CX043528

Overview
NameCX043528
Unique NameCX043528
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHSE_IPOPU (Chalcone synthase E OS=Ipomoea purpurea GN=CHSE PE=2 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 3.512e-70
Identity = 130/166 (78.31%), Postives = 143/166 (86.14%), Query Frame = -3
Query:  310 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 807
            +I+G DPD  +ERPL+QLVS +QTILPDS GAIDGHLREVGLTFHLLKDVPGLISK+IEKSL+EAF P+GI DWNS+FWIAHPGGPAILDQV           +ATR VLSEYGNMSSACVLFILDEMRK S++E   TTGEGL+WGVLFGFGPGLTVETVVLHSV
Sbjct:  222 LIIGSDPDPDLERPLFQLVSAAQTILPDSGGAIDGHLREVGLTFHLLKDVPGLISKHIEKSLNEAFQPLGIRDWNSLFWIAHPGGPAILDQVEEKLELKPEKLRATRHVLSEYGNMSSACVLFILDEMRKASSKEGLNTTGEGLEWGVLFGFGPGLTVETVVLHSV 387          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHSE_IPONI (Chalcone synthase E OS=Ipomoea nil GN=CHSE PE=2 SV=1)

HSP 1 Score: 265.003 bits (676), Expect = 3.512e-70
Identity = 130/166 (78.31%), Postives = 143/166 (86.14%), Query Frame = -3
Query:  310 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 807
            +I+G DPD  +ERPL+QLVS +QTILPDS GAIDGHLREVGLTFHLLKDVPGLISK+IEKSL+EAF P+GI DWNS+FWIAHPGGPAILDQV           +ATR VLSEYGNMSSACVLFILDEMRK S++E   TTGEGL+WGVLFGFGPGLTVETVVLHSV
Sbjct:  222 LIIGSDPDPDLERPLFQLVSAAQTILPDSGGAIDGHLREVGLTFHLLKDVPGLISKHIEKSLNEAFQPLGIHDWNSLFWIAHPGGPAILDQVEEKLELKPEKLRATRHVLSEYGNMSSACVLFILDEMRKASSKEGLNTTGEGLEWGVLFGFGPGLTVETVVLHSV 387          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHSY_HYDMC (Chalcone synthase OS=Hydrangea macrophylla GN=CHS PE=2 SV=1)

HSP 1 Score: 264.233 bits (674), Expect = 5.991e-70
Identity = 130/166 (78.31%), Postives = 141/166 (84.94%), Query Frame = -3
Query:  310 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 807
            VI+G DP   VE+PL+++VS +QTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF P+ ISDWNSIFWIAHPGGPAILDQV           +ATR VLS+YGNMSSACVLFI+DEMRK SAEE   TTGEGL+WGVLFGFGPGLTVETVVLH V
Sbjct:  222 VIIGSDPMPEVEKPLFEIVSAAQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLVEAFRPLDISDWNSIFWIAHPGGPAILDQVEKKLALKPEKLRATRNVLSDYGNMSSACVLFIMDEMRKNSAEEGLMTTGEGLEWGVLFGFGPGLTVETVVLHGV 387          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHSY_DIAMO (Chalcone synthase OS=Dianthus monspessulanus GN=CHS PE=2 SV=1)

HSP 1 Score: 263.462 bits (672), Expect = 1.022e-69
Identity = 124/168 (73.81%), Postives = 141/168 (83.93%), Query Frame = -3
Query:  304 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 807
            +IVG DPD S+ERPL+Q+    QT+LPDS+GAIDGHLREVGLTFHLLKDVPG+ISKNI  +L EAF+P+G+SDWN++FWIAHPGGPAILDQV            ATR VLS++GNMSSACVLFILDEMRKKS  +   TTGEGLDWGVLFGFGPGLTVETVVLHSVP+
Sbjct:  222 LIVGSDPDLSIERPLFQMAWAGQTLLPDSEGAIDGHLREVGLTFHLLKDVPGIISKNITNALEEAFSPIGVSDWNNLFWIAHPGGPAILDQVEAKLGLKEEKLAATRNVLSDFGNMSSACVLFILDEMRKKSLRDGATTTGEGLDWGVLFGFGPGLTVETVVLHSVPL 389          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHS1_SOLLC (Chalcone synthase 1 OS=Solanum lycopersicum GN=CHS1 PE=2 SV=2)

HSP 1 Score: 263.462 bits (672), Expect = 1.022e-69
Identity = 128/166 (77.11%), Postives = 142/166 (85.54%), Query Frame = -3
Query:  310 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 807
            +I+G DP   VERPL++LVS +QT++PDS+GAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF P+GISDWNS+FWIAHPGGPAILDQV           +ATR+VLS YGNMSSACVLFILDEMRK S +E   TTGEGL+WGVLFGFGPGLTVETVVLHSV
Sbjct:  222 IIIGSDPIIGVERPLFELVSAAQTLVPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLLEAFQPLGISDWNSLFWIAHPGGPAILDQVELKLGLKPEKLRATREVLSNYGNMSSACVLFILDEMRKASTKEGLGTTGEGLEWGVLFGFGPGLTVETVVLHSV 387          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHSY_CATRO (Chalcone synthase OS=Catharanthus roseus GN=CHS PE=2 SV=1)

HSP 1 Score: 263.077 bits (671), Expect = 1.335e-69
Identity = 129/168 (76.79%), Postives = 142/168 (84.52%), Query Frame = -3
Query:  304 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 807
            +IVG DP   +ERPL++LVS +QT+LPDS GAIDGHLREVGLTFHLLKDVPGLISKNI K+L EAF P+GISDWNSIFWIAHPGGPAILDQV           +ATR VLSEYGNMSSACVLFILDEMRK SA +  +TTGEGL+WGVLFGFGPGLTVETVVLHSV +
Sbjct:  222 IIVGSDPIPEIERPLFELVSAAQTLLPDSHGAIDGHLREVGLTFHLLKDVPGLISKNIGKALDEAFQPLGISDWNSIFWIAHPGGPAILDQVEEKLGLKPEKLRATRHVLSEYGNMSSACVLFILDEMRKASARDGLSTTGEGLEWGVLFGFGPGLTVETVVLHSVNV 389          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHSB_SOLTU (Chalcone synthase 1B OS=Solanum tuberosum GN=CHS1B PE=2 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.743e-69
Identity = 128/166 (77.11%), Postives = 142/166 (85.54%), Query Frame = -3
Query:  310 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 807
            +I+G DP   VERPL++LVS +QT++PDS+GAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF P+GISDWNS+FWIAHPGGPAILDQV           +ATR+VLS YGNMSSACVLFILDEMRK S +E   TTGEGL+WGVLFGFGPGLTVETVVLHSV
Sbjct:  222 IIMGSDPIIGVERPLFELVSAAQTLVPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLLEAFQPLGISDWNSLFWIAHPGGPAILDQVELKLGLKQEKLRATREVLSNYGNMSSACVLFILDEMRKASTKEGLGTTGEGLEWGVLFGFGPGLTVETVVLHSV 387          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHS3_CAMSI (Chalcone synthase 3 OS=Camellia sinensis GN=CHS3 PE=2 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 1.743e-69
Identity = 129/166 (77.71%), Postives = 141/166 (84.94%), Query Frame = -3
Query:  310 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 807
            +I+G DP   VE+PL++LVS +QTILP SDGAIDGHLREVGLTFHLLKDVP LIS N+EKSL EAF P+GISDWNS+FWIAHPGGPAILDQV           +ATR VLSEYGNMSSACVLFILDEMRKKSAEE   TTGEGL+WGVLFGFGPGLTVETVVLHS+
Sbjct:  222 IIIGSDPIPEVEKPLFELVSAAQTILPSSDGAIDGHLREVGLTFHLLKDVPRLISMNVEKSLVEAFQPLGISDWNSLFWIAHPGGPAILDQVELKLGLKEEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEEGLKTTGEGLEWGVLFGFGPGLTVETVVLHSL 387          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHSB_PEA (Chalcone synthase 1B OS=Pisum sativum GN=CHS-1B PE=3 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 2.277e-69
Identity = 131/166 (78.92%), Postives = 143/166 (86.14%), Query Frame = -3
Query:  310 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 807
            VIVG DP   VE+PL++LV T+QTILPDS+GAIDGHLREVGLTFHLLKDVPGLISKNIEK+L EAF P+GISD+NS+FWIAHPGGPAILDQV           +ATR VLSEYGNMSSACVLFILDEMR+KS EE   TTGEGL+WGVLFGFGPGLTVETVVLHSV
Sbjct:  222 VIVGSDPLPQVEKPLFELVWTAQTILPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKALVEAFQPLGISDYNSLFWIAHPGGPAILDQVEAKLSLKQRKMQATRHVLSEYGNMSSACVLFILDEMRRKSKEEQLGTTGEGLEWGVLFGFGPGLTVETVVLHSV 387          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHSA_SOLTU (Chalcone synthase 1A OS=Solanum tuberosum GN=CHS1A PE=2 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 2.277e-69
Identity = 128/166 (77.11%), Postives = 141/166 (84.94%), Query Frame = -3
Query:  310 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 807
            +I+G DP   VERPL++LVS +QT++PDS+GAIDGHLREVGLTFHLLKDVPGLISKNIEKSL EAF P+GISDWNS+FWIAHPGGPAILDQV           +ATR+VLS YGNMSSACVLFILDEMRK S  E   TTGEGL+WGVLFGFGPGLTVETVVLHSV
Sbjct:  222 IIMGSDPIIGVERPLFELVSAAQTLVPDSEGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLLEAFQPLGISDWNSLFWIAHPGGPAILDQVELKLGLKQEKLRATREVLSNYGNMSSACVLFILDEMRKASTNEGLGTTGEGLEWGVLFGFGPGLTVETVVLHSV 387          
The following BLAST results are available for this feature:
BLAST of CX043528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHSE_IPOPU3.512e-7078.31Chalcone synthase E OS=Ipomoea purpurea GN=CHSE PE... [more]
CHSE_IPONI3.512e-7078.31Chalcone synthase E OS=Ipomoea nil GN=CHSE PE=2 SV... [more]
CHSY_HYDMC5.991e-7078.31Chalcone synthase OS=Hydrangea macrophylla GN=CHS ... [more]
CHSY_DIAMO1.022e-6973.81Chalcone synthase OS=Dianthus monspessulanus GN=CH... [more]
CHS1_SOLLC1.022e-6977.11Chalcone synthase 1 OS=Solanum lycopersicum GN=CHS... [more]
CHSY_CATRO1.335e-6976.79Chalcone synthase OS=Catharanthus roseus GN=CHS PE... [more]
CHSB_SOLTU1.743e-6977.11Chalcone synthase 1B OS=Solanum tuberosum GN=CHS1B... [more]
CHS3_CAMSI1.743e-6977.71Chalcone synthase 3 OS=Camellia sinensis GN=CHS3 P... [more]
CHSB_PEA2.277e-6978.92Chalcone synthase 1B OS=Pisum sativum GN=CHS-1B PE... [more]
CHSA_SOLTU2.277e-6977.11Chalcone synthase 1A OS=Solanum tuberosum GN=CHS1A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11F09_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11F09-K17-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043528 ID=CX043528; Name=CX043528; organism=Citrus sinensis; type=EST; length=809bp
CCCCCCCTTTTTACTTTATAACGATGATTTTTTTTCCCACATTAAAATCA
TGACCTTTGGGCATTTACAGATTCAGGACATCCTGTTACAAATTTATTGC
TTTCTCAAATTCCCAAGAATTTATGCATAAACACAAAGCGTTGCCCAGGT
TTGATGACGTCATAAGAGAAAAGGTACGATGCCTTAAATTCAATTGACAA
AACTAAACCTTCACACGATCAACCAATAATTCAAGAGTGAAAGCATACAA
CATAAAGTTACTGAACTACTAAACATACTGATGGAGTTCTCACTTCAAGC
TTTGATGGGGACACTGTGCAGCACAACGGTCTCGACGGTGAGCCCCGGCC
CGAACCCGAACAGCACACCCCAATCTAGCCCTTCGCCGGTGGTGGCTTTC
GCTTCCTCAGCAGACTTCTTTCTCATCTCGTCAAGGATGAACAGGACACA
AGCGCTTGACATGTTACCGTACTCACTCAACACTTGACGTGTGGCCTTCA
GCTTCTCCTCTTTGAGGCCGAGTTTAGACTCCACTTGGTCCAGAATTGCG
GGCCCACCGGGGTGAGCGATCCAGAATATCGAGTTCCAGTCGCTGATGCC
AACCGGGGCGAACGCTTCCGACAGGCTTTTCTCTATATTCTTTGAGATCA
AGCCGGGGACGTCTTTAAGCAAATGGAAAGTGAGACCGACTTCGCGCAAG
TGTCCGTCAATTGCACCGTCAGAGTCAGGGAGGATCGTCTGCGAAGTCGA
CACAAGCTGATACAACGGACGCTCGACCGACGTGTCAGGATCGGGACCCA
CGATCACAG
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