CX043605
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM1_PROMA (Glutamyl-tRNA reductase OS=Prochlorococcus marinus GN=hemA PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.543e-23 Identity = 60/130 (46.15%), Postives = 86/130 (66.15%), Query Frame = -2 Query: 439 YNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLETD 828 Y+VDDL+EVVA N++ R + A+EAQ +I EE++ F W SLE VPTI +LR+ E IR EL K LS+MG D S + R+ V+ LS+GI+NK+LH P+ +LR S+ E+L+ + +L + E D Sbjct: 308 YDVDDLQEVVARNQDARQQIAIEAQNLIDEEARVFLEWWASLEAVPTINRLRSNLESIRKEELQKALSRMGPDFSARERKVVEALSKGIINKILHTPVTNLRAPQPSSQR-KESLKIVESLFELGVSEND 436
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM1_PROM3 (Glutamyl-tRNA reductase OS=Prochlorococcus marinus (strain MIT 9303) GN=hemA PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.543e-23 Identity = 53/102 (51.96%), Postives = 72/102 (70.59%), Query Frame = -2 Query: 523 YNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLR 828 ++VDDL EVV+ N+E R + A EA+ ++ EE++ F W DSLE VPTI +LRA E IR EL K LS+MG D S + R+ V+ LS+GI+NK+LH P+ LR Sbjct: 307 HDVDDLHEVVSRNQEARQQMAKEAEVVLQEETRLFLEWWDSLEAVPTINRLRATLEAIRAEELQKALSRMGPDFSARERKVVEALSKGIINKILHTPVTQLR 408
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM1_SYNS3 (Glutamyl-tRNA reductase OS=Synechococcus sp. (strain CC9311) GN=hemA PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.934e-23 Identity = 57/129 (44.19%), Postives = 83/129 (64.34%), Query Frame = -2 Query: 442 YNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLET 828 ++VDDL+EVV N+E R + A EA+ ++ EE + F W DSLE VPTI +LRA E IRV EL K LS+MG D S + R+ V+ L++G++NK+LH P+ LR S E + + + ++F LE+ Sbjct: 307 HDVDDLQEVVERNQEARQQVAREAEGLLLEEGRLFLEWWDSLEAVPTINRLRASLEEIRVEELTKALSRMGPDFSARERKVVEALTKGMINKILHTPVTQLRSPQQRS----ERQQALQVVEKIFDLES 431
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM1_CYAP7 (Glutamyl-tRNA reductase OS=Cyanothece sp. (strain PCC 7424) GN=hemA PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 7.749e-23 Identity = 57/130 (43.85%), Postives = 82/130 (63.08%), Query Frame = -2 Query: 439 YNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLETD 828 YNVDDLK VVAAN+E R R A EA+ ++ EE + F W SL+TVPTI LR E IR EL+K LS++G + ++K + ++ L+RGIVNK+LH PM LR + ++ + +L +F L+ + Sbjct: 299 YNVDDLKAVVAANQESRRRLAQEAEGLLEEEVESFELWWRSLDTVPTISCLRDKVETIREQELEKALSRLGTEFAEKHQEVIEALTRGIVNKILHEPMVQLRA----QQDIEARKRCLQSLQMLFDLDIE 424
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM1_SYNY3 (Glutamyl-tRNA reductase OS=Synechocystis sp. (strain PCC 6803) GN=hemA PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.012e-22 Identity = 56/130 (43.08%), Postives = 83/130 (63.85%), Query Frame = -2 Query: 439 YNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLETD 828 +NVDDLKEVVA N+ R + A +A+A++ EE F W SLETVPTI LR+ E IR EL+K LS++G + ++K + ++ L+RGIVNK+LH PM LR + ++ + + +L +F LE + Sbjct: 298 FNVDDLKEVVAQNQASRRQMARQAEALLEEEIAAFDLWWRSLETVPTISSLRSKVEDIREQELEKALSRLGSEFAEKHQEVIEALTRGIVNKILHEPMVQLRA----QQDIEARKQCLRSLKMLFDLEVE 423
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM1_PROM4 (Glutamyl-tRNA reductase OS=Prochlorococcus marinus (strain MIT 9211) GN=hemA PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 1.012e-22 Identity = 59/135 (43.70%), Postives = 83/135 (61.48%), Query Frame = -2 Query: 424 YNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLETDTSLFE 828 ++VDDL+EVV+ N+E R + A+EA+A++ EE + F W SLE VPTI LR+ E +R EL K LS+MG D S + R+ V+ LS+GI+NK+LH P+ +LR + S NR LE +LFE Sbjct: 307 HDVDDLQEVVSRNQEARQQIALEAEALVDEEGRIFLEWWASLEAVPTINLLRSSLESVRKEELQKALSRMGPDFSARERKVVEALSKGIINKILHTPVTNLRAPQTSS-------------NRKISLEVIETLFE 428
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM1_CYAP8 (Glutamyl-tRNA reductase OS=Cyanothece sp. (strain PCC 8801) GN=hemA PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.945e-22 Identity = 57/130 (43.85%), Postives = 80/130 (61.54%), Query Frame = -2 Query: 439 YNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLETD 828 YNVDDLK VVA N E R + A EA+ ++ EE + F W SLETVPTI LR E IR EL+K LS++G + ++K + ++ L+RGIVNK+LH PM LR + ++ + +L +F LE + Sbjct: 299 YNVDDLKAVVAQNYESRRQMAQEAEGLLEEEVEAFDLWWRSLETVPTISCLRTKVETIREQELEKALSRLGTEFAEKHQEVIEALTRGIVNKILHEPMVQLRA----QQDIEARKRCLESLKMLFDLEIE 424
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM1_CYAA5 (Glutamyl-tRNA reductase OS=Cyanothece sp. (strain ATCC 51142) GN=hemA PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.945e-22 Identity = 57/136 (41.91%), Postives = 83/136 (61.03%), Query Frame = -2 Query: 439 LKLHGVYNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLETD 846 L++ YNVDDLK VVA N R + A+EA+ ++ EE + F W SLETVPTI LR E IR EL+K LS++G + ++K + ++ L+RGIVNK+LH PM LR + ++ + +L +F LE + Sbjct: 293 LEIVEAYNVDDLKAVVAQNHASRRQMALEAEGLLEEEVEAFELWWRSLETVPTISCLRTKVESIREQELEKALSRLGTEFAEKHQEVIEALTRGIVNKILHEPMVQLRA----QQDIEARQRCLQSLQMLFDLEIE 424
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM1_SYNP6 (Glutamyl-tRNA reductase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=hemA PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.846e-22 Identity = 59/133 (44.36%), Postives = 80/133 (60.15%), Query Frame = -2 Query: 430 YNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLETDTSL 828 YNVDDL+EVVA N+E R + A EA+A++ EE F W SL+TVPTI LR E IR EL+K LS++G + K + V+ L+RGIVNK+LH PM LR + ++ + AL +F L+ L Sbjct: 308 YNVDDLREVVAQNQESRRKLAEEAEALLEEEVDAFDNWWQSLDTVPTINCLRDKIEMIREQELEKALSRLGTEFGDKHQAVVEALTRGIVNKILHDPMVQLR----SQQDIEARRRAVDALQMLFNLDPQGQL 436
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM1_SYNE7 (Glutamyl-tRNA reductase OS=Synechococcus elongatus (strain PCC 7942) GN=hemA PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 3.846e-22 Identity = 59/133 (44.36%), Postives = 80/133 (60.15%), Query Frame = -2 Query: 430 YNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLETDTSL 828 YNVDDL+EVVA N+E R + A EA+A++ EE F W SL+TVPTI LR E IR EL+K LS++G + K + V+ L+RGIVNK+LH PM LR + ++ + AL +F L+ L Sbjct: 308 YNVDDLREVVAQNQESRRKLAEEAEALLEEEVDAFDNWWQSLDTVPTINCLRDKIEMIREQELEKALSRLGTEFGDKHQAVVEALTRGIVNKILHDPMVQLR----SQQDIEARRRAVDALQMLFNLDPQGQL 436 The following BLAST results are available for this feature:
BLAST of CX043605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 105
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043605 ID=CX043605; Name=CX043605; organism=Citrus sinensis; type=EST; length=850bpback to top |