CX043703

Overview
NameCX043703
Unique NameCX043703
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length650
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043703 vs. ExPASy Swiss-Prot
Match: CHI2_RHIOL (Chitinase 2 OS=Rhizopus oligosporus GN=CHI2 PE=1 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.129e-27
Identity = 70/157 (44.59%), Postives = 92/157 (58.60%), Query Frame = -2
Query:  188 WDHFLGGQSSSRPLGDAVLDGIDFDIEGGSNQYWDELARAL-SNFSQQKKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFYNNPPCQYSGNADNFKNSWNQW--TSNLFGFGQVFLGLPGSPEAAGSGYIPPDVLTFQVLPAIKNSPKYGGVMLW 649
            W+ F GG S +RP GDAV+DG+D DIEGGS+  +     AL   FS      + AAPQCP+PDA LG  L +  FDYV VQFYNN  C  +G++ NF ++W+ W  T++     ++   +PGS  AAGSGY+P   L   V         YGGV +W
Sbjct:  140 WNLFGGGNSDTRPFGDAVIDGVDLDIEGGSSTGYVAFVNALRQKFSSN--FLIGAAPQCPFPDAILGSVLNSASFDYVNVQFYNN-YCSATGSSFNF-DTWDNWAKTTSPNKNVKIMFTVPGSSTAAGSGYVPMSTLQTIVPSLASKYSSYGGVSVW 292          
BLAST of CX043703 vs. ExPASy Swiss-Prot
Match: CONB_CANEN (Concanavalin B OS=Canavalia ensiformis PE=1 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.074e-25
Identity = 70/163 (42.94%), Postives = 92/163 (56.44%), Query Frame = -2
Query:  152 PLGDAVLDGIDFDIEGGSNQY-WDELARALSNFSQ--QKKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFYNNPPCQYS-GNADNFKNSWNQWTSNLFGFGQ-VFLGLPGSPEAA-GSGYIPPDVLTFQVLPAIKN-SPKYGGVMLWFRQYDK--SYSSAI 613
            PLG   LDGI FDI+   ++  WD L   L       Q    L+AAP C  PD +L  A+ T  FDY++V+FYN+  CQYS GN    +N+W  WT +++   + +FL LP S   A G GYIPP  L  QVLP + +   +Y G+ LW RQ DK   YS+ I
Sbjct:  142 PLGKVALDGIHFDIQKPVDELNWDNLLEELYQIKDVYQSTFLLSAAPGCLSPDEYLDNAIQTRHFDYIFVRFYNDRSCQYSTGNIQRIRNAWLSWTKSVYPRDKNLFLELPASQATAPGGGYIPPSALIGQVLPYLPDLQTRYAGIALWNRQADKETGYSTNI 304          
BLAST of CX043703 vs. ExPASy Swiss-Prot
Match: CHI1_CANAL (Chitinase 1 OS=Candida albicans GN=CHT1 PE=3 SV=2)

HSP 1 Score: 111.694 bits (278), Expect = 3.399e-24
Identity = 60/157 (38.22%), Postives = 89/157 (56.69%), Query Frame = -2
Query:  188 WDHFLGGQSSSRPLGDAVLDGIDFDIEGGSNQYWDELARALSNF--SQQKKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFYNNPPCQYSGNADNFKNSWNQWTSNLFGFG-QVFLGLPGSPEAAGSGYIPPDVLTFQVLPAIKNSPKYGGVMLW 649
            W+ F GG+ S RP  DA++DG DFDIE      +  LA  L  +  +  K  YL+AAPQCPYPD  +G  +     D+ ++QFYNN    Y      F  +WN W++   G   +++LGLPGS  +AGSG++    +  +V+ +IK    +GG+ +W
Sbjct:  121 WNKFGGGKDSERPFDDAIVDGFDFDIENKDQTGYAALATQLRKYFSTGTKSYYLSAAPQCPYPDESVGDLMSQVDLDFAFIQFYNN----YCSLNQQF--NWNSWSNYARGKSIKLYLGLPGSSSSAGSGFVGLSTVQ-RVVASIKGDSSFGGISIW 270          
BLAST of CX043703 vs. ExPASy Swiss-Prot
Match: CHI1_RHINI (Chitinase 1 OS=Rhizopus niveus GN=CHI1 PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 9.889e-24
Identity = 67/156 (42.95%), Postives = 85/156 (54.49%), Query Frame = -2
Query:  188 WDHFLGGQSSSRPLGDAVLDGIDFDIEGGSNQYWDELARALSNFSQQKKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFYNNPPCQYSGNADNFKNSWNQWTSNLFGFG--QVFLGLPGSPEAAGSGYIPPDVLTFQVLPAIKNSPKYGGVMLW 649
            W+ F GG S +RP  DAV+DGID DIEGGS+  +     AL +   +    + AAPQCP+PDA LG  +     D+V VQFYNN     SG++ NF + WN W  N       +V L +PGS  AAGSGY     L   V   I     +GGV +W
Sbjct:  138 WNLFGGGTSDTRPFDDAVIDGIDLDIEGGSSTGYAAFVTALRS---KGHFLIGAAPQCPFPDAILGSVIDAVGLDFVNVQFYNNVCSVASGSSFNF-DVWNDWAKNKSPNKNIKVMLTVPGSSTAAGSGYASIAELGPIVSSVISQYSSFGGVSVW 289          
BLAST of CX043703 vs. ExPASy Swiss-Prot
Match: CHIT_YEAST (Endochitinase OS=Saccharomyces cerevisiae GN=CTS1 PE=1 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 1.292e-23
Identity = 66/162 (40.74%), Postives = 87/162 (53.70%), Query Frame = -2
Query:  188 WDHFLGGQSSS-RPLGDAVLDGIDFDIEGGSNQYWDELARALSNFSQQ--KKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFYNNPPCQYSGNADNFKNSWNQWTSNLFGFG-----QVFLGLPGSPEAAGSGYIPPDVLTFQVLPAIKNSPKYGGVMLW 649
            WD F  G  +S RP   AV+DG DFDIE  +   +  LA  L     +  K+ YL+AAPQCPYPDA +G  L     D+ ++QFYNN  C  SG     + +W+ W +           ++FLGLPGS  AAGSGYI    L    +  I +S  +GG+ LW
Sbjct:  130 WDTFGEGTGASERPFDSAVVDGFDFDIENNNEVGYSALATKLRTLFAEGTKQYYLSAAPQCPYPDASVGDLLENADIDFAFIQFYNN-YCSVSG-----QFNWDTWLTYAQTVSPNKNIKLFLGLPGSASAAGSGYISDTSLLESTIADIASSSSFGGIALW 285          
BLAST of CX043703 vs. ExPASy Swiss-Prot
Match: CHI3_CANAL (Chitinase 3 OS=Candida albicans GN=CHT3 PE=3 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 5.426e-22
Identity = 64/165 (38.79%), Postives = 88/165 (53.33%), Query Frame = -2
Query:  188 WDHFLGGQS---SSRPLGDAVLDGIDFDIEGGSNQYWDELARALSNFSQQ---KKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFYNNPPCQYSGNADNFKNSWNQW-----TSNLFGFGQVFLGLPGSPEAAGSGYIPPDVLTFQVLPAIKNSPKYGGVMLW 649
            WD F   ++   + RP  DAVLDG DFDIE   +  +  LA  L    Q+   K  YL AAPQCPYPDA +G  L     D+V++QFYNN  C    ++ N    W+ W     T +     ++F+G+P S  AAGSGY  P  ++  +   I NS  +GG+ +W
Sbjct:  128 WDLFGNSKNLATNDRPFYDAVLDGFDFDIENNWSTGYPALATELRTLFQKDTSKNYYLGAAPQCPYPDASVGPLLKQSEIDFVFIQFYNN-YCNLGSSSFN----WDTWLNYAETDSPNKNIKLFVGVPASSRAAGSGYNDPSAVSQYLTSDILNSKYFGGISMW 287          
BLAST of CX043703 vs. ExPASy Swiss-Prot
Match: XIP1_ORYSJ (Xylanase inhibitor protein 1 OS=Oryza sativa subsp. japonica GN=RIXI PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 4.594e-21
Identity = 59/176 (33.52%), Postives = 94/176 (53.41%), Query Frame = -2
Query:  149 WDHFLGGQSSS--RPLGDAVLDGIDFDIEGGSNQYWDELARALSNFSQQKK----VYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFYNNPPCQYS-GNADNFKNSWNQWTSNLFGFGQVFLGLPGSPEAAGSGYIPPDVLTFQVLPAIKNSPKYGGVMLWFRQYDK--SYSSAIK 649
            W+  + G+     RP GDA +DGIDF I+ G+  ++D+LAR L  +++  +    V L A  +C +PD  +  AL T LF+ + V+FY++  C Y+          WN+WT+   G   V+LGL  +     +  +    L + +LP ++ +  YGG+MLW R YDK   Y   +K
Sbjct:  127 WNAHMDGRRPGVFRPFGDAAVDGIDFFIDQGAPDHYDDLARNLYAYNKMYRARTPVRLTATVRCAFPDPRMKKALDTKLFERIHVRFYDDATCSYNHAGLAGVMAQWNKWTARYPG-SHVYLGLAAANVPGKNDNVFIKQLYYDLLPNVQKAKNYGGIMLWDRFYDKQTGYGKTVK 301          
BLAST of CX043703 vs. ExPASy Swiss-Prot
Match: XIP2_ORYSJ (Xylanase inhibitor protein 2 OS=Oryza sativa subsp. japonica GN=Chib3H-h PE=1 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.521e-19
Identity = 57/167 (34.13%), Postives = 93/167 (55.69%), Query Frame = -2
Query:  170 WDHFLGGQSS--SRPLGD-AVLDGIDFDIEGGSNQYWDELARALSNFSQQKK----VYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFYNNPPCQYSGNADNFKNSWNQWTSNLFGFGQVFLGLPGSPEAAGSGYIPPDVLTFQVLPAIKNSPKYGGVMLWFRQYDK 649
            W+ +LGG  +  +RP GD A +DGIDF I+ G   ++D+LAR L  +++  +    V L A  +C YPD  L  AL TG+F  + V+ + +  C  S      + SW +W +  F   +V++GL  SPE   +     D L +++L  +++ P YGG+ ++ R +DK
Sbjct:  123 WNAYLGGHRAGVARPFGDDAAVDGIDFFIDQGGADHYDDLARRLDGYNKYYRGRVGVLLTATTRCSYPDHRLEKALATGVFARIHVRMFGDEQCTMSP-----RYSWEKWAA-AFPGSKVYIGLVASPEQDSAWMFQKD-LYYEMLQFVRSLPNYGGLAIYDRYFDK 282          
BLAST of CX043703 vs. ExPASy Swiss-Prot
Match: CHI2_CANAL (Chitinase 2 OS=Candida albicans GN=CHT2 PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.299e-19
Identity = 59/158 (37.34%), Postives = 87/158 (55.06%), Query Frame = -2
Query:  188 WDHFLGGQSSSRPLGDAVLDGIDFDIEGGSNQYWDELARAL-SNFSQQ--KKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFYNNPPCQYSGNADNFKNSWNQWTSNLFGFG-QVFLGLPGSPEAAGSGYIPPDVLTFQVLPAIKNSPKYGGVMLW 649
            W+ F  G+   RP  DAV+DG DFDIE G    + ELA AL   F++   K  +L+AAPQCPYPDA LG  L     D+ ++QFYNN  C  +G  +   ++W+++  +      ++F+G+P +   A  GY+    L+   +  IK    + GV LW
Sbjct:  127 WNKFGAGEDPERPFDDAVVDGFDFDIEHGGATGYPELATALRGKFAKDTSKNYFLSAAPQCPYPDASLGDLLSKVPLDFAFIQFYNN-YCSINGQFN--YDTWSKFADSAPNKNIKLFVGVPATSNIA--GYVDTSKLS-SAIEEIKCDSHFAGVSLW 278          
BLAST of CX043703 vs. ExPASy Swiss-Prot
Match: CHI2_COCP7 (Endochitinase 2 OS=Coccidioides posadasii (strain C735) GN=CTS2 PE=3 SV=2)

HSP 1 Score: 92.8189 bits (229), Expect = 1.634e-18
Identity = 55/155 (35.48%), Postives = 82/155 (52.90%), Query Frame = -2
Query:  188 RPLGDAVLDGIDFDIEGGSNQYWDELARALSNFSQQ---KKVYLAAAPQCPYPDAWLGGALGTGLFDYVWVQFYNNPPC---QYSGNADNFKNSWNQWTSNLFGFG----QVFLGLPGSPEAAG-SGYIPPDVLTFQVLPAIKNSPK-YGGVMLW 616
            RP G+A +DG DFDIE GSN  +  + R L     Q    + Y++AAPQC  PD +L  A+    FD++++QFYNNP C   ++  N  +   + + W   +   G    ++F+GLP S  AA    Y+ P   T  V   +   P  +GG+M+W
Sbjct:  160 RPFGEASVDGFDFDIEKGSNFGYSIMVRRLRELFLQDPLNRYYISAAPQCIMPDKYLSHAISNSAFDFIFIQFYNNPSCSAKRWVTNPKSVTYTVDDWVKYIRKSGNPLAKLFIGLPASKSAAAKEDYLTPGEATKIVSTYMAKYPSTFGGMMVW 314          
The following BLAST results are available for this feature:
BLAST of CX043703 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
CHI2_RHIOL1.129e-2744.59Chitinase 2 OS=Rhizopus oligosporus GN=CHI2 PE=1 S... [more]
CONB_CANEN3.074e-2542.94Concanavalin B OS=Canavalia ensiformis PE=1 SV=1[more]
CHI1_CANAL3.399e-2438.22Chitinase 1 OS=Candida albicans GN=CHT1 PE=3 SV=2[more]
CHI1_RHINI9.889e-2442.95Chitinase 1 OS=Rhizopus niveus GN=CHI1 PE=3 SV=1[more]
CHIT_YEAST1.292e-2340.74Endochitinase OS=Saccharomyces cerevisiae GN=CTS1 ... [more]
CHI3_CANAL5.426e-2238.79Chitinase 3 OS=Candida albicans GN=CHT3 PE=3 SV=2[more]
XIP1_ORYSJ4.594e-2133.52Xylanase inhibitor protein 1 OS=Oryza sativa subsp... [more]
XIP2_ORYSJ2.521e-1934.13Xylanase inhibitor protein 2 OS=Oryza sativa subsp... [more]
CHI2_CANAL4.299e-1937.34Chitinase 2 OS=Candida albicans GN=CHT2 PE=3 SV=1[more]
CHI2_COCP71.634e-1835.48Endochitinase 2 OS=Coccidioides posadasii (strain ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_12H10_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-12H10-O20-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043703 ID=CX043703; Name=CX043703; organism=Citrus sinensis; type=EST; length=650bp
TTTTTTTTTTTTTTTTTACATGCCAAAGCTATTGCTCTAAATTTATTGCG
TGTGATTATACAATATTCTTATTTCATGTAAATTTATTAATTATTTTAAG
GTGAAAAAAATATTCTCAGGTAATATGGTGTATGGTTCAAACACTGGATT
TAATAGCTGAGCTATAACTCTTGTCATACTGCCTAAACCAAAGCATGACT
CCTCCGTATTTTGGGGAATTCTTAATAGCCGGCAAAACCTGAAATGTAAG
CACATCAGGGGGAATATAGCCGCTCCCGGCTGCTTCAGGAGACCCTGGCA
ATCCCAAAAATACTTGGCCAAAACCAAATAGATTTGATGTCCATTGATTC
CAACTGTTCTTGAAATTATCCGCATTGCCGGAATACTGACAAGGAGGATT
GTTATAGAATTGGACCCAAACGTAATCAAATAAGCCAGTTCCTAGTGCAC
CGCCAAGCCATGCATCAGGGTACGGACATTGTGGAGCTGCTGCTAAGTAA
ACCTTCTTCTGTTGGCTAAAATTTGACAAGGCCCTGGCTAGTTCGTCCCA
GTATTGGTTTGAGCCTCCCTCAATATCGAAATCGATTCCATCTAAAACTG
CATCACCTAAGGGCCGGGAGCTTGATTGGCCTCCAAGAAAATGGTCCCAC
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