = 89/172 (51.74%), Postives = 120/172 (69.77%), Query Frame = -1
Query:  331 LKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 846
            L E  IK VIP   L+  T + +NP+G+F+IGGPHGDAGLTGRKII+DTY            GKDP+KVDRS AY+ R  AK++VA+GLA +C VQ++YAIGV EP+SV VD++GTGKI ++E++K ++ +F   P  +  +L L   G  ++ +TA+YGHFGR    FTWE
Sbjct:  207 LIEECIKKVIPANLLNN-TKYFINPTGQFIIGGPHGDAGLTGRKIIVDTYGGYGRHGGGAFSGKDPSKVDRSAAYMGRYIAKNVVASGLADKCEVQLAYAIGVAEPVSVHVDTFGTGKISEEELVKRIRANFKLTPRGIIESLKLLEKGR-KYRETASYGHFGRKGSTFTWE 376          
BLAST of CX043760 vs. ExPASy Swiss-Prot
Match: METK_LEPIC (S-adenosylmethionine synthetase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=metK PE=3 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 4.370e-42
Identity = 89/172 (51.74%), Postives = 120/172 (69.77%), Query Frame = -1
Query:  331 LKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 846
            L E  IK VIP   L+  T + +NP+G+F+IGGPHGDAGLTGRKII+DTY            GKDP+KVDRS AY+ R  AK++VA+GLA +C VQ++YAIGV EP+SV VD++GTGKI ++E++K ++ +F   P  +  +L L   G  ++ +TA+YGHFGR    FTWE
Sbjct:  207 LIEECIKKVIPANLLNN-TKYFINPTGQFIIGGPHGDAGLTGRKIIVDTYGGYGRHGGGAFSGKDPSKVDRSAAYMGRYIAKNVVASGLADKCEVQLAYAIGVAEPVSVHVDTFGTGKISEEELVKRIRANFKLTPRGIIESLKLLEKGR-KYRETASYGHFGRKGSTFTWE 376          
BLAST of CX043760 vs. ExPASy Swiss-Prot
Match: METK_EDWI9 (S-adenosylmethionine synthetase OS=Edwardsiella ictaluri (strain 93-146) GN=metK PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.370e-42
Identity = 89/170 (52.35%), Postives = 116/170 (68.24%), Query Frame = -1
Query:  331 EHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 840
            E +IKPV+P ++L   T + +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ ++++GT KI  + ++++V+E FD RP  +   LDL +     + +TAAYGHFGR+   F WE
Sbjct:  205 EEIIKPVLPAEWLSASTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSIMIETFGTEKIDQEHLIQLVREFFDLRPYGLIQMLDLIQ---PIYRQTAAYGHFGRE--QFPWE 369          
BLAST of CX043760 vs. ExPASy Swiss-Prot
Match: METK_BLOPB (S-adenosylmethionine synthetase OS=Blochmannia pennsylvanicus (strain BPEN) GN=metK PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.370e-42
Identity = 91/172 (52.91%), Postives = 115/172 (66.86%), Query Frame = -1
Query:  325 EHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVV 840
            E +IKPV+P K+L   TIF +NP GRFVIGGP  D GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGVP P+S+ ++++GT KI    +++++K  FDFRP  +   LDL R     + +TA YGHFGR+   F WE +
Sbjct:  207 EEIIKPVLPNKWLTNNTIFLINPGGRFVIGGPISDCGLTGRKIIVDTYGGIGRHGGGSFSGKDPSKVDRSAAYGARYVAKNIVAAGLADRCELQVSYAIGVPHPISMSIETFGTEKISHDILMQLIKNFFDFRPYGLIAMLDLLR---PIYKETAVYGHFGRE--CFPWEKI 373          
BLAST of CX043760 vs. ExPASy Swiss-Prot
Match: METK_ACTP2 (S-adenosylmethionine synthetase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=metK PE=3 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 4.370e-42
Identity = 86/170 (50.59%), Postives = 119/170 (70.00%), Query Frame = -1
Query:  331 EHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 840
            E +IKPV+P ++L + T + +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC +Q+SYAIGV +P S+ V+++GTG++ ++ ++K++ ++FD RP  +   LDL +     + +TAAYGHFGR+   F WE
Sbjct:  205 EEIIKPVLPSEWLSQNTKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGVADPTSIMVETFGTGRVSNETLVKLIYQNFDLRPYGLIKMLDLIQ---PIYRETAAYGHFGRE--HFPWE 369          
BLAST of CX043760 vs. ExPASy Swiss-Prot
Match: METK_SYNJA (S-adenosylmethionine synthetase OS=Synechococcus sp. (strain JA-3-3Ab) GN=metK PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.707e-42
Identity = 92/179 (51.40%), Postives = 117/179 (65.36%), Query Frame = -1
Query:  331 DLKEHVIKPVIPEKYL--DEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLK---RGGNGRFLK-TAAYGHFGRDDPDFTWE 849
            DL E V++PV  E  +  D  T F  NP+G+FVIGGP GDAGLTGRKII+DTY            GKDPTKVDRS AY  R  AK+IVA GLA++C VQVSYAIGV  P+++ V+++GTG+IPD+ +L++V+  FD RP  +     L+   R   GRF +  A YGHFG+   D  WE
Sbjct:  215 DLWEAVVQPVFAELPIKPDGNTRFLTNPTGKFVIGGPQGDAGLTGRKIIVDTYGGYSRHGGGAFSGKDPTKVDRSAAYAARYVAKNIVAAGLAQKCEVQVSYAIGVARPINLLVETFGTGRIPDEALLRLVQRHFDLRPAAILAQFQLRELPRQRGGRFYQNVAVYGHFGQTHLDLPWE 393          
BLAST of CX043760 vs. ExPASy Swiss-Prot
Match: METK_SHEPA (S-adenosylmethionine synthetase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=metK PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.707e-42
Identity = 89/170 (52.35%), Postives = 117/170 (68.82%), Query Frame = -1
Query:  331 EHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWE 840
            E +IKPV+P K+L + T + +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC +QVSYAIGV EP S+ ++++GT K+ ++ ++ +V+  FD RP  +T  L+L R     +  TAAYGHFGR+  +F WE
Sbjct:  206 ETIIKPVLPAKWLSKDTKYFINPTGRFVIGGPVGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQVSYAIGVAEPTSISIETFGTAKVGEELLIDLVRRHFDLRPYGLTEMLNLAR---PIYQATAAYGHFGRN--EFPWE 370          
BLAST of CX043760 vs. ExPASy Swiss-Prot
Match: METK_PSYA2 (S-adenosylmethionine synthetase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=metK PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.707e-42
Identity = 89/176 (50.57%), Postives = 121/176 (68.75%), Query Frame = -1
Query:  325 LKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPD--FTWEVV 846
            + E +IK V+P + L   T +H+NP+G+FVIGGP GDAGLTGRKII+DTY            GKDP+KVDRS AY VR  AK+IVA G+A RC VQVSYAIGV EP S+ ++++GT KI + EI+++++  FD RP  +T  L+L +     + +TA++GHFGR   +  FTWE +
Sbjct:  204 IMESIIKQVLPAELLHAGTRYHINPTGKFVIGGPVGDAGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAVRYVAKNIVAAGIADRCEVQVSYAIGVAEPTSISINTFGTNKISNDEIIRLIRTHFDLRPYGITRMLNLLQ---PMYQQTASFGHFGRQGSETAFTWEKI 376          
BLAST of CX043760 vs. ExPASy Swiss-Prot
Match: METK_LEUCK (S-adenosylmethionine synthetase OS=Leuconostoc citreum (strain KM20) GN=metK PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.707e-42
Identity = 86/175 (49.14%), Postives = 121/175 (69.14%), Query Frame = -1
Query:  325 DLKEHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVV 849
            D++E VI  V+P++ +D+KTI+++NPSGRFV+GGP  D+GLTGRKII+DTY            GKD TKVDRS AY  R  AK++VA G+A +  +Q++YAIGV +P+S+ +D++GT KI + +I  I  E FDFRP  +   L+L+R     + +TAA+GHFGR D D  WE +
Sbjct:  204 DVRELVIDQVLPQELVDDKTIYYINPSGRFVLGGPQADSGLTGRKIIVDTYGGAAHHGGGAFSGKDATKVDRSAAYFARYVAKNLVAAGVADKLELQIAYAIGVAQPVSLNIDTFGTAKIDEAKIRDITAELFDFRPLAIINQLNLRR---PIYKQTAAFGHFGRTDIDLPWEAL 375          
BLAST of CX043760 vs. ExPASy Swiss-Prot
Match: METK_HAES2 (S-adenosylmethionine synthetase OS=Haemophilus somnus (strain 2336) GN=metK PE=3 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 5.707e-42
Identity = 88/172 (51.16%), Postives = 119/172 (69.19%), Query Frame = -1
Query:  325 EHVIKPVIPEKYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYXXXXXXXXXXXXGKDPTKVDRSGAYIVRQAAKSIVANGLARRCIVQVSYAIGVPEPLSVFVDSYGTGKIPDKEILKIVKESFDFRPGMMTINLDLKRGGNGRFLKTAAYGHFGRDDPDFTWEVV 840
            E +IKP++P ++L ++T + +NP+GRFVIGGP GD GLTGRKII+DTY            GKDP+KVDRS AY  R  AK+IVA GLA RC +Q+SYAIGV EP S+ V+++GTGK+ ++ ++ +++E FD RP  +   LDL +     + +TAAYGHFGR    F WE V
Sbjct:  205 EEIIKPILPAEWLSKETKYFINPTGRFVIGGPMGDCGLTGRKIIVDTYGGAARHGGGAFSGKDPSKVDRSAAYAARYVAKNIVAAGLADRCEIQLSYAIGVAEPTSIMVETFGTGKVANELLVGLIREFFDLRPYGLIKMLDLIQ---PIYRQTAAYGHFGR--AQFPWEKV 371          
The following BLAST results are available for this feature:
BLAST of CX043760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METK_LEPIN4.370e-4251.74S-adenosylmethionine synthetase OS=Leptospira inte... [more]
METK_LEPIC4.370e-4251.74S-adenosylmethionine synthetase OS=Leptospira inte... [more]
METK_EDWI94.370e-4252.35S-adenosylmethionine synthetase OS=Edwardsiella ic... [more]
METK_BLOPB4.370e-4252.91S-adenosylmethionine synthetase OS=Blochmannia pen... [more]
METK_ACTP24.370e-4250.59S-adenosylmethionine synthetase OS=Actinobacillus ... [more]
METK_SYNJA5.707e-4251.40S-adenosylmethionine synthetase OS=Synechococcus s... [more]
METK_SHEPA5.707e-4252.35S-adenosylmethionine synthetase OS=Shewanella peal... [more]
METK_PSYA25.707e-4250.57S-adenosylmethionine synthetase OS=Psychrobacter a... [more]
METK_LEUCK5.707e-4249.14S-adenosylmethionine synthetase OS=Leuconostoc cit... [more]
METK_HAES25.707e-4251.16S-adenosylmethionine synthetase OS=Haemophilus som... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_13C05_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-13C05-F9-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043760 ID=CX043760; Name=CX043760; organism=Citrus sinensis; type=EST; length=849bp
CTTTTTTTAAGCAAAAGGAAGAATTTTACTAATTCCAGGCACCAGTTGAG
CAAAATTCTCAATCGATATCACTACACAACAGTGGTGACATGGTACATTA
AACCAAAACCAAAAAAGAAGTGGGGAAAGAAGAAAAAGAAAGGAATTGAA
TGGGGAACATGTATGAGTTCTGAACACAGGAGATTTGCTTAGTATTACAA
AGCAGCAGCAAGATAATATTCAAATTATTCATCCACTACCAATAGAAGCA
AACTTGAACAGCAGGGATAGTTTTCACTTTTCAACTCAAATTTAAGCTTG
AGGCTTTTCCCACTTGAGGGGCTTCACAACTTCCCAAGTGAAGTCTGGGT
CATCCCTGCCAAAGTGTCCATAGGCAGCAGTCTTCAAGAACCTGCCATTA
CCGCCCCTTTTGAGATCCAAATTGATGGTCATCATTCCTGGCCTGAAATC
AAAGCTTTCCTTCACAATTTTGAGGATCTCCTTGTCAGGAATCTTGCCGG
TTCCATATGAGTCCACAAAAACAGACAATGGCTCAGGCACACCAATGGCA
TAGGAGACTTGGACAATGCACCTGCGAGCAAGCCCGTTTGCAACAATGCT
CTTAGCAGCCTGCCTAACAATGTATGCACCACTCCTATCCACCTTAGTAG
GGTCTTTTCCAGAGAAAGCACCGCCACCATGGGCTCCCCAGCCACCATAA
GTGTCGATGATGATCTTACGTCCAGTGAGACCAGCATCACCATGAGGCCC
ACCAATGACAAAACGACCTGATGGATTAAGGTGGAAGATGGTCTTCTCAT
CAAGGTACTTCTCGGGGATGACAGGCTTAATGACGTGCTCCTTAAGGTC
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