CX043528

Overview
NameCX043528
Unique NameCX043528
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHSY_HYPAN (Chalcone synthase OS=Hypericum androsaemum PE=1 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 7.077e-71
Identity = 129/168 (76.79%), Postives = 145/168 (86.31%), Query Frame = -3
Query:  304 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 807
            +I+G DP   VE+PL++LVS +QTILPDS+GAIDGHLREVGLTFHLLKDVPGLISKN+EKSL+EAF P+GISDWNS+FWIAHPGGPAILDQV           +ATR VLSEYGNMSSACVLFILDEMR+KS E+   TTGEG++WGVLFGFGPGLTVETVVLHSV I
Sbjct:  222 IIIGSDPIPEVEKPLFELVSAAQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNVEKSLTEAFKPLGISDWNSLFWIAHPGGPAILDQVEAKLSLKPEKLRATRHVLSEYGNMSSACVLFILDEMRRKSKEDGLKTTGEGIEWGVLFGFGPGLTVETVVLHSVAI 389          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHSJ_PETHY (Chalcone synthase J OS=Petunia hybrida GN=CHSJ PE=2 SV=2)

HSP 1 Score: 266.544 bits (680), Expect = 1.207e-70
Identity = 131/166 (78.92%), Postives = 143/166 (86.14%), Query Frame = -3
Query:  310 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 807
            +I+G DP   VERPL++LVS SQT+LPDS+GAIDGHLREVGLTFHLLKDVPGLISKNI+KSL EAF P+GISDWNSIFWIAHPGGPAILDQV           +ATR VLSEYGNMSSACVLFILDEMRK S++E   TTGEGL+WGVLFGFGPGLTVETVVLHSV
Sbjct:  222 IIIGSDPLPGVERPLFELVSASQTLLPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIQKSLVEAFQPLGISDWNSIFWIAHPGGPAILDQVELKLGLKPEKLRATRHVLSEYGNMSSACVLFILDEMRKASSKEGLGTTGEGLEWGVLFGFGPGLTVETVVLHSV 387          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHS2_CAMSI (Chalcone synthase 2 OS=Camellia sinensis GN=CHS2 PE=2 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 1.207e-70
Identity = 131/166 (78.92%), Postives = 143/166 (86.14%), Query Frame = -3
Query:  310 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 807
            +IVG DP   VE+PL++LVS +QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL+EAF P+ I+DWNS+FWIAHPGGPAILDQV           +ATR VLSEYGNMSSACVLFILDEMRK SA++   TTGEGLDWGVLFGFGPGLTVETVVLHSV
Sbjct:  222 IIVGSDPIPEVEKPLFELVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLNEAFQPLNITDWNSLFWIAHPGGPAILDQVELKLALKPEKLRATRHVLSEYGNMSSACVLFILDEMRKSSAKKGLKTTGEGLDWGVLFGFGPGLTVETVVLHSV 387          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHS1_SINAL (Chalcone synthase 1 OS=Sinapis alba GN=CHS1 PE=2 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 1.207e-70
Identity = 131/169 (77.51%), Postives = 145/169 (85.80%), Query Frame = -3
Query:  304 VIVGPDPDTSV-ERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 807
            +IVG D D S  E+P++++VS +QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF P+GISDWNS+FWIAHPGGPAILD V           +ATR VLSEYGNMSSACVLFILDEMR+KS E+  ATTGEGL+WGVLFGFGPGLTVETVVLHSVP+
Sbjct:  227 LIVGSDADISAGEKPIFEMVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLDEAFKPLGISDWNSLFWIAHPGGPAILDDVEKKLGLKAEKMRATRHVLSEYGNMSSACVLFILDEMRRKSVEDGVATTGEGLEWGVLFGFGPGLTVETVVLHSVPV 395          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHS8_BROFI (Chalcone synthase 8 OS=Bromheadia finlaysoniana GN=CHS8 PE=2 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 1.577e-70
Identity = 127/168 (75.60%), Postives = 145/168 (86.31%), Query Frame = -3
Query:  304 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 807
            +IVG DPD++ ERPL+QLVS SQTILP+S+GAIDGHLRE+GLTFHLLKDVPGLISKNI+K L +AF P+G+ DWNSIFWIAHPGGPAILDQV            A+R VL+EYGNMSSACVLFILDEMR++SAE  +ATTGEGL+WGVLFGFGPGLTVET+VL SVPI
Sbjct:  223 IIVGSDPDSATERPLFQLVSASQTILPESEGAIDGHLREIGLTFHLLKDVPGLISKNIQKCLLDAFKPLGVHDWNSIFWIAHPGGPAILDQVEIKLGLKAEKLAASRNVLAEYGNMSSACVLFILDEMRRRSAEAGQATTGEGLEWGVLFGFGPGLTVETIVLRSVPI 390          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHS4_BROFI (Chalcone synthase 4 OS=Bromheadia finlaysoniana GN=CHS4 PE=2 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 1.577e-70
Identity = 127/168 (75.60%), Postives = 145/168 (86.31%), Query Frame = -3
Query:  304 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 807
            +IVG DPD++ ERPL+QLVS SQTILP+S+GAIDGHLRE+GLTFHLLKDVPGLISKNI+K L +AF P+G+ DWNSIFWIAHPGGPAILDQV            A+R VL+EYGNMSSACVLFILDEMR++SAE  +ATTGEGL+WGVLFGFGPGLTVET+VL SVPI
Sbjct:  223 IIVGSDPDSATERPLFQLVSASQTILPESEGAIDGHLREIGLTFHLLKDVPGLISKNIQKCLLDAFKPLGVHDWNSIFWIAHPGGPAILDQVEIKLGLKAEKLAASRSVLAEYGNMSSACVLFILDEMRRRSAEAGQATTGEGLEWGVLFGFGPGLTVETIVLRSVPI 390          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHS3_BROFI (Chalcone synthase 3 OS=Bromheadia finlaysoniana GN=CHS3 PE=2 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 1.577e-70
Identity = 127/168 (75.60%), Postives = 145/168 (86.31%), Query Frame = -3
Query:  304 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 807
            +IVG DPD++ ERPL+QLVS SQTILP+S+GAIDGHLRE+GLTFHLLKDVPGLISKNI+K L +AF P+G+ DWNSIFWIAHPGGPAILDQV            A+R VL+EYGNMSSACVLFILDEMR++SAE  +ATTGEGL+WGVLFGFGPGLTVET+VL SVPI
Sbjct:  223 IIVGSDPDSATERPLFQLVSASQTILPESEGAIDGHLREIGLTFHLLKDVPGLISKNIQKCLLDAFKPLGVHDWNSIFWIAHPGGPAILDQVEIKLGLKAEKLAASRNVLAEYGNMSSACVLFILDEMRRRSAEAGQATTGEGLEWGVLFGFGPGLTVETIVLRSVPI 390          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHSA_PETHY (Chalcone synthase A OS=Petunia hybrida GN=CHSA PE=2 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 2.059e-70
Identity = 131/166 (78.92%), Postives = 142/166 (85.54%), Query Frame = -3
Query:  310 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 807
            +I+G DP   VERPL++LVS +QT+LPDS GAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF P+GISDWNS+FWIAHPGGPAILDQV           KATR VLS+YGNMSSACVLFILDEMRK SA+E   TTGEGL+WGVLFGFGPGLTVETVVLHSV
Sbjct:  222 IIIGSDPIPGVERPLFELVSAAQTLLPDSHGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLEEAFKPLGISDWNSLFWIAHPGGPAILDQVEIKLGLKPEKLKATRNVLSDYGNMSSACVLFILDEMRKASAKEGLGTTGEGLEWGVLFGFGPGLTVETVVLHSV 387          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHS9_DAUCA (Chalcone synthase 9 OS=Daucus carota GN=CHS9 PE=2 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 2.059e-70
Identity = 131/167 (78.44%), Postives = 142/167 (85.03%), Query Frame = -3
Query:  307 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVP 807
            VIVG DP   +E+PL+++VS +QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNI KSL EAF P+GISDWNSIFWIAHPGGPAILDQV           K+TRQVL +YGNMSSACVLFILDEMR  SA++   TTGEGLDWGVLFGFGPGLTVETVVLHSVP
Sbjct:  222 VIVGSDPVIGIEKPLFEIVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIRKSLVEAFKPLGISDWNSIFWIAHPGGPAILDQVETELSLKPDKLKSTRQVLRDYGNMSSACVLFILDEMRNASAKDGHRTTGEGLDWGVLFGFGPGLTVETVVLHSVP 388          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHS3_GERHY (Chalcone synthase 3 OS=Gerbera hybrida GN=CHS3 PE=2 SV=1)

HSP 1 Score: 265.774 bits (678), Expect = 2.059e-70
Identity = 127/167 (76.05%), Postives = 146/167 (87.43%), Query Frame = -3
Query:  307 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVP 807
            VI+G DPD SVERPL+++VS +QTILPDS+GAIDGHL+EVGLTFHLLKDVP LI+KNIEK+L +AF+P+ I+DWNSIFWIAHPGGPAILDQV           +A+R VLSEYGNMSSACVLFILDEMRKKS ++ K TTGEGL+WGVLFGFGPGLTVETVVLHS+P
Sbjct:  228 VIIGSDPDLSVERPLFEMVSAAQTILPDSEGAIDGHLKEVGLTFHLLKDVPALIAKNIEKALIQAFSPLNINDWNSIFWIAHPGGPAILDQVEFKLGLREEKLRASRHVLSEYGNMSSACVLFILDEMRKKSIKDGKTTTGEGLEWGVLFGFGPGLTVETVVLHSLP 394          
The following BLAST results are available for this feature:
BLAST of CX043528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHSY_HYPAN7.077e-7176.79Chalcone synthase OS=Hypericum androsaemum PE=1 SV... [more]
CHSJ_PETHY1.207e-7078.92Chalcone synthase J OS=Petunia hybrida GN=CHSJ PE=... [more]
CHS2_CAMSI1.207e-7078.92Chalcone synthase 2 OS=Camellia sinensis GN=CHS2 P... [more]
CHS1_SINAL1.207e-7077.51Chalcone synthase 1 OS=Sinapis alba GN=CHS1 PE=2 S... [more]
CHS8_BROFI1.577e-7075.60Chalcone synthase 8 OS=Bromheadia finlaysoniana GN... [more]
CHS4_BROFI1.577e-7075.60Chalcone synthase 4 OS=Bromheadia finlaysoniana GN... [more]
CHS3_BROFI1.577e-7075.60Chalcone synthase 3 OS=Bromheadia finlaysoniana GN... [more]
CHSA_PETHY2.059e-7078.92Chalcone synthase A OS=Petunia hybrida GN=CHSA PE=... [more]
CHS9_DAUCA2.059e-7078.44Chalcone synthase 9 OS=Daucus carota GN=CHS9 PE=2 ... [more]
CHS3_GERHY2.059e-7076.05Chalcone synthase 3 OS=Gerbera hybrida GN=CHS3 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11F09_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11F09-K17-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043528 ID=CX043528; Name=CX043528; organism=Citrus sinensis; type=EST; length=809bp
CCCCCCCTTTTTACTTTATAACGATGATTTTTTTTCCCACATTAAAATCA
TGACCTTTGGGCATTTACAGATTCAGGACATCCTGTTACAAATTTATTGC
TTTCTCAAATTCCCAAGAATTTATGCATAAACACAAAGCGTTGCCCAGGT
TTGATGACGTCATAAGAGAAAAGGTACGATGCCTTAAATTCAATTGACAA
AACTAAACCTTCACACGATCAACCAATAATTCAAGAGTGAAAGCATACAA
CATAAAGTTACTGAACTACTAAACATACTGATGGAGTTCTCACTTCAAGC
TTTGATGGGGACACTGTGCAGCACAACGGTCTCGACGGTGAGCCCCGGCC
CGAACCCGAACAGCACACCCCAATCTAGCCCTTCGCCGGTGGTGGCTTTC
GCTTCCTCAGCAGACTTCTTTCTCATCTCGTCAAGGATGAACAGGACACA
AGCGCTTGACATGTTACCGTACTCACTCAACACTTGACGTGTGGCCTTCA
GCTTCTCCTCTTTGAGGCCGAGTTTAGACTCCACTTGGTCCAGAATTGCG
GGCCCACCGGGGTGAGCGATCCAGAATATCGAGTTCCAGTCGCTGATGCC
AACCGGGGCGAACGCTTCCGACAGGCTTTTCTCTATATTCTTTGAGATCA
AGCCGGGGACGTCTTTAAGCAAATGGAAAGTGAGACCGACTTCGCGCAAG
TGTCCGTCAATTGCACCGTCAGAGTCAGGGAGGATCGTCTGCGAAGTCGA
CACAAGCTGATACAACGGACGCTCGACCGACGTGTCAGGATCGGGACCCA
CGATCACAG
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