CX043513
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043513 vs. ExPASy Swiss-Prot
Match: HS176_ARATH (17.6 kDa class II heat shock protein OS=Arabidopsis thaliana GN=HSP17.6 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 4.392e-12 Identity = 42/115 (36.52%), Postives = 60/115 (52.17%), Query Frame = 2 Query: 359 EASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIE-KEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQI 700 +A A T D E P A+ F D+PG+ L +SG+R E KE++ + R+ER G F R+F+LPENA +D+I A +GVL VTV K + + IQ+ Sbjct: 38 DAKAMAATPADVIEHPNAYAFVVDMPGIKGDEIKVQVENDNVLVVSGERQRENKENEGVKYVRMERRMGKFMRKFQLPENADLDKISAVCHDGVLKVTVQKLPPPEPKKPKTIQV 152
BLAST of CX043513 vs. ExPASy Swiss-Prot
Match: HSP22_IPONI (18.8 kDa class II heat shock protein OS=Ipomoea nil GN=SHSP-2 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.785e-12 Identity = 40/116 (34.48%), Postives = 62/116 (53.45%), Query Frame = 2 Query: 359 EASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSD--TWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQI 700 +A A T D KE P ++VF AD+PG+ L +SG+R ++D+ D + R+ER G F R+F LPENA ++ I A ++GVL VTV K + + +++ Sbjct: 49 DAKAMAATPADVKEYPNSYVFIADMPGVKAAEIKVQVEDDNVLVVSGERTEREKDEKDGVKYLRMERRVGKFMRKFVLPENANVEAINAVYQDGVLQVTVEKLPPPEPKKPKTVEV 164
BLAST of CX043513 vs. ExPASy Swiss-Prot
Match: HSP18_ORYSJ (18.0 kDa class II heat shock protein OS=Oryza sativa subsp. japonica GN=HSP18.0 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.785e-12 Identity = 42/118 (35.59%), Postives = 63/118 (53.39%), Query Frame = 2 Query: 359 EASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNI----EKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQI 700 +A A T D K+ P A+ F D+PGL L ISG+R E++++S + R+ER G F R+F LP+NA +D+I A ++GVLTVTV K + + I++ Sbjct: 46 DARAMAATPADVKDLPGAYAFVVDMPGLKSSDIKVQVEEERLLVISGERRRGGGEEEKEESCKYLRMERRMGKFMRKFVLPDNADVDKISAVCQDGVLTVTVEKLPPPEPKKPKTIEV 163
BLAST of CX043513 vs. ExPASy Swiss-Prot
Match: HS178_ORYSJ (17.8 kDa heat shock protein OS=Oryza sativa subsp. japonica GN=HSP17.8 PE=2 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 3.718e-11 Identity = 43/116 (37.07%), Postives = 62/116 (53.45%), Query Frame = 2 Query: 386 VDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQI--------------SGQRNIEKEDKSD--TWHRVERSSGMFSR---RFRLPENAKMDRIKASMENGVLTVTVPKAEEAKK 676 +DW+ETP AHVF+ DLPGL L++ +G+ + E+E+++D WH ER++G +FRLPE+A D A M +GVLTVTVPK + K+ Sbjct: 29 MDWRETPVAHVFEMDLPGLAKDQVAVEVVDGHILRVRAGGEHEDANNAAKAGKASGEEEEENDGVRWHCRERAAGRRRAAVTQFRLPEDAAADEASARMADGVLTVTVPKRKGKKR 144
BLAST of CX043513 vs. ExPASy Swiss-Prot
Match: HSP23_MAIZE (17.0 kDa class II heat shock protein OS=Zea mays GN=HSP18 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.284e-11 Identity = 41/114 (35.96%), Postives = 59/114 (51.75%), Query Frame = 2 Query: 359 EASAFVNTRVDWKETPEAHVFKADLPGLXXXXXXXXXXXXXXLQISGQRNIEKEDKSDTWHRVERSSGMFSRRFRLPENAKMDRIKASMENGVLTVTVPKAEEAKKANVRAIQI 700 +A A T D KE A+ F D+PGL L ISG+R E+ + + + R+ER G F R+F LP+NA +D++ A +GVLTVTV K + + I+I Sbjct: 39 DARAMAATPADVKELAGAYAFVVDMPGLSTGDIRVQVEDERVLVISGERRREEREDAK-YLRMERRMGKFMRKFVLPDNADVDKVAAVCRDGVLTVTVEKLPPPEPKKPKTIEI 151 The following BLAST results are available for this feature:
BLAST of CX043513 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043513 ID=CX043513; Name=CX043513; organism=Citrus sinensis; type=EST; length=812bpback to top |