CX043605
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM1_SYNJB (Glutamyl-tRNA reductase OS=Synechococcus sp. GN=hemA PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.568e-22 Identity = 58/135 (42.96%), Postives = 79/135 (58.52%), Query Frame = -2 Query: 445 KLHGV--YNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLE 843 KL GV +NVD L +V N+ R + A+ A+A++ EE QF W SLETVPTI LR E IR E++K LS++G D ++K +D L+RGIVNK+LH PM LR R ++ M L +F L+ Sbjct: 291 KLKGVQVFNVDHLSRIVEENRAQRQKLALAAEALVEEEVDQFMEWWRSLETVPTISSLRHKVESIREQEMEKALSRLGKDFAEKHLEVIDALTRGIVNKILHDPMVQLRA----KRDIEARRAAMRILQELFNLD 421
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM1_SYNJA (Glutamyl-tRNA reductase OS=Synechococcus sp. (strain JA-3-3Ab) GN=hemA PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 8.568e-22 Identity = 57/135 (42.22%), Postives = 80/135 (59.26%), Query Frame = -2 Query: 445 KLHGV--YNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLE 843 KL GV +NVD L +V N+ R + A+ A+A++ EE +QF W SLETVPTI LR E IR E++K LS++G D ++K ++ L+RGIVNK+LH PM LR R ++ M L +F L+ Sbjct: 291 KLRGVQVFNVDHLSRIVEENRAQRQKLALAAEALVEEEVEQFMEWWRSLETVPTISSLRHKVESIREQEMEKALSRLGKDFAEKHLEVIEALTRGIVNKILHDPMVQLRA----QRDIEARRRAMQILQELFNLD 421
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM1_MICAN (Glutamyl-tRNA reductase OS=Microcystis aeruginosa (strain NIES-843) GN=hemA PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.461e-21 Identity = 51/102 (50.00%), Postives = 73/102 (71.57%), Query Frame = -2 Query: 523 YNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLR 828 +NVDDLK VVAAN+E R + A EA+A++ +E + F W SL+TVPTI LR+ E IR EL+K LS++G + ++K + ++ ++RGIVNK+LH PM LR Sbjct: 299 FNVDDLKAVVAANQESRRQMAREAEALLEQEVEAFELWWRSLDTVPTISCLRSKIEDIREQELEKALSRLGTEFAEKHQEVIEAMTRGIVNKILHEPMVQLR 400
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM1_SYNR3 (Glutamyl-tRNA reductase OS=Synechococcus sp. (strain RCC307) GN=hemA PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.252e-21 Identity = 53/130 (40.77%), Postives = 80/130 (61.54%), Query Frame = -2 Query: 439 YNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLETD 828 Y+VDDL+EVV N R + A +A+ ++ E+ + F W D LE VPTI ++R E IR EL K LS+MG D S++ ++ V+ L++G++NK+LHGP LR + + L++M A R+F L D Sbjct: 307 YDVDDLQEVVERNVAARQQLAQQAEVLLDEDRQAFLDWWDGLEAVPTINRMRQQFEEIRKQELLKALSRMGSDFSQREKQVVEALTKGLINKILHGPTTALRA----PQPRQQRLDSMAAAQRLFDLPGD 432
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM1_ANAVT (Glutamyl-tRNA reductase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=hemA PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 7.253e-21 Identity = 55/128 (42.97%), Postives = 76/128 (59.38%), Query Frame = -2 Query: 445 YNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLE 828 +NVDDLK VVA N E R + A EA+ ++ EE + F W SLETV TI LR+ E IR EL+K LS++G + K + ++ L+RGIVNK+LH PM LR + ++ M L +F L+ Sbjct: 299 FNVDDLKAVVAQNYESRRKMAQEAERLLEEEIEAFDIWWRSLETVSTISSLRSKIETIREQELEKALSRLGSEFGDKHQEVIEALTRGIVNKILHDPMVQLRA----QQDVEARRRCMQTLQMLFNLD 422
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM1_ANASP (Glutamyl-tRNA reductase OS=Anabaena sp. (strain PCC 7120) GN=hemA PE=3 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 7.253e-21 Identity = 55/128 (42.97%), Postives = 76/128 (59.38%), Query Frame = -2 Query: 445 YNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLE 828 +NVDDLK VVA N E R + A EA+ ++ EE + F W SLETV TI LR+ E IR EL+K LS++G + K + ++ L+RGIVNK+LH PM LR + ++ M L +F L+ Sbjct: 299 FNVDDLKAVVAQNYESRRKMAQEAERLLEEEIEAFDIWWRSLETVSTISSLRSKIETIREQELEKALSRLGSEFGDKHQEVIEALTRGIVNKILHDPMVQLRA----QQDVEARRRCMQTLQMLFNLD 422
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM1_PROMP (Glutamyl-tRNA reductase OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=hemA PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 9.473e-21 Identity = 54/130 (41.54%), Postives = 82/130 (63.08%), Query Frame = -2 Query: 439 YNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLETD 828 ++VDDL+EVV+ N+E R + A EA++++ +E F W SLE VP I KLR+ E IR EL K LS+MG D S + R+ V+ L++GI+NK+LH P+ LR ++ DE ++ + ++F L D Sbjct: 307 FDVDDLEEVVSRNQEFRQKIAKEAESLVKDERIIFLEWWASLEAVPVINKLRSDLELIRKEELQKALSRMGPDFSARERKVVEALTKGIINKILHTPVTKLR----SPQSRDERQASLKIVEKLFSLVDD 432
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM1_PROM5 (Glutamyl-tRNA reductase OS=Prochlorococcus marinus (strain MIT 9515) GN=hemA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.237e-20 Identity = 54/130 (41.54%), Postives = 82/130 (63.08%), Query Frame = -2 Query: 439 YNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLETD 828 ++VDDL+EVV+ N+E R + A EA++++ EE F W SLE VP I KLR+ E IR EL K LS+MG D S + R+ V+ L++GI+NK+LH P+ LR ++ +E ++ + ++F L D Sbjct: 307 FDVDDLEEVVSRNQEFRQKIAKEAESLVKEERIIFLEWWASLEAVPVINKLRSDLELIRKEELQKALSRMGPDFSARERKVVEALTKGIINKILHTPVTKLR----SPQSREERQASLKIVEKLFSLMDD 432
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM1_NOSP7 (Glutamyl-tRNA reductase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=hemA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.237e-20 Identity = 55/130 (42.31%), Postives = 78/130 (60.00%), Query Frame = -2 Query: 439 YNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLETD 828 +NVDDLK VVA N E R + A EA+ ++ EE + F W SLETV TI LR E IR EL+K LS++G + ++K + ++ L+RGIVNK+LH PM LR + ++ M L +F L+ + Sbjct: 299 FNVDDLKAVVAQNYESRRKIAQEAEKLLEEEVEAFDIWWRSLETVTTISCLRNKVETIREQELEKALSRLGSEFAEKHQEVIEALTRGIVNKILHDPMVQLR----SQQDVEARRRCMQTLQMLFNLDAE 424
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM1_CYAPA (Glutamyl-tRNA reductase OS=Cyanophora paradoxa GN=hemA PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.237e-20 Identity = 54/130 (41.54%), Postives = 79/130 (60.77%), Query Frame = -2 Query: 442 VYNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLET 831 V+NVDDLK VV+ N++ R + A A+ ++ EE F W SLE +PTI KLR AE IRV EL+K +S++G++ + V+ L+RGIVNK+LH PM LR + ++ + L +F L+T Sbjct: 298 VFNVDDLKVVVSQNQQTRRKMAKAAEILLEEELSAFNIWWGSLEAIPTINKLREKAEIIRVKELEKAISRLGNEFVSDHQEIVESLTRGIVNKILHDPMVQLRA----QQDIEIRGRALKILQTLFNLDT 423 The following BLAST results are available for this feature:
BLAST of CX043605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 105
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043605 ID=CX043605; Name=CX043605; organism=Citrus sinensis; type=EST; length=850bpback to top |