DC900316
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900316 vs. ExPASy Swiss-Prot
Match: SMUF2_XENLA (E3 ubiquitin-protein ligase SMURF2 OS=Xenopus laevis GN=smurf2 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.217e-23 Identity = 49/92 (53.26%), Postives = 69/92 (75.00%), Query Frame = -1 Query: 324 SPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDWPEYPSKQHLEERLLLAIHE 599 S +++WFW+ V+ F +E +ARLLQFVTG+S+VPL+GF ALQG +G + F IH+ S ++LP AHTCFN++D P Y + + L E+LL AI E Sbjct: 653 SNIVKWFWKAVESFDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLFTIHQIDASTNNLPKAHTCFNRIDIPPYETYEKLYEKLLTAIEE 744
BLAST of DC900316 vs. ExPASy Swiss-Prot
Match: HECW1_MOUSE (E3 ubiquitin-protein ligase HECW1 OS=Mus musculus GN=Hecw1 PE=2 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 2.076e-23 Identity = 54/97 (55.67%), Postives = 67/97 (69.07%), Query Frame = -1 Query: 324 GYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDWPEYPSKQHLEERLLLAIHE 614 GY VI+WFW V+ F+ E + RLLQFVTGTS VP EGF+AL+G +G ++F I K +G I LP AHTCFN+LD P YPS L E+LL A+ E Sbjct: 1502 GYHDGHLVIRWFWAAVERFNNEQRLRLLQFVTGTSSVPYEGFAALRGSNGLRRFCIEK-WGKITSLPRAHTCFNRLDLPPYPSYSMLYEKLLTAVEE 1597
BLAST of DC900316 vs. ExPASy Swiss-Prot
Match: HECW1_HUMAN (E3 ubiquitin-protein ligase HECW1 OS=Homo sapiens GN=HECW1 PE=1 SV=3) HSP 1 Score: 108.997 bits (271), Expect = 2.076e-23 Identity = 54/97 (55.67%), Postives = 67/97 (69.07%), Query Frame = -1 Query: 324 GYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDWPEYPSKQHLEERLLLAIHE 614 GY VI+WFW V+ F+ E + RLLQFVTGTS VP EGF+AL+G +G ++F I K +G I LP AHTCFN+LD P YPS L E+LL A+ E Sbjct: 1504 GYHDGHLVIRWFWAAVERFNNEQRLRLLQFVTGTSSVPYEGFAALRGSNGLRRFCIEK-WGKITSLPRAHTCFNRLDLPPYPSYSMLYEKLLTAVEE 1599
BLAST of DC900316 vs. ExPASy Swiss-Prot
Match: SMUF2_MOUSE (E3 ubiquitin-protein ligase SMURF2 OS=Mus musculus GN=Smurf2 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.541e-23 Identity = 50/92 (54.35%), Postives = 68/92 (73.91%), Query Frame = -1 Query: 324 SPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDWPEYPSKQHLEERLLLAIHE 599 S V++WFW+ V+ F +E +ARLLQFVTG+S+VPL+GF ALQG +G + F IH+ ++LP AHTCFN++D P Y S + L E+LL AI E Sbjct: 650 SNVVKWFWKAVEFFDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLFTIHQIDACTNNLPKAHTCFNRIDIPPYESYEKLYEKLLTAIEE 741
BLAST of DC900316 vs. ExPASy Swiss-Prot
Match: PUB1_SCHPO (E3 ubiquitin-protein ligase pub1 OS=Schizosaccharomyces pombe GN=pub1 PE=1 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 3.541e-23 Identity = 53/102 (51.96%), Postives = 70/102 (68.63%), Query Frame = -1 Query: 306 YSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDWPEYPSKQHLEERLLLAIHEGNEGFG 611 YS +I+WFWE++ +S E K+RLLQF TGTS++P+ GF LQG G +KF I KA G + LP AHTCFN+LD P Y SK+ L+ +L +A+ E GFG Sbjct: 666 YSENDQIIKWFWELMDEWSNEKKSRLLQFTTGTSRIPVNGFKDLQGSDGPRKFTIEKA-GEPNKLPKAHTCFNRLDLPPYTSKKDLDHKLSIAVEE-TIGFG 765
BLAST of DC900316 vs. ExPASy Swiss-Prot
Match: HACE1_MOUSE (E3 ubiquitin-protein ligase HACE1 OS=Mus musculus GN=Hace1 PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 3.541e-23 Identity = 52/103 (50.49%), Postives = 72/103 (69.90%), Query Frame = -1 Query: 309 SGYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDWPEYPSKQHLEERLLLAIHEGNEGF 617 SGY PVIQWFWEVV+ ++E++ LLQFVTG+S+VP GF+ + G SG Q F I + + LP++ TC N L PEYPSK+ L++RLL+A+H G+ G+ Sbjct: 804 SGYEREDPVIQWFWEVVEDITQEERVLLLQFVTGSSRVPHGGFANIMGGSGLQNFTIAAVPYTPNLLPTSSTCINMLKLPEYPSKEILKDRLLVALHCGSYGY 906
BLAST of DC900316 vs. ExPASy Swiss-Prot
Match: HACE1_HUMAN (E3 ubiquitin-protein ligase HACE1 OS=Homo sapiens GN=HACE1 PE=1 SV=2) HSP 1 Score: 108.227 bits (269), Expect = 3.541e-23 Identity = 52/103 (50.49%), Postives = 72/103 (69.90%), Query Frame = -1 Query: 309 SGYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDWPEYPSKQHLEERLLLAIHEGNEGF 617 SGY PVIQWFWEVV+ ++E++ LLQFVTG+S+VP GF+ + G SG Q F I + + LP++ TC N L PEYPSK+ L++RLL+A+H G+ G+ Sbjct: 804 SGYEREDPVIQWFWEVVEDITQEERVLLLQFVTGSSRVPHGGFANIMGGSGLQNFTIAAVPYTPNLLPTSSTCINMLKLPEYPSKEILKDRLLVALHCGSYGY 906
BLAST of DC900316 vs. ExPASy Swiss-Prot
Match: SMUF2_HUMAN (E3 ubiquitin-protein ligase SMURF2 OS=Homo sapiens GN=SMURF2 PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 4.625e-23 Identity = 49/92 (53.26%), Postives = 68/92 (73.91%), Query Frame = -1 Query: 324 SPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDWPEYPSKQHLEERLLLAIHE 599 S +++WFW+ V+ F +E +ARLLQFVTG+S+VPL+GF ALQG +G + F IH+ ++LP AHTCFN++D P Y S + L E+LL AI E Sbjct: 650 SNIVKWFWKAVEFFDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLFTIHQIDACTNNLPKAHTCFNRIDIPPYESYEKLYEKLLTAIEE 741
BLAST of DC900316 vs. ExPASy Swiss-Prot
Match: SMUF2_DANRE (E3 ubiquitin-protein ligase SMURF2 OS=Danio rerio GN=smurf2 PE=2 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.040e-23 Identity = 48/92 (52.17%), Postives = 67/92 (72.83%), Query Frame = -1 Query: 324 SPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDWPEYPSKQHLEERLLLAIHE 599 S +++WFW V+ + +E +ARLLQFVTG+S+VPL+GF ALQG +G + F IH+ S ++LP AHTCFN++D P Y S L ++LL AI E Sbjct: 667 SNIVKWFWRAVESYDEERRARLLQFVTGSSRVPLQGFKALQGAAGPRLFTIHQIDASTNNLPKAHTCFNRIDIPPYESYDKLYDKLLTAIEE 758
BLAST of DC900316 vs. ExPASy Swiss-Prot
Match: PUB2_SCHPO (E3 ubiquitin-protein ligase pub2 OS=Schizosaccharomyces pombe GN=pub2 PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 6.040e-23 Identity = 52/102 (50.98%), Postives = 68/102 (66.67%), Query Frame = -1 Query: 306 YSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDWPEYPSKQHLEERLLLAIHEGNEGFG 611 Y+ ++ WFWE++ +S E KA+LLQF TGTS++PL GF + G G +KF I K G I LP AHTCFN+LD P Y SK+ LE++L +AI E GFG Sbjct: 570 YTETDDIVIWFWELLSEWSPEKKAKLLQFATGTSRLPLSGFKDMHGSDGPRKFTIEKV-GHISQLPKAHTCFNRLDIPPYNSKEELEQKLTIAIQE-TAGFG 669 The following BLAST results are available for this feature:
BLAST of DC900316 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900316 ID=DC900316; Name=DC900316; organism=Citrus sinensis; type=EST; length=632bpback to top |