DC900340

Overview
NameDC900340
Unique NameDC900340
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length803
Libraries
Library NameType
VSScdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of DC900340 vs. ExPASy Swiss-Prot
Match: PPIB_ASPFU (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus fumigatus GN=cpr2 PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 8.510e-37
Identity = 71/135 (52.59%), Postives = 85/135 (62.96%), Query Frame = 3
Query:  162 ALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSG-RTNKPVVIADCGQL 563
            AL TGEKG G       Y+GS+FHRVI  FM Q            +SIYG KFADENF  +HT  G+LSMANAG  TNGSQFF+ T  T WLDG+HVVFG+V+EG +VV+ IE V    G +  + V I   GQ+
Sbjct:   70 ALATGEKGFG-------YEGSTFHRVIKSFMIQGGDFTRGDGTGGKSIYGEKFADENFKLRHTRKGLLSMANAGKDTNGSQFFITTVPTPWLDGRHVVFGEVLEGYEVVEQIENVPKGPGDKPAETVKIVKSGQI 197          

HSP 2 Score: 43.5134 bits (101), Expect = 8.510e-37
Identity = 19/33 (57.58%), Postives = 24/33 (72.73%), Query Frame = 2
Query:   62 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFR 160
            KVFFD+  G +P GRIV+ L+    P+TAENFR
Sbjct:   37 KVFFDIEHGDKPLGRIVLGLYGKTVPKTAENFR 69          
BLAST of DC900340 vs. ExPASy Swiss-Prot
Match: PPIH_RHIOR (Peptidyl-prolyl cis-trans isomerase H OS=Rhizopus oryzae GN=cyp7 PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 1.113e-36
Identity = 64/135 (47.41%), Postives = 85/135 (62.96%), Query Frame = 3
Query:  165 LCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGS-KFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSS-SGRTNKPVVIADCGQL 563
            LCTGE    ++G P  YK   FHRVI  FM Q              IYG  +FADENF++KHTG G+LSMAN+GP +NG QFF+     ++LDGKHVVFG++V+G+  ++ IE V +  + R   PV I +CGQ+
Sbjct:   46 LCTGE--YKRNGVPQGYKNCLFHRVIKDFMVQGGDFIKGDGTGAMCIYGGDRFADENFIEKHTGAGLLSMANSGPNSNGCQFFITCDACDFLDGKHVVFGRLVDGLLTLRKIENVATGPNNRPKLPVKITECGQM 178          

HSP 2 Score: 53.5286 bits (127), Expect = 1.113e-36
Identity = 22/39 (56.41%), Postives = 31/39 (79.49%), Query Frame = 2
Query:   44 SKMPNPKVFFDMTVGGQPAGRIVMELFADVTPRTAENFR 160
            +++  P VFFD+++G  P GR+ MELF+D+ PRTAENFR
Sbjct:    6 NQVERPVVFFDISIGDVPVGRMKMELFSDIVPRTAENFR 44          
BLAST of DC900340 vs. ExPASy Swiss-Prot
Match: CYP5_CAEEL (Peptidyl-prolyl cis-trans isomerase 5 OS=Caenorhabditis elegans GN=cyn-5 PE=1 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 1.445e-36
Identity = 68/128 (53.12%), Postives = 80/128 (62.50%), Query Frame = 3
Query:  186 IGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSG-RTNKPVVIADCGQLS 566
            + K  K   Y GS FHRVI  FM Q             SIYG KFADENF  KH G G LSMANAG  TNGSQFF+ T KT WLDG+HVVFG+++EGMDVV+ IE+     G R  + V+IA  G ++
Sbjct:   64 LAKKPKGEGYPGSKFHRVIADFMIQGGDFTRGDGTGGRSIYGEKFADENFKLKHYGAGWLSMANAGADTNGSQFFITTVKTPWLDGRHVVFGKILEGMDVVRKIEQTEKLPGDRPKQDVIIAASGHIA 191          

HSP 2 Score: 45.4394 bits (106), Expect = 1.445e-36
Identity = 19/32 (59.38%), Postives = 24/32 (75.00%), Query Frame = 2
Query:   62 KVFFDMTVGGQPAGRIVMELFADVTPRTAENF 157
            KV+FDM +GG+P GRIV+ LF    P+TA NF
Sbjct:   30 KVYFDMEIGGKPIGRIVIGLFGKTVPKTATNF 61          
BLAST of DC900340 vs. ExPASy Swiss-Prot
Match: PPIB_NEUCR (Peptidyl-prolyl cis-trans isomerase B OS=Neurospora crassa GN=cpr-2 PE=3 SV=3)

HSP 1 Score: 130.183 bits (326), Expect = 1.870e-36
Identity = 73/136 (53.68%), Postives = 85/136 (62.50%), Query Frame = 3
Query:  162 ALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIE--KVGSSSGRTNKPVVIADCGQL 563
            AL TGEKG G       Y+GS+FHRVI  FM Q            +SIYG KF DENF  KH+  G+LSMANAG  TNGSQFF+ T  T WLDGKHVVFG+V+EG DVV+ IE  K G       +P+ IA  G+L
Sbjct:   69 ALATGEKGFG-------YEGSTFHRVIKQFMIQGGDFTKGDGTGGKSIYGDKFPDENFKLKHSKKGLLSMANAGKDTNGSQFFITTVITSWLDGKHVVFGEVLEGYDVVEKIENTKTGPRDAPA-EPIKIAKSGEL 196          

HSP 2 Score: 43.8986 bits (102), Expect = 1.870e-36
Identity = 19/33 (57.58%), Postives = 24/33 (72.73%), Query Frame = 2
Query:   62 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFR 160
            KV+FD+  G +P GRIVM L+    P+TAENFR
Sbjct:   36 KVYFDIEQGDKPLGRIVMGLYGKTVPKTAENFR 68          
BLAST of DC900340 vs. ExPASy Swiss-Prot
Match: PPIB_SCHPO (Peptidyl-prolyl cis-trans isomerase B OS=Schizosaccharomyces pombe GN=cyp4 PE=2 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 4.161e-36
Identity = 74/138 (53.62%), Postives = 86/138 (62.32%), Query Frame = 3
Query:  162 ALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP---VVIADCGQLS 566
            AL TGEKG G       Y+GS FHRVIP FM Q            +SIYGS+F DENF   H  PG+LSMANAGP +NGSQFF+ T KT WLDG HVVFG+V+ G D+VK I K  + +   +KP   V I   GQLS
Sbjct:   61 ALATGEKGFG-------YEGSIFHRVIPNFMIQGGDITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANAGPDSNGSQFFITTVKTPWLDGHHVVFGEVLSGYDIVKKISK--AETDNRDKPLEDVKIIKSGQLS 189          

HSP 2 Score: 38.5058 bits (88), Expect = 4.161e-36
Identity = 19/49 (38.78%), Postives = 29/49 (59.18%), Query Frame = 2
Query:   20 VFFSPINQSKMPN--PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFR 160
            +FF  I+ ++ P     V+FD+  G +  GR+ + LF    P+TAENFR
Sbjct:   12 LFFGLISANRGPKVTDTVYFDLQQGDEFLGRVTIGLFGKTVPKTAENFR 60          
BLAST of DC900340 vs. ExPASy Swiss-Prot
Match: PPIB_EMENI (Peptidyl-prolyl cis-trans isomerase B OS=Emericella nidulans GN=cpr2 PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.197e-35
Identity = 73/137 (53.28%), Postives = 87/137 (63.50%), Query Frame = 3
Query:  162 ALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKP---VVIADCGQL 563
            AL TGEKG G       Y+GS+FHRVI  FM Q            +SIYG+KF DENF  +HT  G+LSMANAG  TNGSQFF+ TA T WLDGKHVVFG+V+EG D+V  I+ V    GR ++P   V I   G+L
Sbjct:   68 ALATGEKGFG-------YEGSNFHRVIKDFMIQGGDFTRGDGTGGKSIYGAKFKDENFKLRHTKTGLLSMANAGKDTNGSQFFITTAVTPWLDGKHVVFGEVLEGYDIVDKIQNV--PKGRNDRPLKDVKIVKSGEL 195          

HSP 2 Score: 39.2762 bits (90), Expect = 1.197e-35
Identity = 20/46 (43.48%), Postives = 27/46 (58.70%), Query Frame = 2
Query:   35 INQSKMPNPK----VFFDMTVGGQPAGRIVMELFADVTPRTAENFR 160
            +N S+   PK    V+FD+  G +  GRIV+ L+    P TAENFR
Sbjct:   22 VNASEPRGPKITNKVYFDIQHGDESLGRIVLGLYGKTVPETAENFR 67          
BLAST of DC900340 vs. ExPASy Swiss-Prot
Match: PPIB_ASPOR (Peptidyl-prolyl cis-trans isomerase B OS=Aspergillus oryzae GN=cpr2 PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 2.035e-35
Identity = 72/135 (53.33%), Postives = 85/135 (62.96%), Query Frame = 3
Query:  162 ALCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVV-IADCGQL 563
            AL TGEKG G       Y+GS+FHRVI  FM Q            +SIYG KF DENF  +HT  G+LSMANAG  TNGSQFF+ T  T WLDG+HVVFG+V+EG +VV+AIE V    G   + VV I   G+L
Sbjct:   54 ALATGEKGFG-------YEGSTFHRVIKEFMIQGGDFTRGDGTGGKSIYGEKFKDENFKIRHTKKGLLSMANAGKDTNGSQFFITTVATPWLDGRHVVFGEVLEGYEVVEAIENVPKVPGDKPQQVVKIVKSGEL 181          

HSP 2 Score: 40.4318 bits (93), Expect = 2.035e-35
Identity = 16/32 (50.00%), Postives = 23/32 (71.88%), Query Frame = 2
Query:   65 VFFDMTVGGQPAGRIVMELFADVTPRTAENFR 160
            V+FD+  G +P GR+V+ L+    P+TAENFR
Sbjct:   22 VYFDIEHGNKPLGRVVLGLYGKTVPKTAENFR 53          
BLAST of DC900340 vs. ExPASy Swiss-Prot
Match: PPIA_PARPR (Peptidyl-prolyl cis-trans isomerase OS=Paramecium primaurelia PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 2.664e-35
Identity = 67/131 (51.15%), Postives = 78/131 (59.54%), Query Frame = 3
Query:  165 LCTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEKVGSSSGRTNKPVVIADCG 557
            L TG +G G       YKGS FHRVI  FM Q            +SIYG KFADENF  KHT P +LSMANAGP TNGSQFF+      WLDGKHVVFG+VV+G D ++  +K  S  G+    + I D G
Sbjct:   37 LATGSRGFG-------YKGSVFHRVITDFMAQGGDFTNFNGTGGKSIYGEKFADENFKLKHTKPALLSMANAGPNTNGSQFFITFVPCPWLDGKHVVFGEVVDGFDTLELFKKNSSQQGKPKTTIKIVDSG 160          

HSP 2 Score: 38.891 bits (89), Expect = 2.664e-35
Identity = 17/32 (53.12%), Postives = 22/32 (68.75%), Query Frame = 2
Query:   65 VFFDMTVGGQPAGRIVMELFADVTPRTAENFR 160
            VFFD+  GG    +IV +L+ DV P+TA NFR
Sbjct:    4 VFFDVQFGGDAPKKIVFKLYDDVVPKTAANFR 35          
BLAST of DC900340 vs. ExPASy Swiss-Prot
Match: PPIH_SCHPO (Peptidyl-prolyl cis-trans isomerase cyp3 OS=Schizosaccharomyces pombe GN=cyp3 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.692e-34
Identity = 67/135 (49.63%), Postives = 88/135 (65.19%), Query Frame = 3
Query:  168 CTGEKGIGKSGKPLHYKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSK-FADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVVEGMDVVKAIEK--VGSSSGRTNKPVVIADCGQL 563
            CTGE  +G + KP+ YK S+FHR+I GFM Q             +I+ S+ F DENF  KH  PG+LSMANAG  +NG QFF+ T   ++LDGKHVVFG+V+EG D+VK IE   VG++S R    V I +CG++
Sbjct:   41 CTGET-LGVNQKPIGYKNSTFHRIIQGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITTVPCDFLDGKHVVFGEVIEGYDIVKEIESTPVGANS-RPKSNVAIVECGEM 173          

HSP 2 Score: 41.2022 bits (95), Expect = 1.692e-34
Identity = 17/34 (50.00%), Postives = 24/34 (70.59%), Query Frame = 2
Query:   59 PKVFFDMTVGGQPAGRIVMELFADVTPRTAENFR 160
            P VF D+ + G+  GRI + LF+ + P+TAENFR
Sbjct:    5 PVVFMDIAIDGRLLGRIKIRLFSSIVPKTAENFR 38          
BLAST of DC900340 vs. ExPASy Swiss-Prot
Match: PPIA_NEOCA (Peptidyl-prolyl cis-trans isomerase OS=Neospora caninum PE=1 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 2.202e-34
Identity = 65/118 (55.08%), Postives = 77/118 (65.25%), Query Frame = 3
Query:  213 YKGSSFHRVIPGFMCQXXXXXXXXXXXXESIYGSKFADENFVKKHTGPGILSMANAGPGTNGSQFFVCTAKTEWLDGKHVVFGQVV-EGMDVVKAIEKVGSSSGRTNKPVVIADCGQL 563
            YKGS+FHRVI  FM Q             SIYG +F DENF  KH   G++SMANAGP TNGSQFF+ T KTEWLDG+HVVFG++  +    V+AIE +GSS GR +K   I D G L
Sbjct:   62 YKGSTFHRVIADFMIQGGDFENHNGTGGHSIYGPRFEDENFTLKHDR-GVISMANAGPNTNGSQFFITTVKTEWLDGRHVVFGKITNDSWPTVQAIEALGSSGGRPSKIAKITDIGLL 178          

HSP 2 Score: 41.9726 bits (97), Expect = 2.202e-34
Identity = 18/34 (52.94%), Postives = 24/34 (70.59%), Query Frame = 2
Query:   62 KVFFDMTVGGQPAGRIVMELFADVTPRTAENFRG 163
            K F D+ + G+ AGRIV+EL  DV P+T +NF G
Sbjct:   24 KAFMDIEIDGESAGRIVLELRGDVVPKTVKNFIG 57          
The following BLAST results are available for this feature:
BLAST of DC900340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 219
Match NameE-valueIdentityDescription
PPIB_ASPFU8.510e-3752.59Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPIH_RHIOR1.113e-3647.41Peptidyl-prolyl cis-trans isomerase H OS=Rhizopus ... [more]
CYP5_CAEEL1.445e-3653.13Peptidyl-prolyl cis-trans isomerase 5 OS=Caenorhab... [more]
PPIB_NEUCR1.870e-3653.68Peptidyl-prolyl cis-trans isomerase B OS=Neurospor... [more]
PPIB_SCHPO4.161e-3653.62Peptidyl-prolyl cis-trans isomerase B OS=Schizosac... [more]
PPIB_EMENI1.197e-3553.28Peptidyl-prolyl cis-trans isomerase B OS=Emericell... [more]
PPIB_ASPOR2.035e-3553.33Peptidyl-prolyl cis-trans isomerase B OS=Aspergill... [more]
PPIA_PARPR2.664e-3551.15Peptidyl-prolyl cis-trans isomerase OS=Paramecium ... [more]
PPIH_SCHPO1.692e-3449.63Peptidyl-prolyl cis-trans isomerase cyp3 OS=Schizo... [more]
PPIA_NEOCA2.202e-3455.08Peptidyl-prolyl cis-trans isomerase OS=Neospora ca... [more]

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Properties
Property NameValue
Genbank descriptionDC900340 VSS Citrus sinensis cDNA clone VS28691 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>DC900340 ID=DC900340; Name=DC900340; organism=Citrus sinensis; type=EST; length=803bp
AGAAGTCCGTGTTTAGTTTGTTTTTTTCTCTCCAATCAACCAATCAAAAA
TGCCAAACCCCAAAGTGTTCTTCGACATGACCGTCGGCGGTCAGCCCGCC
GGCAGGATCGTGATGGAGCTCTTCGCCGATGTCACCCCCCGAACCGCCGA
GAACTTCCGCGGCCCTCTGCACCGGCGAGAAAGGCATCGGCAAGTCCGGC
AAGCCACTCCACTACAAGGGCTCGTCCTTCCACCGTGTGATCCCCGGATT
CATGTGCCAGGGGGGAGACTTCACCGCCGGAAACGGAACCGGAGGCGAAT
CAATCTACGGCTCAAAATTCGCCGATGAGAACTTCGTGAAGAAGCACACC
GGCCCCGGAATCCTCTCCATGGCGAATGCCGGACCCGGAACCAACGGATC
TCAGTTCTTCGTCTGTACGGCCAAGACCGAGTGGCTCGATGGGAAGCACG
TTGTGTTCGGTCAAGTCGTCGAAGGAATGGACGTCGTCAAGGCCATCGAG
AAAGTGGGGTCCAGCTCCGGAAGGACCAACAAGCCCGTCGTGATCGCTGA
TTGCGGTCAATTGTCTTAGATTTGATCATGATAATGATCGCCATCATCAC
GAGCCGTCTGATCGCGATCGTGATGGTGATTATGTTATCTATTATTATGT
GGCCGTGTCTGTAGGACTTTTAATCTTTATCTAATTTTCCTGCTATGTTA
CTTGTTCGGGTTGGATCGGGTCTCCGGTGGTGGTTCTTGATGAACTGTTT
TTTATGTCTTTCTATGAGCTGCCTTTTTAAATAAGATAGGGCTTGTCTTG
TTA
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