CX043461
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_BACST (Pyruvate dehydrogenase E1 component subunit beta OS=Bacillus stearothermophilus GN=pdhB PE=1 SV=2) HSP 1 Score: 172.555 bits (436), Expect = 2.388e-42 Identity = 91/212 (42.92%), Postives = 125/212 (58.96%), Query Frame = 3 Query: 159 LNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQL 791 + + AI AL I L+ DP R T GL FG+ RVF+TPL E GI G AIGLA G R + EIQF +++ D I + A+ RYR+G +++ +T+R+P+G H HS S E PGLKVVIP +P AKGLL+S IRD +PV+F E LYR +EVPE +Y +P+ +A++ REG DIT++ +GA + Sbjct: 4 MTMVQAITDALRIELKNDPNVLIFGEDVGVNGGVFRATEGLQAEFGEDRVFDTPLAESGIGGLAIGLALQGFRPVPEIQFFGFVYEVMDSICGQMARIRYRTGGRYHMP-ITIRSPFGGGVHTPELHSDSLEGLVAQQPGLKVVIPSTPYDAKGLLISAIRDNDPVIFLEHLKLYRSFRQEVPEGEYTIPIGKADIKREGKDITIIAYGAMV 214
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODBB_PSEPU (2-oxoisovalerate dehydrogenase subunit beta OS=Pseudomonas putida GN=bkdA2 PE=1 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 3.448e-41 Identity = 93/235 (39.57%), Postives = 133/235 (56.60%), Query Frame = 3 Query: 156 SLNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVE----------------EVPEDDYMLPLSEAEVIREGSDITLVGWGAQLSIMEQA 809 ++ + A+ A+ + LE D RCT GL ++GKSRVF+ P+ E GIVG A+G+ A G R + EIQFADY +PA DQIV+E A+ RYRS +F LT+R P G +GG HSQSPEA F V GL+ V+P +P AKGLL++ I +PV+F EPK LY + VP+ Y +PL +A + R G+D++++ +G + + + A Sbjct: 5 TMTMIQALRSAMDVMLERDDNVVVYGQDVGYFGGVFRCTEGLQTKYGKSRVFDAPISESGIVGTAVGMGAYGLRPVVEIQFADYFYPASDQIVSEMARLRYRSAGEF-IAPLTLRMPCGGGIYGGQTHSQSPEAMFTQVCGLRTVMPSNPYDAKGLLIASIECDDPVIFLEPKRLYNGPFDGHHDRPVTPWSKHPHSAVPDGYYTVPLDKAAITRPGNDVSVLTYGTTVYVAQVA 238
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_BACSU (Pyruvate dehydrogenase E1 component subunit beta OS=Bacillus subtilis GN=pdhB PE=3 SV=2) HSP 1 Score: 159.458 bits (402), Expect = 2.092e-38 Identity = 85/212 (40.09%), Postives = 122/212 (57.55%), Query Frame = 3 Query: 159 LNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQL 791 + + AI AL L+ D R T GL FG+ RVF+TPL E GI G A+GL G R + EIQF +++ D + + A+ RYRSG ++ +T+R+P+G H H+ S E PG+KVVIP +P AKGLL+S IRD +PVVF E LYR +EVPE++Y + L +A+V REG+D++++ +GA + Sbjct: 4 MTMIQAITDALRTELKNDENVLVFGEDVGVNGGVFRATEGLQKEFGEDRVFDTPLAESGIGGLALGLGLNGFRPVMEIQFFGFVYEVMDSVSGQMARMRYRSGGRWT-SPVTIRSPFGGGVHTPELHADSLEGLVAQQPGIKVVIPSTPYDAKGLLISAIRDNDPVVFLEHMKLYRSFRQEVPEEEYTIELGKADVKREGTDLSIITYGAMV 214
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_STAES (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pdhB PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 7.949e-38 Identity = 86/212 (40.57%), Postives = 120/212 (56.60%), Query Frame = 3 Query: 159 LNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQL 791 + + AIN AL L+ D R T GL FG+ RVF+TPL E GI G A+GLA G R + EIQF +++ FD++ + A+ R+RSG +T+R P+G H H+ + E PGLKVVIP P AKGLL+S I+ +PVV+ E LYR EEVPE++Y + + +A V +EG+DITL+ +GA + Sbjct: 4 MTMVQAINDALKSELKRDEDVLVFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLALGLAVTGFRPVMEIQFLGFVYEVFDEVAGQIARTRFRSGGT-KPAPVTIRTPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIQSNDPVVYLEHMKLYRSFREEVPEEEYKIDIGKANVKKEGNDITLISYGAMV 214
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_STAEQ (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pdhB PE=3 SV=1) HSP 1 Score: 157.532 bits (397), Expect = 7.949e-38 Identity = 86/212 (40.57%), Postives = 120/212 (56.60%), Query Frame = 3 Query: 159 LNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQL 791 + + AIN AL L+ D R T GL FG+ RVF+TPL E GI G A+GLA G R + EIQF +++ FD++ + A+ R+RSG +T+R P+G H H+ + E PGLKVVIP P AKGLL+S I+ +PVV+ E LYR EEVPE++Y + + +A V +EG+DITL+ +GA + Sbjct: 4 MTMVQAINDALKSELKRDEDVLVFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLALGLAVTGFRPVMEIQFLGFVYEVFDEVAGQIARTRFRSGGT-KPAPVTIRTPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIQSNDPVVYLEHMKLYRSFREEVPEEEYKIDIGKANVKKEGNDITLISYGAMV 214
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_STAAW (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain MW2) GN=pdhB PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.038e-37 Identity = 86/212 (40.57%), Postives = 120/212 (56.60%), Query Frame = 3 Query: 159 LNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQL 791 + + AIN AL L+ D R T GL FG+ RVF+TPL E GI G A+GLA G R + E+QF ++F FD I + A+ R+RSG +T+R+P+G H H+ + E PGLKVVIP P AKGLL+S IR +PVV+ E LYR EEVPE++Y + + +A V +EG+DI+++ +GA + Sbjct: 4 MTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGT-KTAPVTIRSPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFREEVPEEEYTIDIGKANVKKEGNDISIITYGAMV 214
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_STAAU (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus GN=pdhB PE=1 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.038e-37 Identity = 86/212 (40.57%), Postives = 120/212 (56.60%), Query Frame = 3 Query: 159 LNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQL 791 + + AIN AL L+ D R T GL FG+ RVF+TPL E GI G A+GLA G R + E+QF ++F FD I + A+ R+RSG +T+R+P+G H H+ + E PGLKVVIP P AKGLL+S IR +PVV+ E LYR EEVPE++Y + + +A V +EG+DI+++ +GA + Sbjct: 4 MTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGT-KTAPVTIRSPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFREEVPEEEYTIDIGKANVKKEGNDISIITYGAMV 214
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_STAAS (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain MSSA476) GN=pdhB PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.038e-37 Identity = 86/212 (40.57%), Postives = 120/212 (56.60%), Query Frame = 3 Query: 159 LNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQL 791 + + AIN AL L+ D R T GL FG+ RVF+TPL E GI G A+GLA G R + E+QF ++F FD I + A+ R+RSG +T+R+P+G H H+ + E PGLKVVIP P AKGLL+S IR +PVV+ E LYR EEVPE++Y + + +A V +EG+DI+++ +GA + Sbjct: 4 MTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGT-KTAPVTIRSPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFREEVPEEEYTIDIGKANVKKEGNDISIITYGAMV 214
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_STAAR (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain MRSA252) GN=pdhB PE=3 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.038e-37 Identity = 86/212 (40.57%), Postives = 120/212 (56.60%), Query Frame = 3 Query: 159 LNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQL 791 + + AIN AL L+ D R T GL FG+ RVF+TPL E GI G A+GLA G R + E+QF ++F FD I + A+ R+RSG +T+R+P+G H H+ + E PGLKVVIP P AKGLL+S IR +PVV+ E LYR EEVPE++Y + + +A V +EG+DI+++ +GA + Sbjct: 4 MTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGT-KTAPVTIRSPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFREEVPEEEYTIDIGKANVKKEGNDISIITYGAMV 214
BLAST of CX043461 vs. ExPASy Swiss-Prot
Match: ODPB_STAAN (Pyruvate dehydrogenase E1 component subunit beta OS=Staphylococcus aureus (strain N315) GN=pdhB PE=1 SV=1) HSP 1 Score: 157.147 bits (396), Expect = 1.038e-37 Identity = 86/212 (40.57%), Postives = 120/212 (56.60%), Query Frame = 3 Query: 159 LNLYSAINQALHIALETDPRAYXXXXXXXXXXXX-RCTTGLADRFGKSRVFNTPLCEQGIVGFAIGLAAMGNRAIAEIQFADYIFPAFDQIVNEAAKFRYRSGNQFNCGGLTVRAPYGAVGHGGHYHSQSPEAFFCHVPGLKVVIPRSPRQAKGLLLSCIRDPNPVVFFEPKWLYRLSVEEVPEDDYMLPLSEAEVIREGSDITLVGWGAQL 791 + + AIN AL L+ D R T GL FG+ RVF+TPL E GI G A+GLA G R + E+QF ++F FD I + A+ R+RSG +T+R+P+G H H+ + E PGLKVVIP P AKGLL+S IR +PVV+ E LYR EEVPE++Y + + +A V +EG+DI+++ +GA + Sbjct: 4 MTMVQAINDALKTELKNDQDVLIFGEDVGVNGGVFRVTEGLQKEFGEDRVFDTPLAESGIGGLAMGLAVEGFRPVMEVQFLGFVFEVFDAIAGQIARTRFRSGGT-KTAPVTIRSPFGGGVHTPELHADNLEGILAQSPGLKVVIPSGPYDAKGLLISSIRSNDPVVYLEHMKLYRSFREEVPEEEYTIDIGKANVKKEGNDISIITYGAMV 214 The following BLAST results are available for this feature:
BLAST of CX043461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 57
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Sequences
The
following sequences are available for this feature:
EST sequence >CX043461 ID=CX043461; Name=CX043461; organism=Citrus sinensis; type=EST; length=813bpback to top |