DC900327
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900327 vs. ExPASy Swiss-Prot
Match: COF1_MACFA (Cofilin-1 OS=Macaca fascicularis GN=CFL1 PE=2 SV=3) HSP 1 Score: 73.9442 bits (180), Expect = 4.588e-13 Identity = 39/82 (47.56%), Postives = 56/82 (68.29%), Query Frame = 2 Query: 5 LGEPTQTYED----FAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQA 238 +G+ QT +D F LP ++CRYA+YD + T E+ +K + FI W+P+ A ++SKMIYASSKD K++L GI+ ELQA Sbjct: 57 VGDVGQTVDDPYATFVKMLPDKDCRYALYDATYETKES-KKEDLVFIFWAPECAPLKSKMIYASSKDAIKKKLTGIKHELQA 137
BLAST of DC900327 vs. ExPASy Swiss-Prot
Match: COF1_BOVIN (Cofilin-1 OS=Bos taurus GN=CFL1 PE=2 SV=3) HSP 1 Score: 73.9442 bits (180), Expect = 4.588e-13 Identity = 39/82 (47.56%), Postives = 56/82 (68.29%), Query Frame = 2 Query: 5 LGEPTQTYED----FAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQA 238 +G+ QT +D F LP ++CRYA+YD + T E+ +K + FI W+P+ A ++SKMIYASSKD K++L GI+ ELQA Sbjct: 57 VGDVGQTVDDPYATFVKMLPDKDCRYALYDATYETKES-KKEDLVFIFWAPECAPLKSKMIYASSKDAIKKKLTGIKHELQA 137
BLAST of DC900327 vs. ExPASy Swiss-Prot
Match: COF2_XENTR (Cofilin-2 OS=Xenopus tropicalis GN=cfl2 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.992e-13 Identity = 39/85 (45.88%), Postives = 52/85 (61.18%), Query Frame = 2 Query: 26 YEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDR 280 Y F LP ++CRY +YD + T E+ +K + FI W+PD A ++SKMIYASSKD K++ GI+ E Q GLD KDR Sbjct: 68 YRTFVNLLPLDDCRYGLYDATYETKES-KKEDLVFIFWAPDNAPLKSKMIYASSKDAIKKKFTGIKHEWQVN-----GLDDIKDR 146
BLAST of DC900327 vs. ExPASy Swiss-Prot
Match: CADF_DROME (Cofilin/actin-depolymerizing factor homolog OS=Drosophila melanogaster GN=tsr PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 5.992e-13 Identity = 36/95 (37.89%), Postives = 60/95 (63.16%), Query Frame = 2 Query: 11 EPTQTYEDFAASLPAEECRYAVYDYDFV-----TAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDR 280 E Q ED P E CRY ++D++++ T+E+ +K ++F ++W PDTA+V+ KM+Y+SS D K+ L G+Q +QATD SE + +++ Sbjct: 48 EYDQFLEDIQKCGPGE-CRYGLFDFEYMHQCQGTSESSKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASREAVEEK 141
BLAST of DC900327 vs. ExPASy Swiss-Prot
Match: COF2_CHICK (Cofilin-2 OS=Gallus gallus GN=CFL2 PE=1 SV=2) HSP 1 Score: 73.1738 bits (178), Expect = 7.825e-13 Identity = 39/86 (45.35%), Postives = 54/86 (62.79%), Query Frame = 2 Query: 26 YEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDRA 283 Y F LP +CRYA+YD + T E+ +K + FI W+P++A ++SKMIYASSKD K++ GI+ E Q GLD KDR+ Sbjct: 68 YTAFVKLLPLNDCRYALYDATYETKES-KKEDLVFIFWAPESAPLKSKMIYASSKDAIKKKFTGIKHEWQVN-----GLDDIKDRS 147
BLAST of DC900327 vs. ExPASy Swiss-Prot
Match: COF4_DICDI (Cofilin-4 OS=Dictyostelium discoideum GN=cofE PE=3 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 8.652e-12 Identity = 25/87 (28.74%), Postives = 58/87 (66.67%), Query Frame = 2 Query: 20 QTYEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLDVFKDR 280 +++ED+ P ++CRY VYD+ ++ + +K++IFFI+W P ++++K+++ +++ ++L GI ++ATD +E+ + ++R Sbjct: 47 ESFEDYINKFPQDDCRYGVYDFSYMDNKENKKNKIFFISWCPVETKIKNKIVHTATEQSIYKKLVGIDAIIKATDNTEISQSLVEER 133
BLAST of DC900327 vs. ExPASy Swiss-Prot
Match: COFI_GIBZE (Cofilin OS=Gibberella zeae GN=COF1 PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.476e-11 Identity = 35/68 (51.47%), Postives = 46/68 (67.65%), Query Frame = 2 Query: 65 RYAVYDYDFVTAENCQ-KSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQATDPSEMGLD 265 RYAVYD+++ A +++I FIAWSPD A ++ KMIYASSK+ KR L GI ELQA D ++ D Sbjct: 65 RYAVYDFEYNLASGDGIRNKITFIAWSPDDAGIQPKMIYASSKEALKRSLTGIATELQANDTDDIEYD 132
BLAST of DC900327 vs. ExPASy Swiss-Prot
Match: COF1A_XENLA (Cofilin-1-A OS=Xenopus laevis GN=cfl1-A PE=1 SV=3) HSP 1 Score: 68.1662 bits (165), Expect = 2.517e-11 Identity = 33/70 (47.14%), Postives = 46/70 (65.71%), Query Frame = 2 Query: 26 YEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQ 235 Y+ F LP +CRYA+YD + T E +K + F+ W+P+ A ++SKMIYASSKD K+ L GI+ E Q Sbjct: 68 YKTFVKMLPRNDCRYALYDALYETKET-KKEDLVFVFWAPEEASLKSKMIYASSKDAIKKRLPGIKHEWQ 136
BLAST of DC900327 vs. ExPASy Swiss-Prot
Match: COF1_XENTR (Cofilin-1 OS=Xenopus tropicalis GN=cfl1 PE=2 SV=3) HSP 1 Score: 66.2402 bits (160), Expect = 9.566e-11 Identity = 32/70 (45.71%), Postives = 45/70 (64.29%), Query Frame = 2 Query: 26 YEDFAASLPAEECRYAVYDYDFVTAENCQKSRIFFIAWSPDTARVRSKMIYASSKDRFKRELDGIQVELQ 235 Y+ F LP +CRYA+YD + T E +K + F+ W+P+ A ++SKMIYASSKD K+ GI+ E Q Sbjct: 68 YKAFVKMLPRNDCRYALYDALYETKET-KKEDLVFVFWAPEEASLKSKMIYASSKDAIKKRFPGIKHEWQ 136 The following BLAST results are available for this feature:
BLAST of DC900327 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 69
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900327 ID=DC900327; Name=DC900327; organism=Citrus sinensis; type=EST; length=510bpback to top |