CX043529

Overview
NameCX043529
Unique NameCX043529
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length702
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043529 vs. ExPASy Swiss-Prot
Match: CHSG_PETHY (Chalcone synthase G OS=Petunia hybrida GN=CHSG PE=2 SV=2)

HSP 1 Score: 330.872 bits (847), Expect = 4.096e-90
Identity = 165/224 (73.66%), Postives = 191/224 (85.27%), Query Frame = 2
Query:   38 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPA--DT-HLDSLVGQALFGDGAAA 700
            MATV+EIR AQRA+GPATVLAIGTA P++ V+Q+ YPD+ FRIT S+H TELKEKFK MC+ SMIKKRY++LTEEILK NPN+C + APSL+ARQ+I V E PKLGK AA KAI+EW Q KSKITHL+FCTT+ V++PGADYQLTKLLGL PSVKR MMYQQGC+ GGT LRLAKDLAENNKGARVLVVC EIT ++F+ P+  DT  LD LVGQALF DGA+A
Sbjct:    1 MATVEEIRKAQRAEGPATVLAIGTANPSNCVDQSAYPDFLFRITTSDHKTELKEKFKHMCEGSMIKKRYLHLTEEILKNNPNICEHKAPSLNARQEIAVAEAPKLGKRAAQKAIEEWSQSKSKITHLVFCTTTSVELPGADYQLTKLLGLSPSVKRSMMYQQGCYGGGTALRLAKDLAENNKGARVLVVCVEITVMSFQAPSRNDTDELDVLVGQALFADGASA 224          
BLAST of CX043529 vs. ExPASy Swiss-Prot
Match: DPS2_PINST (Pinosylvin synthase 2 OS=Pinus strobus GN=STS2 PE=2 SV=1)

HSP 1 Score: 320.472 bits (820), Expect = 5.536e-87
Identity = 155/219 (70.78%), Postives = 189/219 (86.30%), Query Frame = 2
Query:   47 VQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYM-APSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAA 700
            ++  R +QRADG A++LAIGTA P + V+Q+ YPDYYFR T +E  T+LK+KFKR+C++S IKKR+MYLTEEILK+NP +CA++  PSLD RQ ++ VEVP+LGKEAA KAI+EWGQPKS+ITHLIFCTT+  D+PGAD+++ KLLGL PSVKR  ++Q GCFAGGTVLRLAKDLAENN+GARVLVVCSE TAVTFRGP++THLD LVG ALFGDGAAA
Sbjct:    9 LEAFRKSQRADGFASILAIGTANPPNVVDQSTYPDYYFRNTNNEDNTDLKDKFKRICERSAIKKRHMYLTEEILKKNPELCAFLEVPSLDTRQAMLAVEVPRLGKEAAEKAIEEWGQPKSRITHLIFCTTTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRLAKDLAENNRGARVLVVCSENTAVTFRGPSETHLDGLVGLALFGDGAAA 227          
BLAST of CX043529 vs. ExPASy Swiss-Prot
Match: DPS1_PINST (Pinosylvin synthase 1 OS=Pinus strobus GN=STS1 PE=1 SV=1)

HSP 1 Score: 320.087 bits (819), Expect = 7.230e-87
Identity = 153/219 (69.86%), Postives = 189/219 (86.30%), Query Frame = 2
Query:   47 VQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYM-APSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAA 700
            ++  R +QRADG A++LAIGTA P + V+Q+ YPDYYFR+T +E  T+LK+KFKR+C++S IKKR+MYLTEEILK+NP +CA++  PSLD RQ ++  EVP+LGKEAA KAI+EWGQPKS+ITHLIFCTT+  D+PGAD+++ KLLGL PSVKR  ++Q GCFAGGTVLRLAKDLAENN+GARVLVVCSE TAVTFRGP++THLD LVG ALFGDGA+A
Sbjct:    9 LEAFRKSQRADGFASILAIGTANPPNVVDQSTYPDYYFRVTNNEDNTDLKDKFKRICERSAIKKRHMYLTEEILKKNPELCAFLEVPSLDTRQAMLAAEVPRLGKEAAEKAIEEWGQPKSRITHLIFCTTTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRLAKDLAENNRGARVLVVCSENTAVTFRGPSETHLDGLVGLALFGDGASA 227          
BLAST of CX043529 vs. ExPASy Swiss-Prot
Match: DPSS_PINSY (Dihydropinosylvin synthase OS=Pinus sylvestris PE=1 SV=1)

HSP 1 Score: 319.701 bits (818), Expect = 9.442e-87
Identity = 153/215 (71.16%), Postives = 190/215 (88.37%), Query Frame = 2
Query:   59 RNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYM-APSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAA 700
            R  QRADG A++LAIGTA P ++V+Q+ YPD+YFRIT +EH TELK+KFKR+C++S IK+RYMYLTEEILK+NP++CA++  PSLDARQ ++ +EVP+L KEAA KAI+EWGQ KS ITHLIFC+T+  D+PGAD+++ KLLGL PSVKR  ++Q GCFAGGTVLR+AKDLAENN+GARVLV+CSE TAVTFRGP++THLDSLVGQALFGDGA+A
Sbjct:   10 RKLQRADGFASILAIGTANPPNAVDQSTYPDFYFRITGNEHNTELKDKFKRICERSAIKQRYMYLTEEILKKNPDVCAFVEVPSLDARQAMLAMEVPRLAKEAAEKAIQEWGQSKSGITHLIFCSTTTPDLPGADFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAVTFRGPSETHLDSLVGQALFGDGASA 224          
BLAST of CX043529 vs. ExPASy Swiss-Prot
Match: CHSY_PERAE (Chalcone synthase OS=Persea americana GN=CHS PE=2 SV=1)

HSP 1 Score: 311.612 bits (797), Expect = 2.571e-84
Identity = 160/222 (72.07%), Postives = 177/222 (79.73%), Query Frame = 2
Query:   38 MATVQEIRNAQRADGPATVLAIGTATPAHSVNQADYPDYY-FRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAA 700
            M  V+ IR  QRA+GPAT++AIGT+TP ++V+Q++YPDYY F    +      +  FKRMC+KSMIKKRYMYLTE   K            L ARQD+VVVEVPKLGKE   KAIK  GQPKSKI  L+FCTTSGVDMPGADYQLTK+ GL PSVKR MMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGP+DTHLDSLVGQALFGDGAAA
Sbjct:    1 MVNVEAIRKVQRAEGPATIMAIGTSTPPNAVDQSEYPDYYYFGSPTASTRPSSRRSFKRMCEKSMIKKRYMYLTETYWKRIQMFVPTWLLPLKARQDMVVVEVPKLGKEVQPKAIKGMGQPKSKINPLVFCTTSGVDMPGADYQLTKVFGLPPSVKRLMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAA 222          
BLAST of CX043529 vs. ExPASy Swiss-Prot
Match: CHSA_IPOPL (Chalcone synthase A (Fragment) OS=Ipomoea platensis GN=CHSA PE=2 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 8.272e-83
Identity = 149/214 (69.63%), Postives = 178/214 (83.18%), Query Frame = 2
Query:   59 RNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAA 700
            R A+R +G A +LA+GTATPA+ V+Q  YPD+YFRIT SEH+ E KEKF+R+C+KS I+KR++ LTEE+LK+NPN+C Y   SL+ RQD +V EVPKLGKEAA KAIKEWG+P S+ITHL+FCTTSGVDMPGAD+QLTKLLGL  SVKR MMYQQGC AG  +LRLAKDLAENNKGARVLVVCSE+T   FRGP+    D+L+ Q LFGDG+AA
Sbjct:   12 RRAKRFEGHAKILAVGTATPANWVDQTTYPDFYFRITNSEHLLEHKEKFRRICNKSKIRKRHLVLTEELLKKNPNLCTYNETSLNTRQDTLVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNISVKRLMMYQQGCNAGAAMLRLAKDLAENNKGARVLVVCSEVTLSVFRGPSLQQEDNLLAQCLFGDGSAA 225          
BLAST of CX043529 vs. ExPASy Swiss-Prot
Match: CHSB_IPOPU (Chalcone synthase B OS=Ipomoea purpurea GN=CHSB PE=3 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 4.105e-82
Identity = 149/214 (69.63%), Postives = 177/214 (82.71%), Query Frame = 2
Query:   59 RNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAA 700
            R A+R +G A +LAIGTATPA  V+Q  YPD+YFRIT S+H+ E KEKF+R+C+KS I+KR++ LTEE+LK+NPN+C Y   SL+ RQDI+V EVPKLGKEAA KAIKEWG+P S+ITHL+FCTTSGVDMPGAD+QLTKLLGL  SVKR MMYQQGC AG  +LRLAKDLAE+NKG RVLVVC+EIT   FRGP+    D+L+ Q LFGDGAAA
Sbjct:   14 RRAKRLEGDAKILAIGTATPASWVDQTTYPDFYFRITNSQHLLEHKEKFRRICNKSKIRKRHLVLTEELLKKNPNLCTYNETSLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNSSVKRLMMYQQGCNAGAAMLRLAKDLAESNKGGRVLVVCAEITINIFRGPSLEQDDNLLAQCLFGDGAAA 227          
BLAST of CX043529 vs. ExPASy Swiss-Prot
Match: CHSA_IPOTF (Chalcone synthase A (Fragment) OS=Ipomoea trifida GN=CHSA PE=3 SV=1)

HSP 1 Score: 303.138 bits (775), Expect = 9.146e-82
Identity = 153/221 (69.23%), Postives = 182/221 (82.35%), Query Frame = 2
Query:   41 ATVQEIRN-AQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAA 700
            ATVQ   + A+R +G A +LAIGTATP + V+QA YPD+YFRIT SEH+ E KEKF+R+C+KS I+KR++ LT+E+LK+NPN+C Y   SL+ RQDI+V EVPKLGKEAA KAIKEWG+P S+ITHL+FCTTSGVDMPGAD+QLTKLLGL  SVKR MMYQQGC AG  +LRL KDLAENNKGARVLVVCSEIT   FRGP+    D+L+ Q LFGDG+AA
Sbjct:    5 ATVQLTDDTAKRFEGHAKLLAIGTATPTNWVDQATYPDFYFRITNSEHLLEHKEKFRRICNKSKIRKRHLVLTKELLKKNPNLCTYNDASLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNSSVKRLMMYQQGCNAGAAMLRLVKDLAENNKGARVLVVCSEITINIFRGPSLEQDDNLLAQCLFGDGSAA 225          
BLAST of CX043529 vs. ExPASy Swiss-Prot
Match: CHSB_IPOCO (Chalcone synthase B (Fragment) OS=Ipomoea cordatotriloba GN=CHSB PE=3 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.194e-81
Identity = 147/214 (68.69%), Postives = 177/214 (82.71%), Query Frame = 2
Query:   59 RNAQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAA 700
            R  +R +G A +LAIGTATPA+ V+Q  YPD+YFRIT S+H+ + KEKF+R+C+KS I+KR+M LTEE+LK+NPN+C Y   SL+ RQDI+V EVPKLGKEAA KAIKEWG+P S+ITHL+FCTTSGVDMPGAD+QLTKLLGL  SVKR MMYQQGC AG  +LRLAKD+AENNKGARVLVVCSE+    FRGP+    D+L+ Q LFGDG+AA
Sbjct:   14 RREKRFEGHAKILAIGTATPANWVDQTTYPDFYFRITNSQHLLDHKEKFRRICNKSKIRKRHMILTEELLKKNPNLCTYNDASLNTRQDILVSEVPKLGKEAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNSSVKRLMMYQQGCNAGAAMLRLAKDVAENNKGARVLVVCSEVMLSVFRGPSLQQEDNLLAQCLFGDGSAA 227          
BLAST of CX043529 vs. ExPASy Swiss-Prot
Match: CHSA_IPOPU (Chalcone synthase A OS=Ipomoea purpurea GN=CHSA PE=3 SV=2)

HSP 1 Score: 302.753 bits (774), Expect = 1.194e-81
Identity = 147/212 (69.34%), Postives = 175/212 (82.55%), Query Frame = 2
Query:   65 AQRADGPATVLAIGTATPAHSVNQADYPDYYFRITKSEHMTELKEKFKRMCDKSMIKKRYMYLTEEILKENPNMCAYMAPSLDARQDIVVVEVPKLGKEAATKAIKEWGQPKSKITHLIFCTTSGVDMPGADYQLTKLLGLRPSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTFRGPADTHLDSLVGQALFGDGAAA 700
            A+R +G A +LAIGTATPA+ V+Q  YPD+YFRIT SEH+ E KEKF+R+C+KS I KR++ +TEE+LK+NPN+C Y   SL+ RQDI+V EVPKLGK+AA KAIKEWG+P S+ITHL+FCTTSGVDMPGAD+QLTKLLGL  SVKR MMYQQGC AG  +LRLAKDLAENNKG RVLVVCSE+    FRGP+    D+L+ Q LFGDGAAA
Sbjct:   16 AKRLEGDAKILAIGTATPANWVDQTTYPDFYFRITNSEHLLEHKEKFRRICNKSKIMKRHLVITEELLKKNPNLCTYNEASLNTRQDILVSEVPKLGKDAAMKAIKEWGRPISEITHLVFCTTSGVDMPGADFQLTKLLGLNSSVKRLMMYQQGCNAGAAMLRLAKDLAENNKGGRVLVVCSEVMLSVFRGPSLQQEDNLLAQCLFGDGAAA 227          
The following BLAST results are available for this feature:
BLAST of CX043529 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 146
Match NameE-valueIdentityDescription
CHSG_PETHY4.096e-9073.66Chalcone synthase G OS=Petunia hybrida GN=CHSG PE=... [more]
DPS2_PINST5.536e-8770.78Pinosylvin synthase 2 OS=Pinus strobus GN=STS2 PE=... [more]
DPS1_PINST7.230e-8769.86Pinosylvin synthase 1 OS=Pinus strobus GN=STS1 PE=... [more]
DPSS_PINSY9.442e-8771.16Dihydropinosylvin synthase OS=Pinus sylvestris PE=... [more]
CHSY_PERAE2.571e-8472.07Chalcone synthase OS=Persea americana GN=CHS PE=2 ... [more]
CHSA_IPOPL8.272e-8369.63Chalcone synthase A (Fragment) OS=Ipomoea platensi... [more]
CHSB_IPOPU4.105e-8269.63Chalcone synthase B OS=Ipomoea purpurea GN=CHSB PE... [more]
CHSA_IPOTF9.146e-8269.23Chalcone synthase A (Fragment) OS=Ipomoea trifida ... [more]
CHSB_IPOCO1.194e-8168.69Chalcone synthase B (Fragment) OS=Ipomoea cordatot... [more]
CHSA_IPOPU1.194e-8169.34Chalcone synthase A OS=Ipomoea purpurea GN=CHSA PE... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11F09_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11F09-K17-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043529 ID=CX043529; Name=CX043529; organism=Citrus sinensis; type=EST; length=702bp
GAGCCTCAAAACATATTCATTACGGGTTTAACTTGCAATGGCAACCGTTC
AAGAGATCAGAAACGCTCAGCGTGCCGACGGCCCGGCCACCGTCCTCGCC
ATCGGTACGGCCACGCCTGCCCACAGTGTCAACCAGGCTGATTATCCCGA
CTATTACTTCAGGATCACAAAGAGCGAGCATATGACGGAGCTTAAAGAGA
AGTTCAAGCGCATGTGTGACAAGTCAATGATTAAGAAGCGTTACATGTAC
TTAACGGAAGAGATTTTGAAGGAAAATCCCAACATGTGCGCTTACATGGC
TCCATCACTCGACGCACGTCAAGACATTGTGGTGGTCGAAGTGCCGAAGC
TCGGGAAAGAAGCTGCTACAAAGGCCATCAAAGAATGGGGCCAGCCCAAG
TCTAAGATCACCCACCTCATCTTCTGCACCACCTCCGGCGTCGACATGCC
CGGCGCCGACTACCAGCTCACCAAACTGCTCGGCCTGCGCCCTTCCGTCA
AGCGCTTCATGATGTACCAACAAGGATGTTTCGCCGGCGGCACTGTTCTT
CGCCTCGCTAAAGACTTGGCTGAGAACAACAAGGGCGCTCGCGTTCTTGT
TGTCTGTTCGGAGATCACGGCGGTCACTTTCCGCGGCCCTGCCGATACTC
ATCTTGATTCTCTTGTGGGCCAGGCTTTGTTCGGTGATGGTGCTGCTGCT
GT
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