DC900339
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBE2B_MOUSE (Ubiquitin-conjugating enzyme E2 B OS=Mus musculus GN=Ube2b PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.391e-26 Identity = 31/66 (46.97%), Postives = 49/66 (74.24%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 459 ++K+FHPN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P + A +Y+ ++ +YE Sbjct: 73 LSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYE 138 HSP 2 Score: 65.4698 bits (158), Expect = 1.391e-26 Identity = 29/71 (40.85%), Postives = 40/71 (56.34%), Query Frame = 3 Query: 48 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 S A +R+ ++ K LQ+DPP S P +++ W A I GP +PF G F + I F +YP KPP V F Sbjct: 2 STPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRF 72
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBE2B_HUMAN (Ubiquitin-conjugating enzyme E2 B OS=Homo sapiens GN=UBE2B PE=1 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.391e-26 Identity = 31/66 (46.97%), Postives = 49/66 (74.24%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 459 ++K+FHPN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P + A +Y+ ++ +YE Sbjct: 73 LSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYE 138 HSP 2 Score: 65.4698 bits (158), Expect = 1.391e-26 Identity = 29/71 (40.85%), Postives = 40/71 (56.34%), Query Frame = 3 Query: 48 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 S A +R+ ++ K LQ+DPP S P +++ W A I GP +PF G F + I F +YP KPP V F Sbjct: 2 STPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRF 72
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBE2B_BOVIN (Ubiquitin-conjugating enzyme E2 B OS=Bos taurus GN=UBE2B PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.391e-26 Identity = 31/66 (46.97%), Postives = 49/66 (74.24%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYE 459 ++K+FHPN+ ++GSICLDIL+ +WSP +S +L SI SLL +PNP+ P + A +Y+ ++ +YE Sbjct: 73 LSKMFHPNVYADGSICLDILQNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYE 138 HSP 2 Score: 65.4698 bits (158), Expect = 1.391e-26 Identity = 29/71 (40.85%), Postives = 40/71 (56.34%), Query Frame = 3 Query: 48 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 S A +R+ ++ K LQ+DPP S P +++ W A I GP +PF G F + I F +YP KPP V F Sbjct: 2 STPARRRLMRDFKRLQEDPPVGVSGAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRF 72
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBE2T_XENLA (Ubiquitin-conjugating enzyme E2 T OS=Xenopus laevis GN=ube2t PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.793e-26 Identity = 41/82 (50.00%), Postives = 59/82 (71.95%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILK----EQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAM 495 +T ++HPNI+S G ICLDILK W PAL IS VL SI L+++PNPDDPL+ +I+ +K +RA + + A+ WT+K+A+ Sbjct: 71 LTPIYHPNIDSAGRICLDILKLPPKGAWRPALNISTVLTSIQLLMSEPNPDDPLMADISSEFKYNRAVFFSNAKKWTEKHAL 152 HSP 2 Score: 54.299 bits (129), Expect = 1.793e-26 Identity = 26/65 (40.00%), Postives = 38/65 (58.46%), Query Frame = 3 Query: 66 RINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 R+ +EL+ L K+PP +M +A I+G S SP+ GG+F + I P YPF+PPK+ F Sbjct: 6 RLKRELQLLNKEPPPGVICWQNESNMDDLRAQIIGGSGSPYEGGIFNLEIIVPERYPFEPPKIRF 70
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC2_USTMA (Ubiquitin-conjugating enzyme E2 2 OS=Ustilago maydis GN=UBC2 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.338e-26 Identity = 33/77 (42.86%), Postives = 49/77 (63.64%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY-----ETTARSW 477 ++K+FHPN+ +NG +CLDIL+ +WSP ++ +L SI SLL DPNP+ P E A +Y+ + +Y T SW Sbjct: 73 LSKMFHPNVYANGELCLDILQNRWSPTYDVAAILTSIQSLLHDPNPNSPANAEAASLYRENMKEYVRRVKATVEASW 149 HSP 2 Score: 67.0106 bits (162), Expect = 2.338e-26 Identity = 30/71 (42.25%), Postives = 40/71 (56.34%), Query Frame = 3 Query: 48 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 S + KR+ ++ K L DPP S P AD++ W A I GP+D+PF G F + + F YP KPP V F Sbjct: 2 STPSKKRLIRDFKRLSTDPPGGISGAPCADNLMIWNAVIFGPADTPFEDGTFKLVLTFDESYPNKPPTVKF 72
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC2_DICDI (Ubiquitin-conjugating enzyme E2 2 OS=Dictyostelium discoideum GN=ubc2 PE=3 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 2.357e-26 Identity = 35/78 (44.87%), Postives = 53/78 (67.95%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY-----ETTARSWT 480 ++K+FHPN+ ++GSICLDIL+ QWSP I+ +L SI SLL DPNP+ P E A +++ ++ +Y E +SW+ Sbjct: 73 LSKMFHPNVYADGSICLDILQNQWSPIYDIAAILTSIQSLLCDPNPNSPANSESARLFRENKREYNRKVKEIVEQSWS 150 HSP 2 Score: 63.929 bits (154), Expect = 2.357e-26 Identity = 29/71 (40.85%), Postives = 41/71 (57.75%), Query Frame = 3 Query: 48 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 S A +R+ ++ K LQ DPPA S P+ +++ WQA I GP DS + G F +S+ F +YP P V F Sbjct: 2 STAARRRLMRDFKRLQSDPPAGISGAPLENNILMWQAVIFGPDDSIWEGATFKLSLQFSEEYPNDAPTVKF 72
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC2_CANGA (Ubiquitin-conjugating enzyme E2 2 OS=Candida glabrata GN=UBC2 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 5.176e-26 Identity = 32/77 (41.56%), Postives = 50/77 (64.94%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY-----ETTARSW 477 ++++FHPN+ +NG ICLDIL+ +W+P ++ +L SI SL DPNP P E A ++K +++Y ET +SW Sbjct: 73 LSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYIKRVKETVEKSW 149 HSP 2 Score: 65.855 bits (159), Expect = 5.176e-26 Identity = 28/71 (39.44%), Postives = 44/71 (61.97%), Query Frame = 3 Query: 48 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 S A +R+ ++ K +++D P SA P+ D++ W A I+GP+D+P+ G F + + F DYP KPP V F Sbjct: 2 STPARRRLMRDFKRMKEDSPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEDYPNKPPHVKF 72
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC2_YEAST (Ubiquitin-conjugating enzyme E2 2 OS=Saccharomyces cerevisiae GN=RAD6 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.484e-25 Identity = 32/77 (41.56%), Postives = 50/77 (64.94%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY-----ETTARSW 477 ++++FHPN+ +NG ICLDIL+ +W+P ++ +L SI SL DPNP P E A ++K +++Y ET +SW Sbjct: 73 LSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSW 149 HSP 2 Score: 64.3142 bits (155), Expect = 1.484e-25 Identity = 27/71 (38.03%), Postives = 44/71 (61.97%), Query Frame = 3 Query: 48 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 S A +R+ ++ K +++D P SA P+ D++ W A I+GP+D+P+ G F + + F +YP KPP V F Sbjct: 2 STPARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKF 72
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC2_ASHGO (Ubiquitin-conjugating enzyme E2 2 OS=Ashbya gossypii GN=UBC2 PE=3 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.485e-25 Identity = 32/77 (41.56%), Postives = 50/77 (64.94%), Query Frame = 1 Query: 262 VTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKY-----ETTARSW 477 ++++FHPN+ +NG ICLDIL+ +W+P ++ +L SI SL DPNP P E A ++K +++Y ET +SW Sbjct: 73 LSEMFHPNVYANGEICLDILQNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSW 149 HSP 2 Score: 64.3142 bits (155), Expect = 1.485e-25 Identity = 27/71 (38.03%), Postives = 44/71 (61.97%), Query Frame = 3 Query: 48 SQMASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 S A +R+ ++ K +++D P SA P+ D++ W A I+GP+D+P+ G F + + F +YP KPP V F Sbjct: 2 STPARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKF 72
BLAST of DC900339 vs. ExPASy Swiss-Prot
Match: UBC27_ARATH (Ubiquitin carrier protein E2 27 OS=Arabidopsis thaliana GN=UBC27 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.504e-25 Identity = 40/77 (51.95%), Postives = 55/77 (71.43%), Query Frame = 1 Query: 265 TKVFHPNINS-NGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYA 492 TKV+HPNI+S +G+ICLDILK+QWSPALT+ L+SI +LL+ P P DP +A Y + + +TAR WT+ +A Sbjct: 73 TKVWHPNISSQSGAICLDILKDQWSPALTLKTALVSIQALLSAPEPKDPQDAVVAEQYMKNYQVFVSTARYWTETFA 149 HSP 2 Score: 54.299 bits (129), Expect = 2.504e-25 Identity = 26/66 (39.39%), Postives = 39/66 (59.09%), Query Frame = 3 Query: 66 RINKELKDLQKDPPAS-CSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 260 RI KEL+D +++ +S P +D++ TI GP +P+ GG F + I P YPF+PPK+ F Sbjct: 6 RIQKELQDCERNQDSSGIRVCPKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFEPPKMQF 71 The following BLAST results are available for this feature:
BLAST of DC900339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 230
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900339 ID=DC900339; Name=DC900339; organism=Citrus sinensis; type=EST; length=689bpback to top |