CX043528

Overview
NameCX043528
Unique NameCX043528
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: THS1_ARAHY (Stilbene synthase 1 OS=Arachis hypogaea PE=2 SV=1)

HSP 1 Score: 214.157 bits (544), Expect = 7.110e-55
Identity = 109/168 (64.88%), Postives = 128/168 (76.19%), Query Frame = -3
Query:  304 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 807
            +I+G DP   VE P++++VST Q ++P+S GAI G LREVGLTF+L K VP +IS+NI  +LS+AF P+GISD+NSIFWIAH GG AILDQV           KATR VLS YGNMSSACV FI+D MRKKS E    TTGEGLDWGVLFGFGPGLT+ETVVL S+ I
Sbjct:  222 IIIGSDPVPEVENPIFEIVSTDQQLVPNSHGAIGGLLREVGLTFYLNKSVPDIISQNINGALSKAFDPLGISDYNSIFWIAHLGGRAILDQVEQKVNLKPEKMKATRDVLSNYGNMSSACVFFIMDLMRKKSLETGLKTTGEGLDWGVLFGFGPGLTIETVVLRSMAI 389          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: 2PS_GERHY (2-pyrone synthase OS=Gerbera hybrida GN=2PS PE=1 SV=2)

HSP 1 Score: 212.616 bits (540), Expect = 2.069e-54
Identity = 103/170 (60.59%), Postives = 132/170 (77.65%), Query Frame = -3
Query:  298 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIKA 807
            +IVG  P  +VERP++++VST QTILPD++ A+  HLRE GLTF L +DVP +++KNIE +  +A +P+GI+DWNS+FW+ HPGG AILDQV           +A+R VLSEYGN+ SACVLFI+DE+RK+S  E K+TTGEGLD GVLFGFGPG+TVETVVL SV + A
Sbjct:  227 LIVGSGPHLAVERPIFEIVSTDQTILPDTEKAMKLHLREGGLTFQLHRDVPLMVAKNIENAAEKALSPLGITDWNSVFWMVHPGGRAILDQVERKLNLKEDKLRASRHVLSEYGNLISACVLFIIDEVRKRSMAEGKSTTGEGLDCGVLFGFGPGMTVETVVLRSVRVTA 396          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHSB_IPOPU (Chalcone synthase B OS=Ipomoea purpurea GN=CHSB PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.027e-53
Identity = 97/168 (57.74%), Postives = 131/168 (77.98%), Query Frame = -3
Query:  304 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 807
            +IV  DP   +E PL++LVS++QTI+P++D  +  HLRE+GLTFH  K VP ++++N+E  L +AF P GISDWNSIFW+ HPGG AI+D+V           +A+R VLSEYGN++SACVLFILDEMRKKS ++ + TTGEGL+WGV+FGFGPGLT++T+++ SVPI
Sbjct:  228 MIVAADPRPGLETPLFELVSSAQTIVPNTDSHLKLHLREMGLTFHCSKAVPSVLAENVEDCLVKAFEPYGISDWNSIFWVFHPGGNAIVDRVEERLGLGPEKLRASRDVLSEYGNLTSACVLFILDEMRKKSKKDEQMTTGEGLEWGVVFGFGPGLTIDTIIIRSVPI 395          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHSA_IPOPU (Chalcone synthase A OS=Ipomoea purpurea GN=CHSA PE=3 SV=2)

HSP 1 Score: 209.92 bits (533), Expect = 1.341e-53
Identity = 101/168 (60.12%), Postives = 128/168 (76.19%), Query Frame = -3
Query:  304 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 807
            VIVG +P   +E PL++LVS +QT +PD+D  +   LRE+GLTFH  K VP LI++N+E  L +AF P GISDWNSIFWI HPGG AILD V           +A+R VLS+YGN++SACVLFILDE+RKKS ++ + TTGEGL+WGV+FGFGPGLT++TVV+ SVPI
Sbjct:  228 VIVGTEPRPGLETPLFELVSAAQTTIPDTDSYLKLQLREMGLTFHCSKAVPSLITQNVEDCLVKAFEPFGISDWNSIFWILHPGGNAILDGVEEKLGLEPEKLRASRDVLSQYGNLTSACVLFILDEVRKKSKKDEQMTTGEGLEWGVVFGFGPGLTIDTVVIRSVPI 395          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHSF_PETHY (Chalcone synthase F OS=Petunia hybrida GN=CHSF PE=2 SV=2)

HSP 1 Score: 209.149 bits (531), Expect = 2.287e-53
Identity = 102/168 (60.71%), Postives = 122/168 (72.62%), Query Frame = -3
Query:  304 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 807
            VI+G DP+  VE+PL++LVS +QT++PD    I G   +VGLTFHL KDVP L+S+NIEKSL E F P+GI DWNSIFW+ H GG  ILDQV             TR V+SEYGNM+SACVLF+LDEMRK S +E   T  EGL+WGVL  FGPGLT+ET+VLHSV I
Sbjct:  222 VIIGSDPNLEVEKPLFELVSAAQTLVPDCGHKIYGKTSDVGLTFHLHKDVPRLVSQNIEKSLVEVFQPLGIFDWNSIFWVGHAGGREILDQVELKLGLKPEKLNVTRHVMSEYGNMASACVLFVLDEMRKTSTKEGFGTNVEGLEWGVLCSFGPGLTIETIVLHSVSI 389          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHSB_PETHY (Chalcone synthase B OS=Petunia hybrida GN=CHSB PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 3.902e-53
Identity = 100/168 (59.52%), Postives = 125/168 (74.40%), Query Frame = -3
Query:  304 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 807
            +I+G DP   +ERP++++ S +QT +P+ D  +  HLRE+GLTFH  KDVP  I+KN+E  L +AF P+GISDWNS+FWI HPGG AI+DQV           +ATR +LSEYGN+SSAC LFILDE+RKKSA E   T+G+GLD GVL  FGPGLT+ETVVL SVPI
Sbjct:  225 LIIGSDPKPGLERPVFEIFSAAQTFVPNGDCHLALHLREMGLTFHCTKDVPPTIAKNVESCLIKAFEPLGISDWNSLFWILHPGGNAIVDQVESTLGLGPEKLRATRNILSEYGNLSSACCLFILDEIRKKSAREGMRTSGDGLDLGVLLSFGPGLTIETVVLRSVPI 392          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHSY_EQUAR (Chalcone synthase OS=Equisetum arvense GN=CHS PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.529e-52
Identity = 110/178 (61.80%), Postives = 126/178 (70.79%), Query Frame = -3
Query:  310 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFA------------PVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 807
            VI+G DP    E P ++L  +   ILPDSDGAIDGHLREVGLTFHL+KDVPG+ISKNI K L++AF             P  ++D   IFWIAHPGGPAILDQV           +ATR VLSEYGNMSSACVLFI+D MR+ SA+    TTGEGLDWGVL GFGPGLTVETV+L S+
Sbjct:  228 VILGSDP-LPEENPCFELHWSGSNILPDSDGAIDGHLREVGLTFHLMKDVPGIISKNIGKVLNDAFRSAFDESGNAEDRPASVND---IFWIAHPGGPAILDQVEEKMKLAPEKMRATRDVLSEYGNMSSACVLFIMDHMRRMSAQNKLQTTGEGLDWGVLLGFGPGLTVETVLLKSI 401          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: DPS2_PINST (Pinosylvin synthase 2 OS=Pinus strobus GN=STS2 PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.303e-52
Identity = 105/167 (62.87%), Postives = 122/167 (73.05%), Query Frame = -3
Query:  307 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVP 807
            +IVG DP   VE+P +++V T+QT++P+SDGAI G LREVGLTF L   VP LIS NIEK L EAF+   ISDWN +FWIAHPGG AILDQV           +ATR V+SEYGNMSSACV FILDE RK S +   +T+G G   GVLFGFGPGLTVETVVL S+P
Sbjct:  228 LIVGADPIPQVEKPCFEIVWTAQTVVPNSDGAISGKLREVGLTFQLKGAVPDLISTNIEKCLVEAFSQFNISDWNQLFWIAHPGGRAILDQVEASLNLDPTKLRATRHVMSEYGNMSSACVHFILDETRKASRQNGCSTSGGGFQMGVLFGFGPGLTVETVVLKSIP 394          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: DPS1_PINST (Pinosylvin synthase 1 OS=Pinus strobus GN=STS1 PE=1 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.303e-52
Identity = 105/167 (62.87%), Postives = 122/167 (73.05%), Query Frame = -3
Query:  307 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVP 807
            +IVG DP   VE+P +++V T+QT++P+SDGAI G LREVGLTF L   VP LIS NIEK L EAF+   ISDWN +FWIAHPGG AILDQV           +ATR V+SEYGNMSSACV FILDE RK S +   +T+G G   GVLFGFGPGLTVETVVL S+P
Sbjct:  228 LIVGADPIPQVEKPCFEIVWTAQTVVPNSDGAISGKLREVGLTFQLKGAVPDLISTNIEKCLVEAFSQFNISDWNQLFWIAHPGGHAILDQVEASLNLDPTKLRATRHVMSEYGNMSSACVHFILDETRKASRQNGCSTSGGGFQMGVLFGFGPGLTVETVVLKSIP 394          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHSY_PERAE (Chalcone synthase OS=Persea americana GN=CHS PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.255e-51
Identity = 105/171 (61.40%), Postives = 119/171 (69.59%), Query Frame = -3
Query:  307 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKK----SAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVP 807
            +IVG DP   VE P+++LVS  QTILPDSDGAIDGHLREVGLTFHLLK VPGLISKNIEKSL EAF P+GISDWNS+FWIAHPGGPAILD                +   S      + C +F+      +      EE   TTGEG++WGVLFGFGPGLTVETVVLHS+P
Sbjct:  223 LIVGADPVPGVENPMFELVSAGQTILPDSDGAIDGHLREVGLTFHLLKVVPGLISKNIEKSLVEAFEPLGISDWNSLFWIAHPGGPAILDPGGDQTRPEARESCGNQACFSV---SMATCQVFVCSSFSTRCEGSPKEEGLKTTGEGIEWGVLFGFGPGLTVETVVLHSLP 390          
The following BLAST results are available for this feature:
BLAST of CX043528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
THS1_ARAHY7.110e-5564.88Stilbene synthase 1 OS=Arachis hypogaea PE=2 SV=1[more]
2PS_GERHY2.069e-5460.592-pyrone synthase OS=Gerbera hybrida GN=2PS PE=1 S... [more]
CHSB_IPOPU1.027e-5357.74Chalcone synthase B OS=Ipomoea purpurea GN=CHSB PE... [more]
CHSA_IPOPU1.341e-5360.12Chalcone synthase A OS=Ipomoea purpurea GN=CHSA PE... [more]
CHSF_PETHY2.287e-5360.71Chalcone synthase F OS=Petunia hybrida GN=CHSF PE=... [more]
CHSB_PETHY3.902e-5359.52Chalcone synthase B OS=Petunia hybrida GN=CHSB PE=... [more]
CHSY_EQUAR2.529e-5261.80Chalcone synthase OS=Equisetum arvense GN=CHS PE=2... [more]
DPS2_PINST3.303e-5262.87Pinosylvin synthase 2 OS=Pinus strobus GN=STS2 PE=... [more]
DPS1_PINST3.303e-5262.87Pinosylvin synthase 1 OS=Pinus strobus GN=STS1 PE=... [more]
CHSY_PERAE1.255e-5161.40Chalcone synthase OS=Persea americana GN=CHS PE=2 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11F09_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11F09-K17-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043528 ID=CX043528; Name=CX043528; organism=Citrus sinensis; type=EST; length=809bp
CCCCCCCTTTTTACTTTATAACGATGATTTTTTTTCCCACATTAAAATCA
TGACCTTTGGGCATTTACAGATTCAGGACATCCTGTTACAAATTTATTGC
TTTCTCAAATTCCCAAGAATTTATGCATAAACACAAAGCGTTGCCCAGGT
TTGATGACGTCATAAGAGAAAAGGTACGATGCCTTAAATTCAATTGACAA
AACTAAACCTTCACACGATCAACCAATAATTCAAGAGTGAAAGCATACAA
CATAAAGTTACTGAACTACTAAACATACTGATGGAGTTCTCACTTCAAGC
TTTGATGGGGACACTGTGCAGCACAACGGTCTCGACGGTGAGCCCCGGCC
CGAACCCGAACAGCACACCCCAATCTAGCCCTTCGCCGGTGGTGGCTTTC
GCTTCCTCAGCAGACTTCTTTCTCATCTCGTCAAGGATGAACAGGACACA
AGCGCTTGACATGTTACCGTACTCACTCAACACTTGACGTGTGGCCTTCA
GCTTCTCCTCTTTGAGGCCGAGTTTAGACTCCACTTGGTCCAGAATTGCG
GGCCCACCGGGGTGAGCGATCCAGAATATCGAGTTCCAGTCGCTGATGCC
AACCGGGGCGAACGCTTCCGACAGGCTTTTCTCTATATTCTTTGAGATCA
AGCCGGGGACGTCTTTAAGCAAATGGAAAGTGAGACCGACTTCGCGCAAG
TGTCCGTCAATTGCACCGTCAGAGTCAGGGAGGATCGTCTGCGAAGTCGA
CACAAGCTGATACAACGGACGCTCGACCGACGTGTCAGGATCGGGACCCA
CGATCACAG
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