CX043655
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043655 vs. ExPASy Swiss-Prot
Match: H2A_ASPFU (Histone H2A OS=Aspergillus fumigatus GN=hta1 PE=3 SV=3) HSP 1 Score: 140.584 bits (353), Expect = 7.458e-33 Identity = 74/123 (60.16%), Postives = 83/123 (67.48%), Query Frame = 2 Query: 44 GSTKGGRGKPKSTKSISRSHKAGLQFPVGRIARFLKAGKYADRVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPRKMGK 412 G GG+ S + SRS KAGL FPVGR+ R L+ G YA RVGAGAP GNAARDNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQNLLP+K K Sbjct: 3 GGKSGGKASG-SKNAQSRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTPK 124
BLAST of CX043655 vs. ExPASy Swiss-Prot
Match: H2A_ASPCL (Histone H2A OS=Aspergillus clavatus GN=hta1 PE=3 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 7.458e-33 Identity = 74/123 (60.16%), Postives = 83/123 (67.48%), Query Frame = 2 Query: 44 GSTKGGRGKPKSTKSISRSHKAGLQFPVGRIARFLKAGKYADRVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPRKMGK 412 G GG+ S + SRS KAGL FPVGR+ R L+ G YA RVGAGAP GNAARDNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNIHQNLLP+K K Sbjct: 3 GGKSGGKASG-SKNAQSRSSKAGLAFPVGRVHRLLRKGNYAQRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGHVTIAQGGVLPNIHQNLLPKKTPK 124
BLAST of CX043655 vs. ExPASy Swiss-Prot
Match: H2A1_TETPY (Histone H2A.1 OS=Tetrahymena pyriformis GN=HTA2 PE=1 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 7.458e-33 Identity = 72/130 (55.38%), Postives = 88/130 (67.69%), Query Frame = 2 Query: 32 MSSAGSTKGGRGKPKSTKSISRSHKAGLQFPVGRIARFLKAGKYADRVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPRKMGKGRE 421 MS+ G +GK S+K +SRS +AGLQFPVGRI+RFLK G+Y++R+G GAP GNAA+DNKK RIVPRHI LA+RNDEEL+KL+ TIA+GGVLPNI+ LLP K K E Sbjct: 1 MSTTGKGGKAKGKTASSKQVSRSARAGLQFPVGRISRFLKNGRYSERIGTGAPVYLAAVLEYLAAEVLELAGNAAKDNKKTRIVPRHILLAIRNDEELNKLMANTTIADGGVLPNINPMLLPSKTKKTSE 130
BLAST of CX043655 vs. ExPASy Swiss-Prot
Match: H2A7_ARATH (Probable histone H2A.7 OS=Arabidopsis thaliana GN=At5g59870 PE=1 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 9.741e-33 Identity = 78/130 (60.00%), Postives = 89/130 (68.46%), Query Frame = 2 Query: 32 MSSAGSTK---GGR---GKPKSTKSISRSHKAGLQFPVGRIARFLKAGKYADRVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPRK 403 M S G K GGR G PK TKS+S+S KAGLQFPVGRI RFLK G+YA R+G GAP GNAARDNKK+RI+PRH+ LA+RNDEEL KLL VTIA+GGVLPNI+ LLP+K Sbjct: 1 MESTGKVKKAFGGRKPPGAPK-TKSVSKSMKAGLQFPVGRITRFLKKGRYAQRLGGGAPVYMAAVLEYLAAEVLELAGNAARDNKKSRIIPRHLLLAIRNDEELGKLLSGVTIAHGGVLPNINSVLLPKK 129
BLAST of CX043655 vs. ExPASy Swiss-Prot
Match: H2A1_MEDTR (Probable histone H2A.1 OS=Medicago truncatula GN=MtrDRAFT_AC149210g1v1 PE=3 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 9.741e-33 Identity = 77/139 (55.40%), Postives = 90/139 (64.75%), Query Frame = 2 Query: 26 QSMSSAGSTKGGRGKPKSTKSISRSHKAGLQFPVGRIARFLKAGKYADRVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPRKMGKGREDIGSASQ 442 ++ AG KGG K KS++RS +AGLQFPVGRI R+LK G+YA RVG GAP GNAARDNKKNRI+PRH+ LAVRNDEEL KLL VTIA+GGVLPNI+ LLP+K K S S+ Sbjct: 6 KTKKGAGGRKGGPRK----KSVTRSTRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAVRNDEELGKLLAGVTIAHGGVLPNINPILLPKKNEKAATTTKSPSK 140
BLAST of CX043655 vs. ExPASy Swiss-Prot
Match: H2A_CRYNE (Histone H2A OS=Cryptococcus neoformans GN=HTA1 PE=3 SV=3) HSP 1 Score: 139.428 bits (350), Expect = 1.662e-32 Identity = 80/133 (60.15%), Postives = 91/133 (68.42%), Query Frame = 2 Query: 50 TKGGRGKPKS-TKSISRSHKAGLQFPVGRIARFLKAGKYADRVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPRKMGKGREDIGSASQE 445 + GG+GK S TKS SRS KAGLQFPVGRI R LK G YA R+G+GAP GNAARDNKK+RIVPRH+QLAVRNDEEL+KLLG+V I+ GGVLP+I LLP K KG+ ASQE Sbjct: 2 SSGGKGKASSETKSSSRSSKAGLQFPVGRIHRLLKKGNYAQRIGSGAPVYLAAVLEYLAAEILELAGNAARDNKKSRIVPRHLQLAVRNDEELNKLLGSVVISQGGVLPHIMAELLPVKT-KGK---AKASQE 130
BLAST of CX043655 vs. ExPASy Swiss-Prot
Match: H2A4_PSAMI (Late histone H2A.2.2 OS=Psammechinus miliaris PE=3 SV=2) HSP 1 Score: 139.428 bits (350), Expect = 1.662e-32 Identity = 71/115 (61.74%), Postives = 83/115 (72.17%), Query Frame = 2 Query: 59 GRGKPKSTKSISRSHKAGLQFPVGRIARFLKAGKYADRVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPRK 403 G+G +K+ SRS +AGLQFPVGR+ RFL+ G YA+RVGAGAP GNAARDNKK+RI+PRH+QLAVRNDEEL+KLLG VTIA GGVLPNI LLP+K Sbjct: 5 GKGAKSKSKAKSRSSRAGLQFPVGRVHRFLRKGNYANRVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKSRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKK 119
BLAST of CX043655 vs. ExPASy Swiss-Prot
Match: H2A_PARAN (Histone H2A, gonadal OS=Parechinus angulosus PE=1 SV=2) HSP 1 Score: 139.043 bits (349), Expect = 2.170e-32 Identity = 71/117 (60.68%), Postives = 82/117 (70.09%), Query Frame = 2 Query: 59 GRGKPKSTKSISRSHKAGLQFPVGRIARFLKAGKYADRVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPRKMG 409 G+G K+ SRS +AGLQFPVGR+ RFL+ G YA+RVGAGAP GNAARDNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNI LLP+K G Sbjct: 5 GKGAKAKGKAKSRSSRAGLQFPVGRVHRFLRKGNYANRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTG 121
BLAST of CX043655 vs. ExPASy Swiss-Prot
Match: H2AX_DANRE (Histone H2A.x OS=Danio rerio GN=h2afx PE=2 SV=3) HSP 1 Score: 139.043 bits (349), Expect = 2.170e-32 Identity = 75/138 (54.35%), Postives = 91/138 (65.94%), Query Frame = 2 Query: 32 MSSAGSTKGGRGKPKSTKSISRSHKAGLQFPVGRIARFLKAGKYADRVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPRKMGKGREDIGSASQE 445 MS G T GG+ + K+ +RS +AGLQFPVGR+ R L+ G YA+RVGAGAP GNAARDNKK RI+PRH+QLAVRNDEEL+KLLG VTIA GGVLPNI LLP+K G+ G + ++ Sbjct: 1 MSGRGKT-GGKARAKAK---TRSSRAGLQFPVGRVHRLLRKGNYAERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTGQAAASSGKSGKK 134
BLAST of CX043655 vs. ExPASy Swiss-Prot
Match: H2A3_PSAMI (Late histone H2A.3, gonadal OS=Psammechinus miliaris PE=1 SV=2) HSP 1 Score: 139.043 bits (349), Expect = 2.170e-32 Identity = 71/117 (60.68%), Postives = 82/117 (70.09%), Query Frame = 2 Query: 59 GRGKPKSTKSISRSHKAGLQFPVGRIARFLKAGKYADRVGAGAPXXXXXXXXXXXXXXXXXXGNAARDNKKNRIVPRHIQLAVRNDEELSKLLGTVTIANGGVLPNIHQNLLPRKMG 409 G+G K+ SRS +AGLQFPVGR+ RFL+ G YA+RVGAGAP GNAARDNKK RI+PRH+QLA+RNDEEL+KLLG VTIA GGVLPNI LLP+K G Sbjct: 5 GKGAKAKGKAKSRSSRAGLQFPVGRVHRFLRKGNYANRVGAGAPVYLAAVLEYLAAEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAVLLPKKTG 121 The following BLAST results are available for this feature:
BLAST of CX043655 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX043655 ID=CX043655; Name=CX043655; organism=Citrus sinensis; type=EST; length=682bpback to top |