DC900316
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DC900316 vs. ExPASy Swiss-Prot
Match: WWP1_HUMAN (NEDD4-like E3 ubiquitin-protein ligase WWP1 OS=Homo sapiens GN=WWP1 PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.148e-20 Identity = 53/102 (51.96%), Postives = 66/102 (64.71%), Query Frame = -1 Query: 306 YSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDWPEYPSKQHLEERLLLAIHEGNEGFG 611 Y+ S I WFW+ V+ E + RLLQFVTGT ++PL GF+ L G +G QKF I K G LP +HTCFN+LD P Y S + L+E+LL AI E EGFG Sbjct: 821 YTRNSKQIIWFWQFVKETDNEVRMRLLQFVTGTCRLPLGGFAELMGSNGPQKFCIEKV-GKDTWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEE-TEGFG 920
BLAST of DC900316 vs. ExPASy Swiss-Prot
Match: SUDX_DROME (E3 ubiquitin-protein ligase Su(dx) OS=Drosophila melanogaster GN=Su(dx) PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 5.291e-19 Identity = 50/101 (49.50%), Postives = 63/101 (62.38%), Query Frame = -1 Query: 309 YSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDWPEYPSKQHLEERLLLAIHEGNEGF 611 Y+ S + WFW+ V+ E +ARLLQFVTGT +VP+ GF+ L G +G Q+F I K G LP +HTCFN+LD P Y S L E+L AI E EGF Sbjct: 848 YNRNSKQVVWFWQFVRETDNEKRARLLQFVTGTCRVPVGGFAELMGSNGPQRFCIEKV-GKETWLPRSHTCFNRLDLPPYKSYDQLVEKLTFAIEE-TEGF 946
BLAST of DC900316 vs. ExPASy Swiss-Prot
Match: SMUF1_DROME (E3 ubiquitin-protein ligase Smurf1 OS=Drosophila melanogaster GN=lack PE=1 SV=3) HSP 1 Score: 92.0485 bits (227), Expect = 2.626e-18 Identity = 47/93 (50.54%), Postives = 65/93 (69.89%), Query Frame = -1 Query: 324 IQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGS---QKFQIH-KAYGSIDHLPSAHTCFNQLDWPEYPSKQHLEERLLLAIHE 590 + WFW+VV+ +S E +ARLLQFVTG+S+VPL+GF ALQG +G+ + F IH A +LP AHTCFN++D P Y + Q L ++L A+ E Sbjct: 962 VLWFWQVVESYSSEMRARLLQFVTGSSRVPLQGFRALQGSTGAVGPRLFTIHLTADVPTQNLPKAHTCFNRIDLPPYETYQLLCDKLTQAVEE 1054
BLAST of DC900316 vs. ExPASy Swiss-Prot
Match: K0317_MOUSE (Protein KIAA0317 OS=Mus musculus GN=Kiaa0317 PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 2.458e-16 Identity = 48/96 (50.00%), Postives = 61/96 (63.54%), Query Frame = -1 Query: 306 VIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDWPEYPSKQHLEERLLLAIHEGNEGFG 593 V++WFW VV ++E+ ARLLQF TG+S++P GF+AL FQI A + LP+AHTCFNQL P Y S + + L LAI EG EGFG Sbjct: 732 VMRWFWAVVSSLTQEELARLLQFTTGSSQLPPGGFAAL-----CPSFQIIAA-PTHSTLPTAHTCFNQLCLPTYDSYEEVHRMLQLAISEGCEGFG 821
BLAST of DC900316 vs. ExPASy Swiss-Prot
Match: K0317_HUMAN (Protein KIAA0317 OS=Homo sapiens GN=KIAA0317 PE=2 SV=3) HSP 1 Score: 85.5001 bits (210), Expect = 2.458e-16 Identity = 48/96 (50.00%), Postives = 61/96 (63.54%), Query Frame = -1 Query: 306 VIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDWPEYPSKQHLEERLLLAIHEGNEGFG 593 V++WFW VV ++E+ ARLLQF TG+S++P GF+AL FQI A + LP+AHTCFNQL P Y S + + L LAI EG EGFG Sbjct: 732 VMRWFWTVVSSLTQEELARLLQFTTGSSQLPPGGFAAL-----CPSFQIIAA-PTHSTLPTAHTCFNQLCLPTYDSYEEVHRMLQLAISEGCEGFG 821
BLAST of DC900316 vs. ExPASy Swiss-Prot
Match: HUL4_ASHGO (Probable E3 ubiquitin-protein ligase HUL4 OS=Ashbya gossypii GN=HUL4 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 3.549e-15 Identity = 38/104 (36.54%), Postives = 61/104 (58.65%), Query Frame = -1 Query: 303 GYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDWPEYPSKQHLEERLLLAIHEGNEGFGF 614 G+ SPV+QWFWE++ + +LL FVTG+ +VP G + + F+I + D LP +HTCFN++ EY K+ L +L++A+ E ++G+GF Sbjct: 743 GFDDNSPVVQWFWEILSEMEYPQQRKLLHFVTGSDRVPATGVTTI-------PFRISRIRSGADRLPLSHTCFNEICLHEYKDKETLRNKLIIALEE-SQGYGF 838
BLAST of DC900316 vs. ExPASy Swiss-Prot
Match: HECD2_MOUSE (Probable E3 ubiquitin-protein ligase HECTD2 OS=Mus musculus GN=Hectd2 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.033e-14 Identity = 43/103 (41.75%), Postives = 63/103 (61.17%), Query Frame = -1 Query: 306 GYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDWPEYPSKQHLEERLLLAIHEGNEGFG 614 GY+ I++FW+VV GF E + +LL F TG+ +VP+ G + L F+I K S + LP AHTCFNQL P Y S++ L+++L++ I +EGFG Sbjct: 678 GYAKTDLTIRYFWDVVLGFPLELQKKLLHFTTGSDRVPVGGMADL-------NFKISKNETSTNWLPVAHTCFNQLCLPPYKSRKDLKQKLIIGI-SNSEGFG 772
BLAST of DC900316 vs. ExPASy Swiss-Prot
Match: UBE3A_HUMAN (Ubiquitin-protein ligase E3A OS=Homo sapiens GN=UBE3A PE=1 SV=4) HSP 1 Score: 79.7221 bits (195), Expect = 1.349e-14 Identity = 46/103 (44.66%), Postives = 59/103 (57.28%), Query Frame = -1 Query: 306 GYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDWPEYPSKQHLEERLLLAIHEGNEGFG 614 GY+ S +I+ FWE+V F+ E K LQF TGT + P+ G G K I K + LP++HTCFN L PEY SK+ L+ERLL AI +GFG Sbjct: 779 GYTRDSVLIREFWEIVHSFTDEQKRLFLQFTTGTDRAPVGGL-------GKLKMIIAKNGPDTERLPTSHTCFNVLLLPEYSSKEKLKERLLKAITYA-KGFG 873
BLAST of DC900316 vs. ExPASy Swiss-Prot
Match: HECD2_PONAB (Probable E3 ubiquitin-protein ligase HECTD2 OS=Pongo abelii GN=HECTD2 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.349e-14 Identity = 43/103 (41.75%), Postives = 63/103 (61.17%), Query Frame = -1 Query: 306 GYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDWPEYPSKQHLEERLLLAIHEGNEGFG 614 GY+ I++FW+VV GF + + +LL F TG+ +VP+ G + L F+I K S + LP AHTCFNQL P Y SK+ L+++L++ I +EGFG Sbjct: 680 GYAKTDLTIKYFWDVVLGFPLDLQKKLLHFTTGSDRVPVGGMADLN-------FKISKNETSTNCLPVAHTCFNQLCLPPYKSKKDLKQKLIIGI-SNSEGFG 774
BLAST of DC900316 vs. ExPASy Swiss-Prot
Match: HECD2_HUMAN (Probable E3 ubiquitin-protein ligase HECTD2 OS=Homo sapiens GN=HECTD2 PE=2 SV=2) HSP 1 Score: 79.7221 bits (195), Expect = 1.349e-14 Identity = 43/103 (41.75%), Postives = 63/103 (61.17%), Query Frame = -1 Query: 306 GYSAASPVIQWFWEVVQGFSKEDKARLLQFVTGTSKVPLEGFSALQGISGSQKFQIHKAYGSIDHLPSAHTCFNQLDWPEYPSKQHLEERLLLAIHEGNEGFG 614 GY+ I++FW+VV GF + + +LL F TG+ +VP+ G + L F+I K S + LP AHTCFNQL P Y SK+ L+++L++ I +EGFG Sbjct: 680 GYAKTDLTIKYFWDVVLGFPLDLQKKLLHFTTGSDRVPVGGMADLN-------FKISKNETSTNCLPVAHTCFNQLCLPPYKSKKDLKQKLIIGI-SNSEGFG 774 The following BLAST results are available for this feature:
BLAST of DC900316 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 65
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Sequences
The
following sequences are available for this feature:
EST sequence >DC900316 ID=DC900316; Name=DC900316; organism=Citrus sinensis; type=EST; length=632bpback to top |