DC900317
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900317 vs. ExPASy Swiss-Prot
Match: SAR1_CAEEL (GTP-binding protein SAR1 OS=Caenorhabditis elegans GN=ZK180.4 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.088e-34 Identity = 70/156 (44.87%), Postives = 96/156 (61.54%), Query Frame = 2 Query: 2 LHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 469 LHMLKD+R+ QH PT +PTSE++S+G I F +DLGGH ARRVWK ER ES+ +VP L+LGNKID P A SE++L++ L + + TGKG V+ + RP+EVFMCS++++ GYG+G +WL QY+ Sbjct: 38 LHMLKDDRIAQHVPTLHPTSEQMSLGGISFTTYDLGGHAQARRVWKDYFPAVDAVVFLIDVADAERMQESRVELESLLQDEQIASVPVLILGNKIDKPGALSEDQLKWQLNIQHMCTGKGDVSRNEMASRPMEVFMCSVLQRQGYGEGIRWLGQYL 193
BLAST of DC900317 vs. ExPASy Swiss-Prot
Match: SAR1_PICGU (Small COPII coat GTPase SAR1 OS=Pichia guilliermondii GN=SAR1 PE=3 SV=3) HSP 1 Score: 143.665 bits (361), Expect = 1.203e-33 Identity = 79/156 (50.64%), Postives = 94/156 (60.26%), Query Frame = 2 Query: 2 LHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 469 LHMLK++RL QPT +PTSEEL+IG ++F FDLGGHQ ARR+WK ER AESK VPFL+LGNKID A E EL+ LGL N TTGK L + RP+EVFM S+V +MGYG+GFKWLS +I Sbjct: 37 LHMLKNDRLATLQPTLHPTSEELAIGSVRFTTFDLGGHQQARRLWKDYFPEVNGIVFLVDAADTERLAESKAELESLFRIEELSQVPFLILGNKIDKSTAIGEMELKSALGLYN-TTGKDVTKLPEGQ-RPIEVFMVSVVMRMGYGEGFKWLSSFI 190
BLAST of DC900317 vs. ExPASy Swiss-Prot
Match: SAR1_KLULA (Small COPII coat GTPase SAR1 OS=Kluyveromyces lactis GN=SAR1 PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.203e-33 Identity = 80/156 (51.28%), Postives = 93/156 (59.62%), Query Frame = 2 Query: 2 LHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 469 LHMLK++RL QPT +PTSEEL+IG IKF FDLGGH ARR+WK ERF E++ NVPF VLGNKID P A SE ELR LGL N TTG K+ RP+E+FMCS+V K GY + FKWLS+YI Sbjct: 40 LHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGGHLQARRLWKDYFPEVNGIVFLVDAADPERFNEARIELDALFQIKELDNVPFAVLGNKIDSPSAVSETELRAALGLMN-TTGYTKI----EGQRPIELFMCSVVMKSGYSEAFKWLSEYI 190
BLAST of DC900317 vs. ExPASy Swiss-Prot
Match: SAR1_ASHGO (Small COPII coat GTPase SAR1 OS=Ashbya gossypii GN=SAR1 PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.737e-32 Identity = 77/156 (49.36%), Postives = 93/156 (59.62%), Query Frame = 2 Query: 2 LHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 469 LHMLK++RL QPT +PTSEEL+IG IKF FDLGGH ARR+WK ERF E++ VPF++LGNKID P A SE ELR LGL N TTG ++ RP+E+FMCS+V K GY + F+WLSQYI Sbjct: 40 LHMLKNDRLATLQPTWHPTSEELAIGSIKFTTFDLGGHIQARRLWKDYFPEVNGIVFLVDAADSERFNEARVELDALFQIPELKTVPFVILGNKIDAPSAVSETELRAALGLLN-TTGDARI----EGQRPVELFMCSVVMKSGYLEAFQWLSQYI 190
BLAST of DC900317 vs. ExPASy Swiss-Prot
Match: SAR1_YEAST (Small COPII coat GTPase SAR1 OS=Saccharomyces cerevisiae GN=SAR1 PE=1 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.964e-32 Identity = 77/156 (49.36%), Postives = 94/156 (60.26%), Query Frame = 2 Query: 2 LHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 469 LHMLK++RL QPT +PTSEEL+IG IKF FDLGGH ARR+WK ERF E++ +VPF++LGNKID P A SE ELR LGL N TTG ++ RP+EVFMCS+V + GY + F+WLSQYI Sbjct: 40 LHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGGHIQARRLWKDYFPEVNGIVFLVDAADPERFDEARVELDALFNIAELKDVPFVILGNKIDAPNAVSEAELRSALGLLN-TTGSQRI----EGQRPVEVFMCSVVMRNGYLEAFQWLSQYI 190
BLAST of DC900317 vs. ExPASy Swiss-Prot
Match: SAR1_CANGA (Small COPII coat GTPase SAR1 OS=Candida glabrata GN=SAR1 PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.279e-31 Identity = 75/156 (48.08%), Postives = 93/156 (59.62%), Query Frame = 2 Query: 2 LHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 469 LHMLK++RL QPT +PTSEEL+IG IKF FDLGGH ARR+WK +RF E++ +VPF++LGNKID A SE ELR LGL N TTG ++ RP+EVFMCS+V + GY + F+WLSQYI Sbjct: 39 LHMLKNDRLATLQPTWHPTSEELAIGNIKFTTFDLGGHVQARRLWKDYFPEVNGIVFLVDSADPDRFDEARVELDALFNITELKDVPFVILGNKIDAANAVSEAELRSALGLLN-TTGSQRI----EGQRPVEVFMCSVVMRNGYLEAFQWLSQYI 189
BLAST of DC900317 vs. ExPASy Swiss-Prot
Match: SAR1_GIALA (GTP-binding protein Sar1 OS=Giardia lamblia GN=SAR1 PE=3 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.522e-28 Identity = 65/156 (41.67%), Postives = 87/156 (55.77%), Query Frame = 2 Query: 2 LHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKXXXXXXXXXXXXXXXXXKERFAESKKXXXXXXXXXXXXNVPFLVLGNKIDIPYAASEEELRYHLGLSNFTTGKGKVNLADSNVRPLEVFMCSIVRKMGYGDGFKWLSQYI 469 L MLK+ PTQ PTS+EL +G I+FK FDLGGH++AR++W+ RF ES++ P L+L NK+DI A S E + G+ + TGKG NL S+ RPLEVF CS++ + GY DGFKWLS+Y+ Sbjct: 37 LAMLKNSATTTVAPTQQPTSQELVMGSIRFKTFDLGGHEVARQLWEQYVTNSDGIVFLVDSADPSRFEESRRTLQELLDNHDLATTPILILSNKVDIQTAVSMETMVQSFGIQHLLTGKGGSNLR-SDQRPLEVFPCSVINRFGYTDGFKWLSKYL 191 The following BLAST results are available for this feature:
BLAST of DC900317 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 47
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900317 ID=DC900317; Name=DC900317; organism=Citrus sinensis; type=EST; length=817bpback to top |