CX043605
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM1_MARAV (Glutamyl-tRNA reductase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=hemA PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 5.210e-11 Identity = 46/139 (33.09%), Postives = 72/139 (51.80%), Query Frame = -2 Query: 415 VYNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLETDTSLFEQKV 831 +Y VDDL++V+ N R A EA+ +IS + F +L+ V T+K R AE +R E +K L + + +T A+ L+RG+ NKLLH P +R ++ RT E E + L ++ LE D +K+ Sbjct: 295 LYTVDDLRQVIEENIRSREGAAREAENLISSGVQDFLDQLRALDAVSTLKVFRQRAELLRDVETEKALRALRNGTDPET--ALRSLARGLTNKLLHQPSVQVRKAMAEGRT--EVTECLRELYQLDALEADEPTTTEKL 429
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM1_NITMU (Glutamyl-tRNA reductase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=hemA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.805e-11 Identity = 42/112 (37.50%), Postives = 58/112 (51.79%), Query Frame = -2 Query: 502 VYNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELD--KCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSR 831 +Y+VDDL ++V + R +A+AII F W +S + VPTI+ LR AER R EL+ K L G+D R+ ++ LS G+ NK LH P L D R Sbjct: 296 LYSVDDLADIVKEGLDSRQGAVAQAEAIIDSNVVNFMHWLESRQVVPTIRALRDQAERYRRHELERAKKLLAKGED----PRKIIESLSNGLTNKFLHLPSYALNHAAEDER 403
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM1_DESMR (Glutamyl-tRNA reductase OS=Desulfovibrio magneticus (strain ATCC 700980 / DSM 13731 / RS-1) GN=hemA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.805e-11 Identity = 35/103 (33.98%), Postives = 59/103 (57.28%), Query Frame = -2 Query: 523 VYNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLR 831 +Y++DDL+EVV N R +A A+ II + ++F W SL+ PTI L + EL K L ++G ++ ++TR A++ ++ I K+LH P+ L+ Sbjct: 298 LYDIDDLQEVVEENLAQRREEAARARDIIGLQVERFGEWVKSLDVKPTIVDLLDVGASLARQELQKTLRRLGPEVPEETRAALETMALSISRKMLHEPIAFLK 400
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM1_ALISL (Glutamyl-tRNA reductase OS=Aliivibrio salmonicida (strain LFI1238) GN=hemA PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 6.805e-11 Identity = 35/98 (35.71%), Postives = 58/98 (59.18%), Query Frame = -2 Query: 538 VYNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGP 831 +Y+VDDLK ++ N E R +A++A+AI+SEES F W S + V +I++ R +E IR+ L K + + + + + +LS + NKL+H P Sbjct: 296 LYSVDDLKSIIDHNIEQRKIEAIQAEAIVSEESAGFMTWIRSRQAVNSIRQYRENSESIRIELLQKSIQALAS--GQNAEKVLAELSNKLTNKLIHAP 391
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM1_ROSS1 (Glutamyl-tRNA reductase OS=Roseiflexus sp. (strain RS-1) GN=hemA PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.887e-11 Identity = 50/141 (35.46%), Postives = 77/141 (54.61%), Query Frame = -2 Query: 427 KLHGVY--NVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLETDTSLF 843 ++ GVY +VD L+ + N+ R +A A+ II E +F W + VPTI+ LR AE IR AE+ + L++ ++S + R V LS I+NKLLH P+ LR D E L A+ R+F ++ DT+++ Sbjct: 288 EIPGVYLHDVDALEPICRTNRALRAAEAERAETIIEGEVAKFMEWWAVQQAVPTIRALRKRAEDIRDAEIRRALARC-PELSPQQRETVIALSTAIINKLLHEPIVALR----DPEASGELLT---AVRRLFNID-DTAVY 419 The following BLAST results are available for this feature:
BLAST of CX043605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 105
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043605 ID=CX043605; Name=CX043605; organism=Citrus sinensis; type=EST; length=850bpback to top |