DC900339
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UB2G1_MACFA (Ubiquitin-conjugating enzyme E2 G1 OS=Macaca fascicularis GN=UBE2G1 PE=2 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 2.080e-20 Identity = 27/65 (41.54%), Postives = 42/65 (64.62%), Query Frame = 3 Query: 69 INKELKDLQKDPPASCSAGPVAD-DMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 + ++L +L K+P SAG + D D++ W+ I+GP D+ + GGVF + FP DYP +PPK+ F Sbjct: 10 LRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKF 74 HSP 2 Score: 56.6102 bits (135), Expect = 2.080e-20 Identity = 24/75 (32.00%), Postives = 42/75 (56.00%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILKE-------------QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDR 447 +T+++HPN++ NG +C+ IL E +W P T+ +++S+ S+L DPN D P + A ++ DR Sbjct: 75 ITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEGRWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDR 149
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBE2S_XENTR (Ubiquitin-conjugating enzyme E2 S OS=Xenopus tropicalis GN=ube2s PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.682e-20 Identity = 32/79 (40.51%), Postives = 49/79 (62.03%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG 498 +TK+FHPN+++NG IC+++LK+ W L I VLL+I LL PNP+ L E + + +Y + AR T+ +A G Sbjct: 80 LTKIFHPNVSTNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYASRARLMTEIHAQG 158 HSP 2 Score: 50.447 bits (119), Expect = 2.682e-20 Identity = 23/66 (34.85%), Postives = 35/66 (53.03%), Query Frame = 3 Query: 63 KRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 +++ KE+ L DPP P +D+ Q I GP +P+AGG+F + + D+P PPK F Sbjct: 14 RQVYKEVSTLTSDPPEGIKIIPNEEDITDVQVNIEGPEGTPYAGGIFRMKLILGKDFPAAPPKGYF 79
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UB2SB_XENLA (Ubiquitin-conjugating enzyme E2 S-B OS=Xenopus laevis GN=ube2s-B PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.682e-20 Identity = 32/79 (40.51%), Postives = 48/79 (60.76%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG 498 +TK+FHPN+++NG IC+++LK+ W L I VLL+I LL PNP+ L E + + +Y + AR T +A G Sbjct: 80 LTKIFHPNVSNNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYASRARLMTDIHAQG 158 HSP 2 Score: 51.2174 bits (121), Expect = 2.682e-20 Identity = 24/66 (36.36%), Postives = 35/66 (53.03%), Query Frame = 3 Query: 63 KRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 +R+ KE+ L DPP P +D+ Q I GP +P+AGG+F + + D+P PPK F Sbjct: 14 RRVYKEVSTLTSDPPEGIKIIPNEEDITDVQVNIEGPEGTPYAGGMFRMKLILGKDFPAAPPKGYF 79
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBE2C_SPISO (Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima GN=UBE2C PE=1 SV=1) HSP 1 Score: 60.077 bits (144), Expect = 3.511e-20 Identity = 28/84 (33.33%), Postives = 45/84 (53.57%), Query Frame = 3 Query: 9 QTQTLRPQSLLRNSQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 Q + R + + SKR+ +EL+ L +A P D++F W AT+ GP D+ + + +++ FP DYP+KPP V F Sbjct: 15 QKERPRDMTTSKERHSVSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKF 98 HSP 2 Score: 59.3066 bits (142), Expect = 3.511e-20 Identity = 26/57 (45.61%), Postives = 39/57 (68.42%), Query Frame = 1 Query: 265 TKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMY 435 T +HPN++ +G+ICLDILKE W+ + + +LLS+ SLL +PN PL + A M+ Sbjct: 100 TPCWHPNVDQSGNICLDILKENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMW 156
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBE2S_RANCA (Ubiquitin-conjugating enzyme E2 S OS=Rana catesbeiana GN=ube2s PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.903e-20 Identity = 32/77 (41.56%), Postives = 48/77 (62.34%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 492 +TK+FHPN++SNG IC+++LK+ W L I VLL+I LL PNP+ L E + + +Y + AR T+ +A Sbjct: 80 LTKIFHPNVSSNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYASRARLMTEIHA 156 HSP 2 Score: 50.447 bits (119), Expect = 5.903e-20 Identity = 23/66 (34.85%), Postives = 36/66 (54.55%), Query Frame = 3 Query: 63 KRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 +++ KE+ L DPP P +D+ Q +I GP +P+AGG+F + + D+P PPK F Sbjct: 14 RQVYKEVSTLTPDPPEGIKIIPNEEDITDVQVSIEGPEGTPYAGGIFRMKLILGKDFPAAPPKGYF 79
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UB2SC_XENLA (Ubiquitin-conjugating enzyme E2 S-C OS=Xenopus laevis GN=ube2s-C PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.689e-19 Identity = 31/79 (39.24%), Postives = 49/79 (62.03%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG 498 +TK+FHPN+++NG IC+++LK+ W L I VLL+I LL PNP+ L E + + +Y + A+ T+ +A G Sbjct: 80 LTKIFHPNVSNNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYASRAKLMTEIHAQG 158 HSP 2 Score: 48.9062 bits (115), Expect = 1.689e-19 Identity = 23/66 (34.85%), Postives = 34/66 (51.52%), Query Frame = 3 Query: 63 KRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 +R+ KE+ L DPP P +D+ Q I GP +P+A G+F + + D+P PPK F Sbjct: 14 RRVYKEVSTLTSDPPEGIKIIPNEEDITDVQVHIEGPEGTPYAAGIFRMKLILGKDFPAAPPKGYF 79
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC7_CAEEL (Probable ubiquitin-conjugating enzyme E2 7 OS=Caenorhabditis elegans GN=ubc-7 PE=1 SV=1) HSP 1 Score: 60.8474 bits (146), Expect = 1.708e-19 Identity = 28/71 (39.44%), Postives = 44/71 (61.97%), Query Frame = 3 Query: 51 QMASKRINKELKDLQKDPPASCSAGPVAD-DMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 + +S + K+L D+++ P SAG V D D++ W+ ++GP D+ + GG F + FP DYP KPPK+ F Sbjct: 2 EQSSLLLKKQLADMRRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKF 72 HSP 2 Score: 56.225 bits (134), Expect = 1.708e-19 Identity = 25/79 (31.65%), Postives = 47/79 (59.49%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDIL-------------KEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 459 +++++HPNI+ G++C+ IL +E+W P T+ +LLS+ S+LTDPN + P + A M + + A+++ Sbjct: 73 ISEIWHPNIDKEGNVCISILHDPGDDKWGYERPEERWLPVHTVETILLSVISMLTDPNFESPANVDAAKMQRENYAEFK 151
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC19_ARATH (Ubiquitin carrier protein E2 19 OS=Arabidopsis thaliana GN=UBC19 PE=1 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 2.210e-19 Identity = 27/57 (47.37%), Postives = 39/57 (68.42%), Query Frame = 1 Query: 265 TKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMY 435 T FHPN++ G+ICLDIL+++WS A + +LLSI SLL +PN PL + A ++ Sbjct: 106 TCCFHPNVDLYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQLW 162 HSP 2 Score: 58.151 bits (139), Expect = 2.210e-19 Identity = 32/85 (37.65%), Postives = 42/85 (49.41%), Query Frame = 3 Query: 27 PQSLLRNSQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRY*GFPP 281 P + +S KR+ EL L SA P D++F W+ TI G D+ F G + +S+ F DYPFK PKV F F P Sbjct: 27 PPTKTVDSHSVLKRLQSELMGLMMGADPGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHP 111
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: COP10_ARATH (Constitutive photomorphogenesis protein 10 OS=Arabidopsis thaliana GN=COP10 PE=1 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 3.657e-19 Identity = 38/69 (55.07%), Postives = 52/69 (75.36%), Query Frame = 3 Query: 57 ASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFR 263 + KRI +E+ +L DPP CSAGP D+++HW ATI+GPS +P+ GG+F + I FP DYPFKPPK+ F+ Sbjct: 37 SGKRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFK 105 HSP 2 Score: 80.1073 bits (196), Expect = 1.217e-14 Identity = 39/107 (36.45%), Postives = 64/107 (59.81%), Query Frame = 1 Query: 193 GVYFL-------YPFISHLIIHSSHRRWPSVTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 492 G++FL YPF ++ T+++H N+++ G + ++IL++ WSPALTI+KVL +I S+ P P P +P IA +Y TDR K++ A+ WT ++A Sbjct: 83 GIFFLDIIFPSDYPFKPPKLVFK--------TRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSIFLKPEPYSPALPVIARLYLTDREKHDEVAKEWTLRFA 181
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBE2S_HUMAN (Ubiquitin-conjugating enzyme E2 S OS=Homo sapiens GN=UBE2S PE=1 SV=2) HSP 1 Score: 64.6994 bits (156), Expect = 3.710e-19 Identity = 30/74 (40.54%), Postives = 44/74 (59.46%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQ 483 +TK+FHPN+ +NG IC+++LK W+ L I VLL+I LL PNP+ L E + + +Y AR T+ Sbjct: 80 LTKIFHPNVGANGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEYAARARLLTE 153 HSP 2 Score: 51.2174 bits (121), Expect = 3.710e-19 Identity = 24/64 (37.50%), Postives = 34/64 (53.12%), Query Frame = 3 Query: 69 INKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 + KE+ L DPP P +D+ Q TI GP +P+AGG+F + + D+P PPK F Sbjct: 16 VYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYF 79 The following BLAST results are available for this feature:
BLAST of DC900339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 230
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900339 ID=DC900339; Name=DC900339; organism=Citrus sinensis; type=EST; length=689bpback to top |