CX043497
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043497 vs. ExPASy Swiss-Prot
Match: RAB5B_PONAB (Ras-related protein Rab-5B OS=Pongo abelii GN=RAB5B PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.086e-29 Identity = 71/173 (41.04%), Postives = 104/173 (60.12%), Query Frame = -1 Query: 286 KVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNEPQ 804 K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ V +D +IWDTAGQER+ SL +YRGA ++VYD+ ++F W +E QASPS + GNK D+ N R+V ++A+A+ A ++ + ETSAK NV F IAK K+EPQ Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPS----IVIALAGNKADL--ANKRMVEYEEAQAY-ADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQ 187
BLAST of CX043497 vs. ExPASy Swiss-Prot
Match: RAB5B_MOUSE (Ras-related protein Rab-5B OS=Mus musculus GN=Rab5b PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.086e-29 Identity = 71/173 (41.04%), Postives = 104/173 (60.12%), Query Frame = -1 Query: 286 KVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNEPQ 804 K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ V +D +IWDTAGQER+ SL +YRGA ++VYD+ ++F W +E QASPS + GNK D+ N R+V ++A+A+ A ++ + ETSAK NV F IAK K+EPQ Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPS----IVIALAGNKADL--ANKRMVEYEEAQAY-ADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQ 187
BLAST of CX043497 vs. ExPASy Swiss-Prot
Match: RAB5B_HUMAN (Ras-related protein Rab-5B OS=Homo sapiens GN=RAB5B PE=1 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.086e-29 Identity = 71/173 (41.04%), Postives = 104/173 (60.12%), Query Frame = -1 Query: 286 KVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNEPQ 804 K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ V +D +IWDTAGQER+ SL +YRGA ++VYD+ ++F W +E QASPS + GNK D+ N R+V ++A+A+ A ++ + ETSAK NV F IAK K+EPQ Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPS----IVIALAGNKADL--ANKRMVEYEEAQAY-ADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQ 187
BLAST of CX043497 vs. ExPASy Swiss-Prot
Match: RAA2A_ARATH (Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 3.086e-29 Identity = 68/165 (41.21%), Postives = 107/165 (64.85%), Query Frame = -1 Query: 316 LLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECI 810 L KV+++GDSGVGK++L++++ +F + K+TIG +F T+ +Q E R QIWDTAGQER++++ A+YRGA +LVYDV +F+N++ W +E A N +++GNKTD+ + R V+ + A+++ A K + + ETSA E NVE AF+ I Sbjct: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHAD----SNIVIMLIGNKTDLK--HLRAVATEDAQSY-AEKEGLSFIETSALEALNVEKAFQTI 169
BLAST of CX043497 vs. ExPASy Swiss-Prot
Match: RAB8A_BOVIN (Ras-related protein Rab-8A OS=Bos taurus GN=RAB8A PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 4.031e-29 Identity = 80/207 (38.65%), Postives = 119/207 (57.49%), Query Frame = -1 Query: 214 LLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIA--------KNALKNEPQEEDYLPDTIDVGGGQQQRSSGCEC 810 L K++++GDSGVGKT ++ ++ F++ + +TIG DF + ++ + + LQIWDTAGQERF+++ A+YRGA +LVYD+ KSFDN+ NW AS +D E ++LGNK DV+ + R VS+++ + G I + ETSAK NVE AF +A K N PQ + + + QQ+RSS C Sbjct: 8 LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHAS-ADVEK---MILGNKCDVN--DKRQVSKERGEKLALDYG-IKFMETSAKANINVENAFYTLARDIKAKMDKKLEGNSPQGSN---QGVKITPDQQKRSSFFRC 204
BLAST of CX043497 vs. ExPASy Swiss-Prot
Match: RAB10_DISOM (Ras-related protein Rab-10 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 128.642 bits (322), Expect = 4.031e-29 Identity = 76/195 (38.97%), Postives = 118/195 (60.51%), Query Frame = -1 Query: 244 MLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNEPQEEDYLPDTIDV-----GGG 813 +L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K V+ + LQIWDTAGQERF ++ ++YRGA +LVYD+ KSF+N++ W A+ E+ ++LGNK D++ + RVV + K + A + I +FETSAK N+E AF +A++ L+ P +E PD +V GGG Sbjct: 8 LLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELHGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISKWLRNIDEHAN----EDVERMLLGNKCDME--DKRVVLKSKGEQ-IAREHAIRFFETSAKANINIEKAFLTLAEDILQKTPVKE---PDRENVDISTTGGG 192
BLAST of CX043497 vs. ExPASy Swiss-Prot
Match: YPT3_SCHPO (GTP-binding protein ypt3 OS=Schizosaccharomyces pombe GN=ypt3 PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.264e-29 Identity = 64/165 (38.79%), Postives = 108/165 (65.45%), Query Frame = -1 Query: 316 LLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECI 810 L K +++GDSGVGK++L+ ++ +F+ + K+TIG +F T+ + +++ QIWDTAGQER++++ A+YRGA ++VYD+ SFDN+ W +E A N +++GNKTD+ + R VS ++A+A+ A++ N+ + ETSA + NVE AF+ + Sbjct: 10 LFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHAD----SNIVIMLVGNKTDL--LHLRAVSTEEAQAF-AAENNLSFIETSAMDASNVEEAFQTV 167
BLAST of CX043497 vs. ExPASy Swiss-Prot
Match: RAB8A_PONAB (Ras-related protein Rab-8A OS=Pongo abelii GN=RAB8A PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.264e-29 Identity = 80/207 (38.65%), Postives = 119/207 (57.49%), Query Frame = -1 Query: 214 LLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIA--------KNALKNEPQEEDYLPDTIDVGGGQQQRSSGCEC 810 L K++++GDSGVGKT ++ ++ F++ + +TIG DF + ++ + + LQIWDTAGQERF+++ A+YRGA +LVYD+ KSFDN+ NW AS +D E ++LGNK DV+ + R VS+++ + G I + ETSAK NVE AF +A K N PQ + + + QQ+RSS C Sbjct: 8 LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHAS-ADVEK---MILGNKRDVN--DKRQVSKERGEKLALDYG-IKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGSN---QGVKITPDQQKRSSFFRC 204
BLAST of CX043497 vs. ExPASy Swiss-Prot
Match: RAB8A_MACFA (Ras-related protein Rab-8A OS=Macaca fascicularis GN=RAB8A PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.264e-29 Identity = 80/207 (38.65%), Postives = 119/207 (57.49%), Query Frame = -1 Query: 214 LLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIA--------KNALKNEPQEEDYLPDTIDVGGGQQQRSSGCEC 810 L K++++GDSGVGKT ++ ++ F++ + +TIG DF + ++ + + LQIWDTAGQERF+++ A+YRGA +LVYD+ KSFDN+ NW AS +D E ++LGNK DV+ + R VS+++ + G I + ETSAK NVE AF +A K N PQ + + + QQ+RSS C Sbjct: 8 LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHAS-ADVEK---MILGNKCDVN--DKRQVSKERGEKLALDYG-IKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGSN---QGVKITPDQQKRSSFFRC 204
BLAST of CX043497 vs. ExPASy Swiss-Prot
Match: RAB8A_HUMAN (Ras-related protein Rab-8A OS=Homo sapiens GN=RAB8A PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.264e-29 Identity = 80/207 (38.65%), Postives = 119/207 (57.49%), Query Frame = -1 Query: 214 LLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIA--------KNALKNEPQEEDYLPDTIDVGGGQQQRSSGCEC 810 L K++++GDSGVGKT ++ ++ F++ + +TIG DF + ++ + + LQIWDTAGQERF+++ A+YRGA +LVYD+ KSFDN+ NW AS +D E ++LGNK DV+ + R VS+++ + G I + ETSAK NVE AF +A K N PQ + + + QQ+RSS C Sbjct: 8 LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHAS-ADVEK---MILGNKCDVN--DKRQVSKERGEKLALDYG-IKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGSN---QGVKITPDQQKRSSFFRC 204 The following BLAST results are available for this feature:
BLAST of CX043497 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043497 ID=CX043497; Name=CX043497; organism=Citrus sinensis; type=EST; length=819bpback to top |