CX043497
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043497 vs. ExPASy Swiss-Prot
Match: RAB8A_CANFA (Ras-related protein Rab-8A OS=Canis familiaris GN=RAB8A PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.264e-29 Identity = 80/207 (38.65%), Postives = 119/207 (57.49%), Query Frame = -1 Query: 214 LLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIA--------KNALKNEPQEEDYLPDTIDVGGGQQQRSSGCEC 810 L K++++GDSGVGKT ++ ++ F++ + +TIG DF + ++ + + LQIWDTAGQERF+++ A+YRGA +LVYD+ KSFDN+ NW AS +D E ++LGNK DV+ + R VS+++ + G I + ETSAK NVE AF +A K N PQ + + + QQ+RSS C Sbjct: 8 LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHAS-ADVEK---MILGNKCDVN--DKRQVSKERGEKLALDYG-IKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGSN---QGVKITPDQQKRSSFFRC 204
BLAST of CX043497 vs. ExPASy Swiss-Prot
Match: RAB5C_CHICK (Ras-related protein Rab-5C OS=Gallus gallus GN=RAB5C PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.264e-29 Identity = 76/198 (38.38%), Postives = 107/198 (54.04%), Query Frame = -1 Query: 220 KVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNEPQEEDYLPD---TIDVGGGQQQRSSGC 804 K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ V +D +IWDTAGQER+ SL +YRGA ++VYD+ +F NW +E QASP N + GNK D+ R V + A+ + A ++ + ETSAK NV F IAK KNEPQ P +D+ Q S C Sbjct: 23 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFVRAKNWVKELQRQASP----NIVIALAGNKADL--ATKRAVDFQDAQTY-ADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAPGGPGRNRVVDLQESSQPSRSQC 213
BLAST of CX043497 vs. ExPASy Swiss-Prot
Match: ARA3_ARATH (Ras-related protein ARA-3 OS=Arabidopsis thaliana GN=ARA-3 PE=2 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.264e-29 Identity = 78/206 (37.86%), Postives = 117/206 (56.80%), Query Frame = -1 Query: 220 LLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNEPQEEDYL--PDTIDV-------GGGQQQRSSGC 810 L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + + LQIWDTAGQERF+++ A+YRGA +LVYDV SF+N+ NW AS +N +++GNK D+D + R V K +A A + I +FETSAK NVE F I ++ +K + D P TI + G GQ + S C Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS----DNVNKILVGNKADMD-ESKRAVPTAKGQA-LADEYGIKFFETSAKTNLNVEEVFFSIGRD-IKQRLSDTDSRAEPATIKISQTDQAAGAGQATQKSAC 213
BLAST of CX043497 vs. ExPASy Swiss-Prot
Match: YPTC6_CHLRE (Ras-related protein YPTC6 OS=Chlamydomonas reinhardtii GN=YPTC6 PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 6.876e-29 Identity = 66/165 (40.00%), Postives = 107/165 (64.85%), Query Frame = -1 Query: 316 LLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECI 810 L KV+++GDSGVGK++L++++ +FS + K+TIG +F T+ +Q + + QIWDTAGQER++++ A+YRGA +LVYD+ +F+N+ W +E A N +++GNK+D+ + R V + A+A+C +G + + ETSA E NVE AF+ I Sbjct: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHAD----SNIVIMLVGNKSDLK--HLRDVQTEVAQAFCEREG-LSFIETSALESTNVEKAFQQI 169
BLAST of CX043497 vs. ExPASy Swiss-Prot
Match: RB27A_PIG (Ras-related protein Rab-27A OS=Sus scrofa GN=RAB27A PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 6.876e-29 Identity = 78/219 (35.62%), Postives = 123/219 (56.16%), Query Frame = -1 Query: 214 LLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFE----------DRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNEPQ--EEDYLPDTIDVGGG--------QQQRSSGCEC 810 L+K + LGDSGVGKTS++ QY + KF++++ T+G DF K V + + LQ+WDTAGQERF+SL AF+R A +L++D+ +SF N+ NW + + A +P+ V+ GNK+D++ + RVV E++A+ A K IPYFETSA G NV A E + +K + ++ ++P+ + G +++ C C Sbjct: 9 LIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRANGPDGAIGRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENPD---IVLCGNKSDLE--DQRVVKEEEARG-LAEKYGIPYFETSAANGTNVSLAIETLLDLIMKRMERCVDKSWIPEGVVRSNGHTSADPLNEEKEKGSCGC 221
BLAST of CX043497 vs. ExPASy Swiss-Prot
Match: RB1BV_BETVU (Ras-related protein RAB1BV OS=Beta vulgaris GN=RAB1BV PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 6.876e-29 Identity = 77/204 (37.75%), Postives = 113/204 (55.39%), Query Frame = -1 Query: 220 LLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIA---KNALKNEPQEEDYLPD----TIDVGGGQQQRSSGC 810 L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + ++ + + LQIWDTAGQERF+++ A+YRGA +LVYDV SF+N+ NW AS +N +++GNK D+D + R V K +A A + I +FETSAK NVE F IA K L + ++ P D G Q S C Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHAS----DNVNKILVGNKADMD-ESKRAVPTAKGQA-LADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADSDTRQEAQPSITIKPADQSGNQAAAKSAC 212
BLAST of CX043497 vs. ExPASy Swiss-Prot
Match: RABN1_DICDI (Ras-related protein RabN1 OS=Dictyostelium discoideum GN=rabN1 PE=3 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 6.876e-29 Identity = 76/210 (36.19%), Postives = 112/210 (53.33%), Query Frame = -1 Query: 220 LKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEF----LIQASPSDPENFPFVVLGNKTDVDGGNSRVVSEKKAKAWCAS------KGNIPYFETSAKEGFNVEAAFECIAKNALK--NEPQE--EDYLPDTIDVGGGQQQRSSGC 807 LK+I++GD GKT++ N++ RKF Y D KE+ +D L WDTAGQERF SL FYR A+CCVL +D++ +SF NL+ W E L S+ + PFV++G K+D+ + +S ++ + WC + + YFETSAK N++ F I+K AL N Q+ E L T+++ +SS C Sbjct: 9 LKIIMIGDYNSGKTAIFNEFAGRKFGI-YTCPSTFDLFYKEIMIDDELVGYHFWDTAGQERFTSLNRHFYRNANCCVLCFDIHNEESFKNLDKWITELHSKCLENGLESEKLSPPFVLIGTKSDIP-RTDKSISNERIEQWCKNIEDQRIIDKVHYFETSAKNSKNIKEPFNIISKFALNYFNSMQKLNESKLNPTLEISNNNNIKSSSC 216
BLAST of CX043497 vs. ExPASy Swiss-Prot
Match: RAB5B_CHICK (Ras-related protein Rab-5B OS=Gallus gallus GN=RAB5B PE=2 SV=1) HSP 1 Score: 127.872 bits (320), Expect = 6.876e-29 Identity = 75/198 (37.88%), Postives = 111/198 (56.06%), Query Frame = -1 Query: 220 KVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIAKNALKNEPQEEDYLPDT---IDVGGGQQQRSSGC 804 K+++LG+S VGK+SL+ ++V +F ++TIGA FLT+ V +D +IWDTAGQER+ SL +YRGA ++VYD+ ++F W +E QASPS + GNK D+ + R+V ++A+A+ A ++ + ETSAK NV F IAK K+EPQ +D+ QQ S C Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASPS----IVIALAGNKADL--ASKRMVEYEEAQAY-ADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQSTSGAAGRSRGVDLHEQTQQNKSQC 212
BLAST of CX043497 vs. ExPASy Swiss-Prot
Match: RYL1_YARLI (Ras-like GTP-binding protein RYL1 OS=Yarrowia lipolytica GN=RYL1 PE=3 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.173e-28 Identity = 73/202 (36.14%), Postives = 116/202 (57.43%), Query Frame = -1 Query: 220 MLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIA----KNALKNEPQEEDYLPDTIDVGGGQQQRSSGC 813 +L+K++++GDSGVGK+ L+ ++ +F+ + TIG DF + + ++ LQ+WDTAGQERF+++ A+YRGA +LVYDV KSF+N+ NW + A+ E +++GNK D+D RVVS ++ +A A K IP+ E S+K NVE F +A K + E I++ G++ +S C Sbjct: 10 LLIKLLLIGDSGVGKSCLLLRFCEDQFTPSFITTIGIDFKIRTIDIGNQRVKLQVWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIENWYQNVQSYAN----EGVELILVGNKCDLD--EKRVVSTEQGQA-LADKFGIPFLEASSKTNINVEECFYSVATRIRDTVAKTKGNESG--SGGINIAEGEENSASKC 202
BLAST of CX043497 vs. ExPASy Swiss-Prot
Match: RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.173e-28 Identity = 65/165 (39.39%), Postives = 104/165 (63.03%), Query Frame = -1 Query: 316 LLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVLGNKTDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECI 810 L K++++GDSGVGK+++++++ +F + K+TIG +F T+ +Q E + QIWDTAGQER++++ A+YRGA +LVYD+ ++FDN+ W E A N ++ GNK+D+ + R VSE+ +A A K + + ETSA E N+E AF+ I Sbjct: 12 LFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHAD----SNIVIMMAGNKSDLK--HLRAVSEEDGQA-LAEKEGLSFLETSALEAVNIEKAFQTI 169 The following BLAST results are available for this feature:
BLAST of CX043497 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043497 ID=CX043497; Name=CX043497; organism=Citrus sinensis; type=EST; length=819bpback to top |