CX043528
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHSY_FRAAN (Chalcone synthase RJ5 (Fragment) OS=Fragaria ananassa PE=2 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 7.392e-36 Identity = 72/96 (75.00%), Postives = 79/96 (82.29%), Query Frame = -3 Query: 310 ISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 597 I+DWNS+FWIAHPGGPAILDQV +ATR +LSEYGNMSSACVLFILDE+R+KSA TTGEGL+WGVLFGFGPGLTVETVVLHSV Sbjct: 2 ITDWNSLFWIAHPGGPAILDQVEAKLALKPEKLEATRHILSEYGNMSSACVLFILDEVRRKSAANGHKTTGEGLEWGVLFGFGPGLTVETVVLHSV 97
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHSB_IPOTR (Chalcone synthase B (Fragment) OS=Ipomoea triloba GN=CHSB PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 9.654e-36 Identity = 72/132 (54.55%), Postives = 98/132 (74.24%), Query Frame = -3 Query: 412 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKS 807 +IVG DP +E PL++LVS++QTI+P++D + LRE+GLTFH + VP ++++N+E L +AF P GISDWNSIFW+ HPGG AI+D+V +A+R VLSEYGN++SACVLFILDE+R KS Sbjct: 230 MIVGTDPRPDLETPLFELVSSAQTIVPNTDSHLKLTLREMGLTFHCSRAVPSVLAENVEDCLVKAFEPYGISDWNSIFWVFHPGGNAIVDRVEERLGLGAQRFRASRDVLSEYGNLTSACVLFILDEVRNKS 361
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHS4_TRISU (Chalcone synthase 4 (Fragment) OS=Trifolium subterraneum GN=CHS4 PE=2 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.067e-34 Identity = 66/90 (73.33%), Postives = 81/90 (90.00%), Query Frame = -3 Query: 538 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILD 807 +IVG DP +E+P++++V T+QTI PDS+GAIDGHLRE GLTFHLLKDVPG++SKNI+K+L EAF P+GISD+NSIFWIAHPGGPAILD Sbjct: 222 LIVGSDPVPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNIDKALVEAFQPLGISDYNSIFWIAHPGGPAILD 311
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHSC_IPOPU (Chalcone synthase C (Fragment) OS=Ipomoea purpurea GN=CHSC PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 7.650e-33 Identity = 70/123 (56.91%), Postives = 87/123 (70.73%), Query Frame = -3 Query: 439 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLF 807 VIVG +P +E PL++LVS +QT +PD+D + LRE+GLTFH K VP LI++NIE L +AF P GISDWNSIFWI HPGG AILD V +A+R VLS+YGN++SACVLF Sbjct: 228 VIVGTEPRPGLETPLFELVSAAQTTIPDTDSYLKLQLREMGLTFHCSKAVPSLITQNIEDCLVKAFEPFGISDWNSIFWILHPGGNAILDGVEEKLGLEPEKLRASRDVLSQYGNLTSACVLF 350
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHSA_IPONI (Chalcone synthase A (Fragment) OS=Ipomoea nil GN=CHSA PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.884e-31 Identity = 67/120 (55.83%), Postives = 85/120 (70.83%), Query Frame = -3 Query: 448 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSAC 807 VIVG +P +E PL++LVS +QT +PD+D + HLRE+GLTFH K VP LI++N+E L +AF P GISDWNSIFWI HPGG AILD+V +A+R VLSE GN++SAC Sbjct: 225 VIVGTEPRPGLETPLFELVSAAQTTIPDTDSHLKLHLREMGLTFHCSKAVPSLITQNVEDYLVKAFEPFGISDWNSIFWILHPGGIAILDRVEEKLGLEPEKLRASRDVLSESGNLTSAC 344 The following BLAST results are available for this feature:
BLAST of CX043528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043528 ID=CX043528; Name=CX043528; organism=Citrus sinensis; type=EST; length=809bpback to top |