CX043605
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM1_PELCD (Glutamyl-tRNA reductase OS=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) GN=hemA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.730e-14 Identity = 51/132 (38.64%), Postives = 74/132 (56.06%), Query Frame = -2 Query: 436 VYNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLETDT 831 +Y++DDL V+ N +R + A +A+ II +E +F +W SLE P I LR E IR E +K L + + RRAV+ L+R IVNK+LH P+ L+ G D T + LE A+ R+F L D+ Sbjct: 297 LYDIDDLNGVIETNLRERRKAAKKAEDIIEQEIVRFYSWLRSLEATPMIVALRRQVEDIRRTETEKTLGSL-QHLDAGDRRAVEALTRAIVNKVLHSPLSVLKRAGDDI-TGEIYLE---AVRRLFDLNPDS 423
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM1_GEOSM (Glutamyl-tRNA reductase OS=Geobacter sp. (strain M21) GN=hemA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.730e-14 Identity = 53/130 (40.77%), Postives = 70/130 (53.85%), Query Frame = -2 Query: 445 VYNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHL-RCDGSDSRTLDETLENMHALNRMFGLE 831 +Y VDDL VVA N E R +A +A+AI+ +E QF W SLE PTI LR + + IR AEL K +S D+ + +D L+ I+NKLLH P L R D + L + AL +F LE Sbjct: 297 LYTVDDLNGVVATNLEQRKVEAAKAEAIVEQEIGQFFKWLSSLEVTPTIVALRTHFDEIRKAELSKTVSGW-KDLPPGAEKKLDALTNAIMNKLLHQPTSVLKRTDQGNRNDL-----YVDALRNLFDLE 420
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM1_DESAD (Glutamyl-tRNA reductase OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=hemA PE=3 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.730e-14 Identity = 46/132 (34.85%), Postives = 75/132 (56.82%), Query Frame = -2 Query: 436 VYNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLETDT 831 +Y++DDLK+VV NK R +A++A +I+ E+ F W +SL+ PTI L +E + EL K L ++G D+ KT +A++ ++ I KLLH P+ L+ + DE ++ RMF L+ +T Sbjct: 295 LYDIDDLKDVVEENKSQREDEAIKANSIVEFETLSFGNWINSLDLQPTIVDLFNRSENVAQQELAKTLKRLG-DVDAKTHKALETMAMSIGKKLLHEPVAFLKRRTEEEGKADEFVD---LARRMFNLDNET 422
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM12_ACIBL (Glutamyl-tRNA reductase 2 OS=Acidobacteria bacterium (strain Ellin345) GN=hemA2 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 2.260e-14 Identity = 45/132 (34.09%), Postives = 82/132 (62.12%), Query Frame = -2 Query: 442 VYNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGS--DSRTLDETLENMHALNRMFGLET 831 VY++DDL++VV ++ DR +A A+AI++ E ++F +L+ VPTI L+ + E +R AE+D+ ++G ++S + AVD L++GI+NK++H P+ L+ +S T+ E ++ + L+ ET Sbjct: 294 VYDIDDLQQVVHSHISDRKDEAAHAEAIVNAEVEKFEERLRTLDVVPTIVSLQEHLETVRQAEIDRLRGRLG-ELSPEQEMAVDALTKGIINKIMHTPITTLKTAAKEPESTTVIELVKRIFNLHEKAKDET 424
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM1_NATTJ (Glutamyl-tRNA reductase OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=hemA PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.952e-14 Identity = 47/131 (35.88%), Postives = 76/131 (58.02%), Query Frame = -2 Query: 439 VYNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLETD 831 +Y +DDL+ VV +N ++R +A A+ IISEE +F W + + VP I LR AE +R EL+K K+ ++S K + AVD L++ IVNK+L P+ ++ + D++ M L ++F LE + Sbjct: 299 LYTIDDLEAVVESNMQERQEEARNAELIISEEVAEFMVWYKTRDVVPLISALREKAEDVRKMELEKYHKKL-KNLSPKEQEAVDKLTKSIVNKILKEPVLRIK----EFAVEDKSELYMATLAQLFDLEDE 424
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM1_GEOSF (Glutamyl-tRNA reductase OS=Geobacter sp. (strain FRC-32) GN=hemA PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 3.855e-14 Identity = 51/131 (38.93%), Postives = 73/131 (55.73%), Query Frame = -2 Query: 442 VYNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHL-RCDGSDSRTLDETLENMHALNRMFGLET 831 +Y VDDL VVA N E R +++ +A+AI+ +E QF W SLE PTI LR+ + IR AEL K ++ D+ + + ++ L+ I+NKLLH P L R D + L + AL +F LET Sbjct: 297 LYTVDDLNGVVATNLEQRKKESEKAEAIVEQEIGQFFKWLSSLEVTPTIVALRSKFDEIRRAELAKTMANW-KDLPPEGEKRLEALTNAIMNKLLHQPTSVLKRSDQGNRNDL-----YVDALRNLFDLET 421
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM1_MYXXD (Glutamyl-tRNA reductase OS=Myxococcus xanthus (strain DK 1622) GN=hemA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.122e-13 Identity = 38/107 (35.51%), Postives = 65/107 (60.75%), Query Frame = -2 Query: 508 YNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSD 828 Y+VDD+++ VA N R +A +A ++++E +F R E P + +LR AE I +E+++ L +GD +++K R++++ + R IVNKLLH P LR G + Sbjct: 293 YDVDDIQKFVADNAAARAEEAQKAGVLVAQEVARFVKERALREGTPVLARLRQRAEAIARSEVERTLGALGDGLNEKQRKSIEAMGRAIVNKLLHEPTARLRAVGPE 399
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM1_METFK (Glutamyl-tRNA reductase OS=Methylobacillus flagellatus (strain KT / ATCC 51484 / DSM 6875) GN=hemA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.122e-13 Identity = 48/126 (38.10%), Postives = 66/126 (52.38%), Query Frame = -2 Query: 463 VYNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKC--LSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLR-CDGSDSRTLDETLENMHALN 831 +Y VDDL ++V E+R A EA+AII + F W + VPTI+ LR AER R+ EL+K L G D + +D LS + NKLLHGP L G D L+ TL ++ ++ Sbjct: 292 LYTVDDLAQIVQEGMENRQEAAAEAEAIIDMRVENFMQWLKTRSAVPTIRALREQAERHRLNELEKARKLLARGHD----PAQVLDALSNALTNKLLHGPSHALNSATGEDREQLEATLRQLYQIH 413
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM1_GEOUR (Glutamyl-tRNA reductase OS=Geobacter uraniireducens (strain Rf4) GN=hemA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.122e-13 Identity = 51/130 (39.23%), Postives = 73/130 (56.15%), Query Frame = -2 Query: 442 VYNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLRCDGSDSRTLDETLENMHALNRMFGLET 831 +Y VDDL VVA N E R ++A +A+AI+ +E QF W SLE PTI LR+ + IR AEL K L+ ++ + ++ L+ I+NKLLH P L+ +R D ++ AL +F LET Sbjct: 297 LYTVDDLNGVVATNLEQRNKEAEKAEAIVEQEIGQFFKWLSSLEVTPTIVALRSKFDEIRRAELAKTLANW-KELPPDAEKRLEALTSAIMNKLLHQPTSVLKRAEQGNRN-DLYID---ALRNLFELET 421
BLAST of CX043605 vs. ExPASy Swiss-Prot
Match: HEM1_DESRM (Glutamyl-tRNA reductase OS=Desulfotomaculum reducens (strain MI-1) GN=hemA PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.122e-13 Identity = 39/103 (37.86%), Postives = 65/103 (63.11%), Query Frame = -2 Query: 523 VYNVDDLKEVVAANKEDRLRKAMEAQAIISEESKQFAAWRDSLETVPTIKKLRAYAERIRVAELDKCLSKMGDDISKKTRRAVDDLSRGIVNKLLHGPMQHLR 831 +Y+VD L+ VV AN E+R R A++A+ II EE +F W + VPTI L+ E I+ EL + +++G D++++ ++ + L+ IVN+LLH P+ L+ Sbjct: 297 LYDVDHLQNVVDANLEERRRAAVQAEGIIEEELNEFMRWLSTRFVVPTITALKKMGEEIKQRELVRAYNRLG-DLTEREKKIIGSLANSIVNQLLHNPVIKLK 398 The following BLAST results are available for this feature:
BLAST of CX043605 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 105
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043605 ID=CX043605; Name=CX043605; organism=Citrus sinensis; type=EST; length=850bpback to top |