CX043528

Overview
NameCX043528
Unique NameCX043528
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: DPSS_PINSY (Dihydropinosylvin synthase OS=Pinus sylvestris PE=1 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 6.887e-50
Identity = 99/169 (58.58%), Postives = 122/169 (72.19%), Query Frame = -3
Query:  301 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIK 807
            +IVG DP   VE+  +++V T+QT++P+S+GAI G +REVGLTF L   VP LIS NIE  + EAF+   ISDWN +FW+ HPGG AILD+V             TR V+SEYGNMSSACV FILD+ RK S +   +TTGEGL+ GVLFGFGPGLT+ETVVL SVPI+
Sbjct:  225 LIVGADPIPQVEKACFEIVWTAQTVVPNSEGAIGGKVREVGLTFQLKGAVPDLISANIENCMVEAFSQFKISDWNKLFWVVHPGGRAILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCSTTGEGLEMGVLFGFGPGLTIETVVLKSVPIQ 393          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: TBSYN_HYPAN (Trihydroxybenzophenone synthase OS=Hypericum androsaemum PE=1 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 3.660e-43
Identity = 89/169 (52.66%), Postives = 113/169 (66.86%), Query Frame = -3
Query:  304 VIVGPDPDT-SVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 807
            +I+G  PD  S ER ++ ++S SQTI+P SDGAI  H  E+G+++ L +DV  L   NI   + EAF+P+G+SDWNS+F+  HPGG  I+D V            ATR VL EYGNM SACV+FILDE+RK S    K TTG+G ++G L G GPGLTVE VVL SVPI
Sbjct:  225 LIIGACPDVASGERAVFNILSASQTIVPGSDGAITAHFYEMGMSYFLKEDVIPLFRDNIAAVMEEAFSPLGVSDWNSLFYSIHPGGRGIIDGVAGNLGIKDENLVATRHVLGEYGNMGSACVMFILDELRKSSKVNGKPTTGDGKEFGCLIGLGPGLTVEAVVLQSVPI 393          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: VPS_PSINU (Phloroisovalerophenone synthase OS=Psilotum nudum GN=VPS PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 5.844e-41
Identity = 83/174 (47.70%), Postives = 114/174 (65.52%), Query Frame = -3
Query:  298 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNI----EKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIKA 807
            +IVG DP    E   +++     +++PDSD A+ G+++E GL  HL K +P LI +NI    + +L E F     S +N +FW+ HPGGPAILD V            A+R++LS+YGNM S  VLF+LD MRK+S +E  +TTGEGL+WGV+ GFGPGLTVET++L SVP +A
Sbjct:  229 LIVGADPIPHAENASFEIHWARSSVVPDSDDAVTGNIKENGLVLHLSKTIPDLIGQNIHTLLKDALEEMFDACNPSSFNDLFWVIHPGGPAILDAVEEELNLKSERTHASREILSQYGNMVSPGVLFVLDYMRKRSVDERLSTTGEGLEWGVMLGFGPGLTVETLILKSVPTQA 402          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHSA_IPOTF (Chalcone synthase A (Fragment) OS=Ipomoea trifida GN=CHSA PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.545e-38
Identity = 75/135 (55.56%), Postives = 102/135 (75.56%), Query Frame = -3
Query:  403 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEE 807
            +IVG DP   +E PL++LVS++QTI+P++D  +  HLRE+GLTFH  + VP ++++N+E  L +AF P GISDWNSIFW+ HPGG AI+D+V           +A+R VLSEYGN++SACVLFILDEMRKKS ++
Sbjct:  226 MIVGKDPRPGLETPLFELVSSAQTIVPNTDSHLKLHLREMGLTFHCSRAVPSVLAENVEDCLVKAFEPYGISDWNSIFWVFHPGGNAIVDRVEERLGLGPERLRASRDVLSEYGNLTSACVLFILDEMRKKSKKD 360          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHSA_IPOPL (Chalcone synthase A (Fragment) OS=Ipomoea platensis GN=CHSA PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 3.545e-38
Identity = 78/135 (57.78%), Postives = 100/135 (74.07%), Query Frame = -3
Query:  403 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEE 807
            VIVG DP   +E PL++LVS++QTI+PD+D  +  HL E+GLTFH  K VP LI++N+E  L +AF P GISDWNSIFWI HPGG AILD+V           +A+R VLSEYGN++SACVLFILD +R+KS ++
Sbjct:  226 VIVGTDPRPGLETPLFELVSSAQTIIPDTDSHLKLHLLEMGLTFHCSKAVPSLITQNVEDCLVKAFEPFGISDWNSIFWILHPGGNAILDRVEERLGLGPEKLRASRDVLSEYGNLTSACVLFILDLVRRKSKKQ 360          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHSB_IPOTF (Chalcone synthase B (Fragment) OS=Ipomoea trifida GN=CHSB PE=3 SV=1)

HSP 1 Score: 156.377 bits (394), Expect = 1.759e-37
Identity = 73/135 (54.07%), Postives = 99/135 (73.33%), Query Frame = -3
Query:  403 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEE 807
            +I+G DP   +E PL++L+S +QTI+PD+D  +  H+RE+GLTFH  K VP  I++N+E  L +AF P GISDWNSIFW+ HPGG AI++ V           +A+R VLSEYGN++SACVLFILDE+RKKS ++
Sbjct:  230 IIIGTDPRPGLETPLFELISAAQTIIPDTDSHLKLHVREMGLTFHCSKAVPTFITQNVEDCLVKAFEPYGISDWNSIFWVLHPGGNAIVEGVEETLGLAPEKLRASRDVLSEYGNLTSACVLFILDEVRKKSKKD 364          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHSA_IPOCO (Chalcone synthase A (Fragment) OS=Ipomoea cordatotriloba GN=CHSA PE=3 SV=1)

HSP 1 Score: 155.992 bits (393), Expect = 2.298e-37
Identity = 74/135 (54.81%), Postives = 101/135 (74.81%), Query Frame = -3
Query:  403 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEE 807
            +I G DP   +E PL++LVS++QTI+P++D  +  HLRE+GLTFH  + VP ++++N+E  L +AF P GISDWNSIFW+ HPGG AI+D+V           +A+R VLSEYGN++SACVLFILDEMRKKS ++
Sbjct:  226 MIDGKDPRPGLETPLFELVSSAQTIVPNTDSHLKLHLREMGLTFHCSRAVPSVLAENVEDCLVKAFEPYGISDWNSIFWVFHPGGNAIVDRVEERSGLGPERLRASRDVLSEYGNLTSACVLFILDEMRKKSKKD 360          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHSB_IPONI (Chalcone synthase B (Fragment) OS=Ipomoea nil GN=CHSB PE=3 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 3.001e-37
Identity = 74/135 (54.81%), Postives = 100/135 (74.07%), Query Frame = -3
Query:  403 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEE 807
            +IV  DP   +E PL++LVS++QTI+P++D  +  HLRE+GLTFH  K VP ++++N+E  L +AF P GISDWNSIFW+ HPGG AI+D+V           +A+R VLSEYGN++SACVLF LDEMRKKS ++
Sbjct:  228 MIVAADPRPGLETPLFELVSSAQTIVPNTDSHLKLHLREMGLTFHCSKAVPSVLAENVEDCLVKAFEPYGISDWNSIFWVFHPGGNAIVDRVEERLGLGPEKFRASRDVLSEYGNLTSACVLFTLDEMRKKSKKD 362          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHSA_IPOTR (Chalcone synthase A (Fragment) OS=Ipomoea triloba GN=CHSA PE=3 SV=1)

HSP 1 Score: 154.451 bits (389), Expect = 6.686e-37
Identity = 74/135 (54.81%), Postives = 101/135 (74.81%), Query Frame = -3
Query:  403 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEE 807
            +IVG DP   +E PL++LVS++QTI+P++D  +   LRE+GLTFH  + VP ++++N+E  L +AF P GISDWNSIFW+ HPGG AI+D+V           +A+R VLSEYGN++SACVLFILDEMRKKS ++
Sbjct:  226 MIVGKDPRPGLETPLFELVSSAQTIVPNTDSHLKLTLREMGLTFHCSRAVPSVLAENVEDCLVKAFEPYGISDWNSIFWVFHPGGYAIVDRVEERLGLGPERLRASRDVLSEYGNLTSACVLFILDEMRKKSKKD 360          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHSB_IPOCO (Chalcone synthase B (Fragment) OS=Ipomoea cordatotriloba GN=CHSB PE=3 SV=1)

HSP 1 Score: 152.91 bits (385), Expect = 1.945e-36
Identity = 73/135 (54.07%), Postives = 98/135 (72.59%), Query Frame = -3
Query:  403 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEE 807
            +IVG DP   +E PL++L+S +QTI+P++D  +  H+RE+GLTFH  K VP  I++N+E  L +AF P GISDWNSIFW+ HPGG AI+D V           +A+R VLS YGN++SACVLFILDE+RKKS ++
Sbjct:  228 LIVGTDPRPGLETPLFELISAAQTIIPNTDSHLKLHVREMGLTFHCSKAVPTFITQNVEDCLVKAFEPYGISDWNSIFWVLHPGGNAIVDGVEETLGLAPEKLRASRDVLSGYGNLTSACVLFILDEVRKKSKKD 362          
The following BLAST results are available for this feature:
BLAST of CX043528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
DPSS_PINSY6.887e-5058.58Dihydropinosylvin synthase OS=Pinus sylvestris PE=... [more]
TBSYN_HYPAN3.660e-4352.66Trihydroxybenzophenone synthase OS=Hypericum andro... [more]
VPS_PSINU5.844e-4147.70Phloroisovalerophenone synthase OS=Psilotum nudum ... [more]
CHSA_IPOTF3.545e-3855.56Chalcone synthase A (Fragment) OS=Ipomoea trifida ... [more]
CHSA_IPOPL3.545e-3857.78Chalcone synthase A (Fragment) OS=Ipomoea platensi... [more]
CHSB_IPOTF1.759e-3754.07Chalcone synthase B (Fragment) OS=Ipomoea trifida ... [more]
CHSA_IPOCO2.298e-3754.81Chalcone synthase A (Fragment) OS=Ipomoea cordatot... [more]
CHSB_IPONI3.001e-3754.81Chalcone synthase B (Fragment) OS=Ipomoea nil GN=C... [more]
CHSA_IPOTR6.686e-3754.81Chalcone synthase A (Fragment) OS=Ipomoea triloba ... [more]
CHSB_IPOCO1.945e-3654.07Chalcone synthase B (Fragment) OS=Ipomoea cordatot... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11F09_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11F09-K17-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043528 ID=CX043528; Name=CX043528; organism=Citrus sinensis; type=EST; length=809bp
CCCCCCCTTTTTACTTTATAACGATGATTTTTTTTCCCACATTAAAATCA
TGACCTTTGGGCATTTACAGATTCAGGACATCCTGTTACAAATTTATTGC
TTTCTCAAATTCCCAAGAATTTATGCATAAACACAAAGCGTTGCCCAGGT
TTGATGACGTCATAAGAGAAAAGGTACGATGCCTTAAATTCAATTGACAA
AACTAAACCTTCACACGATCAACCAATAATTCAAGAGTGAAAGCATACAA
CATAAAGTTACTGAACTACTAAACATACTGATGGAGTTCTCACTTCAAGC
TTTGATGGGGACACTGTGCAGCACAACGGTCTCGACGGTGAGCCCCGGCC
CGAACCCGAACAGCACACCCCAATCTAGCCCTTCGCCGGTGGTGGCTTTC
GCTTCCTCAGCAGACTTCTTTCTCATCTCGTCAAGGATGAACAGGACACA
AGCGCTTGACATGTTACCGTACTCACTCAACACTTGACGTGTGGCCTTCA
GCTTCTCCTCTTTGAGGCCGAGTTTAGACTCCACTTGGTCCAGAATTGCG
GGCCCACCGGGGTGAGCGATCCAGAATATCGAGTTCCAGTCGCTGATGCC
AACCGGGGCGAACGCTTCCGACAGGCTTTTCTCTATATTCTTTGAGATCA
AGCCGGGGACGTCTTTAAGCAAATGGAAAGTGAGACCGACTTCGCGCAAG
TGTCCGTCAATTGCACCGTCAGAGTCAGGGAGGATCGTCTGCGAAGTCGA
CACAAGCTGATACAACGGACGCTCGACCGACGTGTCAGGATCGGGACCCA
CGATCACAG
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