CX043528

Overview
NameCX043528
Unique NameCX043528
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHS3_TRISU (Chalcone synthase 3 OS=Trifolium subterraneum GN=CHS3 PE=2 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 3.635e-67
Identity = 124/168 (73.81%), Postives = 142/168 (84.52%), Query Frame = -3
Query:  304 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 807
            +IVG DP   +E+P++ +V T+QTI PDS+GAIDGHLRE GLTFHLLKDVPG++SKNI+K+L EAF P+GISD+NSIFWIAHPGGPAILDQV           KATR+VLSEYGNMSSACVLFILDEMRKKS ++   TTGEGLDWGVLFGFGPGLT+ETVVLHSV I
Sbjct:  222 LIVGSDPVPEIEKPIFVMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNIDKALVEAFQPLGISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMKATREVLSEYGNMSSACVLFILDEMRKKSTKDGLKTTGEGLDWGVLFGFGPGLTIETVVLHSVAI 389          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHSY_PUELO (Chalcone synthase OS=Pueraria lobata GN=CHS PE=2 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 4.747e-67
Identity = 127/168 (75.60%), Postives = 141/168 (83.93%), Query Frame = -3
Query:  304 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 807
            VIVG DP   VE+PLY+LV T+QTI PDS+GAIDGHLREVGLTFHLLKDVPG++SKNI+K+L EAF P+ ISD+NSIFWIAHPGGPAILDQV           KATR VLS+YGNMSSACVLFILDEMR+KSAE    TTGEGL+WGVLFGFGPGLT+ETVVL SV I
Sbjct:  222 VIVGSDPIPQVEKPLYELVWTAQTIAPDSEGAIDGHLREVGLTFHLLKDVPGIVSKNIDKALFEAFNPLNISDYNSIFWIAHPGGPAILDQVEQKLGLKPEKMKATRDVLSDYGNMSSACVLFILDEMRRKSAENGLKTTGEGLEWGVLFGFGPGLTIETVVLRSVAI 389          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHSY_PHAVU (Chalcone synthase 17 OS=Phaseolus vulgaris GN=CHS17 PE=2 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 4.747e-67
Identity = 126/168 (75.00%), Postives = 141/168 (83.93%), Query Frame = -3
Query:  304 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 807
            VIVG DP   +E+PL++LV T+QTI PDSDGAIDGHLREVGLTFHLLKDVPG++SKNI K+L EAF P+ ISD+NSIFWIAHPGGPAILDQV           KATR VLS+YGNMS ACVLFILDEMR+KSAE+   TTGEGL+WGVLFGFGPGLT+ETVVLHSV I
Sbjct:  222 VIVGSDPIPQIEKPLFELVWTAQTIAPDSDGAIDGHLREVGLTFHLLKDVPGIVSKNIGKALFEAFNPLNISDYNSIFWIAHPGGPAILDQVEQKLGLKPEKMKATRDVLSDYGNMSGACVLFILDEMRRKSAEKGLKTTGEGLEWGVLFGFGPGLTIETVVLHSVAI 389          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHS6_TRISU (Chalcone synthase 6 OS=Trifolium subterraneum GN=CHS6 PE=2 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 4.747e-67
Identity = 124/168 (73.81%), Postives = 141/168 (83.93%), Query Frame = -3
Query:  304 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 807
            +IVG DP   +E+P++++V T+QTI PDS+GAIDGHLRE GLTFHLLKDVPG++SKNI+K+L EAF P+ ISD+NSIFWIAHPGGPAILDQV           KATR VLSEYGNMSSACVLFILDEMRKKSA+    TTGEGLDWGVLFGFGPGLT+ETVVLHSV I
Sbjct:  222 LIVGSDPVPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNIDKALVEAFQPLNISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMKATRDVLSEYGNMSSACVLFILDEMRKKSAQNGLKTTGEGLDWGVLFGFGPGLTIETVVLHSVAI 389          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHS5_TRISU (Chalcone synthase 5 OS=Trifolium subterraneum GN=CHS5 PE=2 SV=1)

HSP 1 Score: 254.603 bits (649), Expect = 4.747e-67
Identity = 124/168 (73.81%), Postives = 141/168 (83.93%), Query Frame = -3
Query:  304 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 807
            +IVG DP   +E+P++++V T+QTI PDS+GAIDGHLRE GLTFHLLKDVPG++SKNI+K+L EAF P+ ISD+NSIFWIAHPGGPAILDQV           KATR VLSEYGNMSSACVLFILDEMRKKSA+    TTGEGLDWGVLFGFGPGLT+ETVVLHSV I
Sbjct:  222 LIVGSDPVPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNIDKALVEAFQPLNISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMKATRDVLSEYGNMSSACVLFILDEMRKKSAQNGLKTTGEGLDWGVLFGFGPGLTIETVVLHSVAI 389          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHSA_PEA (Chalcone synthase 1A OS=Pisum sativum GN=CHS-1A PE=3 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 8.098e-67
Identity = 125/166 (75.30%), Postives = 141/166 (84.94%), Query Frame = -3
Query:  310 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSV 807
            VIVG DP   VE+PL++LV T+QTI+PDS+GAIDGHLRE GLTFHLLKDVP L+SKNIEK+L EAF P+ ISD+NSIFWIAHPGGPAILDQV           +ATR VLSEYGNMSSACVLFILDEMR+KS E+  ATTGEGL+WGVLFGFGPGLTVETV+LHS+
Sbjct:  222 VIVGSDPLPDVEKPLFELVWTAQTIVPDSEGAIDGHLREAGLTFHLLKDVPSLVSKNIEKALVEAFQPLNISDYNSIFWIAHPGGPAILDQVEAKLGLKQRKMQATRHVLSEYGNMSSACVLFILDEMRRKSKEDGLATTGEGLEWGVLFGFGPGLTVETVLLHSM 387          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHS2_TRISU (Chalcone synthase 2 OS=Trifolium subterraneum GN=CHS2 PE=3 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 8.098e-67
Identity = 123/168 (73.21%), Postives = 142/168 (84.52%), Query Frame = -3
Query:  304 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 807
            +IVG DP   +E+P++++V T+QTI PDS+GAIDGHLRE GLTFHLLKDVPG++SKNI+K+L EAF P+ ISD+NSIFWIAHPGGPAILDQV           KATR+VLSEYGNMSSACVLFILDEMRKKSA+    TTGEGL+WGVLFGFGPGLT+ETVVLHSV I
Sbjct:  222 LIVGSDPVPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNIDKALVEAFQPLNISDYNSIFWIAHPGGPAILDQVEQKLALKPEKMKATREVLSEYGNMSSACVLFILDEMRKKSAQNGLKTTGEGLEWGVLFGFGPGLTIETVVLHSVAI 389          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHS1_TRISU (Chalcone synthase 1 OS=Trifolium subterraneum GN=CHS1 PE=3 SV=1)

HSP 1 Score: 253.832 bits (647), Expect = 8.098e-67
Identity = 123/168 (73.21%), Postives = 142/168 (84.52%), Query Frame = -3
Query:  304 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 807
            +IVG DP   +E+P++++V T+QTI PDS+GAIDGHLRE GLTFHLLKDVPG++SKNI+K+L EAF P+ ISD+NSIFWIAHPGGPAILDQV           KATR VLSEYGNMSSACVLFILDEMRKKSA++   TTGEGL+WGVLFGFGPGLT+ETVVLHSV I
Sbjct:  222 LIVGSDPVPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNIDKALVEAFQPLNISDYNSIFWIAHPGGPAILDQVEQKLSLKPEKMKATRDVLSEYGNMSSACVLFILDEMRKKSAQDGLKTTGEGLEWGVLFGFGPGLTIETVVLHSVAI 389          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHS6_PEA (Chalcone synthase 6 OS=Pisum sativum GN=CHS6 PE=2 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 1.058e-66
Identity = 123/168 (73.21%), Postives = 141/168 (83.93%), Query Frame = -3
Query:  304 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPI 807
            +IVG DP   +E+P++++V T+QTI PDS+GAIDGHLRE GLTFHLLKDVPG++SKNI K+L EAF P+ I D+NSIFWIAHPGGPAILDQV           KATR+VLSEYGNMSSACVLFILDEMRKKSA++   TTGEGLDWGVLFGFGPGLT+ETVVLHSV I
Sbjct:  222 LIVGSDPLPEIEKPIFEMVWTAQTIAPDSEGAIDGHLREAGLTFHLLKDVPGIVSKNINKALVEAFQPLNIDDYNSIFWIAHPGGPAILDQVEEKLGLKPEKMKATREVLSEYGNMSSACVLFILDEMRKKSAQQGLKTTGEGLDWGVLFGFGPGLTIETVVLHSVAI 389          
BLAST of CX043528 vs. ExPASy Swiss-Prot
Match: CHS4_IPOBA (Chalcone synthase LF4 OS=Ipomoea batatas GN=CHS-LF4 PE=2 SV=1)

HSP 1 Score: 253.447 bits (646), Expect = 1.058e-66
Identity = 126/169 (74.56%), Postives = 138/169 (81.66%), Query Frame = -3
Query:  301 VIVGPDPDTSVERPLYQLVSTSQTILPDSDGAIDGHLREVGLTFHLLKDVPGLISKNIEKSLSEAFAPVGISDWNSIFWIAHPGGPAILDQVXXXXXXXXXXXKATRQVLSEYGNMSSACVLFILDEMRKKSAEEAKATTGEGLDWGVLFGFGPGLTVETVVLHSVPIK 807
            VIVG DP T  E+PL+QLVS +Q + PDS GAIDGHLREVGLTFHLLKDVP ++S NIEK L EAF P+GISDWNS+FWIAHPGGPAILDQV           +ATR VLSEYGNMSSACVLFILDEMRK S+     TTGEGL+WGVLFGFGPGLT+ETVVLHSVPIK
Sbjct:  222 VIVGADP-TPAEKPLFQLVSAAQNLAPDSCGAIDGHLREVGLTFHLLKDVPSVVSNNIEKCLFEAFNPLGISDWNSVFWIAHPGGPAILDQVEDKLGLKPEKLRATRHVLSEYGNMSSACVLFILDEMRKASSNAGLGTTGEGLEWGVLFGFGPGLTIETVVLHSVPIK 389          
The following BLAST results are available for this feature:
BLAST of CX043528 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
CHS3_TRISU3.635e-6773.81Chalcone synthase 3 OS=Trifolium subterraneum GN=C... [more]
CHSY_PUELO4.747e-6775.60Chalcone synthase OS=Pueraria lobata GN=CHS PE=2 S... [more]
CHSY_PHAVU4.747e-6775.00Chalcone synthase 17 OS=Phaseolus vulgaris GN=CHS1... [more]
CHS6_TRISU4.747e-6773.81Chalcone synthase 6 OS=Trifolium subterraneum GN=C... [more]
CHS5_TRISU4.747e-6773.81Chalcone synthase 5 OS=Trifolium subterraneum GN=C... [more]
CHSA_PEA8.098e-6775.30Chalcone synthase 1A OS=Pisum sativum GN=CHS-1A PE... [more]
CHS2_TRISU8.098e-6773.21Chalcone synthase 2 OS=Trifolium subterraneum GN=C... [more]
CHS1_TRISU8.098e-6773.21Chalcone synthase 1 OS=Trifolium subterraneum GN=C... [more]
CHS6_PEA1.058e-6673.21Chalcone synthase 6 OS=Pisum sativum GN=CHS6 PE=2 ... [more]
CHS4_IPOBA1.058e-6674.56Chalcone synthase LF4 OS=Ipomoea batatas GN=CHS-LF... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11F09_b Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11F09-K17-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043528 ID=CX043528; Name=CX043528; organism=Citrus sinensis; type=EST; length=809bp
CCCCCCCTTTTTACTTTATAACGATGATTTTTTTTCCCACATTAAAATCA
TGACCTTTGGGCATTTACAGATTCAGGACATCCTGTTACAAATTTATTGC
TTTCTCAAATTCCCAAGAATTTATGCATAAACACAAAGCGTTGCCCAGGT
TTGATGACGTCATAAGAGAAAAGGTACGATGCCTTAAATTCAATTGACAA
AACTAAACCTTCACACGATCAACCAATAATTCAAGAGTGAAAGCATACAA
CATAAAGTTACTGAACTACTAAACATACTGATGGAGTTCTCACTTCAAGC
TTTGATGGGGACACTGTGCAGCACAACGGTCTCGACGGTGAGCCCCGGCC
CGAACCCGAACAGCACACCCCAATCTAGCCCTTCGCCGGTGGTGGCTTTC
GCTTCCTCAGCAGACTTCTTTCTCATCTCGTCAAGGATGAACAGGACACA
AGCGCTTGACATGTTACCGTACTCACTCAACACTTGACGTGTGGCCTTCA
GCTTCTCCTCTTTGAGGCCGAGTTTAGACTCCACTTGGTCCAGAATTGCG
GGCCCACCGGGGTGAGCGATCCAGAATATCGAGTTCCAGTCGCTGATGCC
AACCGGGGCGAACGCTTCCGACAGGCTTTTCTCTATATTCTTTGAGATCA
AGCCGGGGACGTCTTTAAGCAAATGGAAAGTGAGACCGACTTCGCGCAAG
TGTCCGTCAATTGCACCGTCAGAGTCAGGGAGGATCGTCTGCGAAGTCGA
CACAAGCTGATACAACGGACGCTCGACCGACGTGTCAGGATCGGGACCCA
CGATCACAG
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