EG358218

Overview
NameEG358218
Unique NameEG358218
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length415
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358218 vs. ExPASy Swiss-Prot
Match: PME1_FICAW (Pectinesterase/pectinesterase inhibitor OS=Ficus awkeotsang PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 9.747e-27
Identity = 51/89 (57.30%), Postives = 65/89 (73.03%), Query Frame = 3
Query:    3 SRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 269
            SRTV +++++  +I+PAGW+EW  DFAL TL+Y EY N GPGS T+ RVKW GYHV+TSP    QFTV   I G SWL +T V +T+GL
Sbjct:  455 SRTVVMESYISDVIDPAGWLEWDRDFALKTLFYGEYRNGGPGSGTSERVKWPGYHVITSPEVAEQFTVAELIQGGSWLGSTGVDYTAGL 543          
BLAST of EG358218 vs. ExPASy Swiss-Prot
Match: PME40_ARATH (Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana GN=PME40 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.836e-26
Identity = 50/89 (56.18%), Postives = 66/89 (74.16%), Query Frame = 3
Query:    3 SRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 269
            SRTV +K+F+D L++PAGW++W  DFAL TLYY EYMN GPGS+  NRV+W G+  + +  + SQF+VG FI GN WL +T +PFT  L
Sbjct:  430 SRTVIMKSFIDDLVDPAGWLKWKDDFALETLYYGEYMNEGPGSNMTNRVQWPGFKRIETVEEASQFSVGPFIDGNKWLNSTRIPFTLDL 518          
BLAST of EG358218 vs. ExPASy Swiss-Prot
Match: PME59_ARATH (Probable pectinesterase/pectinesterase inhibitor 59 OS=Arabidopsis thaliana GN=PME59 PE=2 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 3.704e-26
Identity = 53/91 (58.24%), Postives = 66/91 (72.53%), Query Frame = 3
Query:    3 SRTVYIKTFLDSLINPAGWMEW--SGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 269
            SRTV ++T+LD++++P GW  W     F L+TL+YAEY NTGP SST  RV W+G+HVL   S  S FTVG FIAG +WLP T +PFTSGL
Sbjct:  446 SRTVVLQTYLDNVVSPVGWSPWIEGSVFGLDTLFYAEYKNTGPASSTRWRVSWKGFHVLGRASDASAFTVGKFIAGTAWLPRTGIPFTSGL 536          
BLAST of EG358218 vs. ExPASy Swiss-Prot
Match: PME44_ARATH (Probable pectinesterase/pectinesterase inhibitor 44 OS=Arabidopsis thaliana GN=PME44 PE=2 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 6.318e-26
Identity = 48/89 (53.93%), Postives = 64/89 (71.91%), Query Frame = 3
Query:    3 SRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 269
            SRTV+I+  +  ++ P GW+EW+ DFAL+TL+Y E+MN GPGS  ++RVKW GYHV  +  Q + FTV  FI GN WLP+T V F+ GL
Sbjct:  435 SRTVFIRNNMSDVVRPEGWLEWNADFALDTLFYGEFMNYGPGSGLSSRVKWPGYHVFNNSDQANNFTVSQFIKGNLWLPSTGVTFSDGL 523          
BLAST of EG358218 vs. ExPASy Swiss-Prot
Match: PME6_ARATH (Probable pectinesterase/pectinesterase inhibitor 6 OS=Arabidopsis thaliana GN=PME6 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 8.251e-26
Identity = 50/89 (56.18%), Postives = 66/89 (74.16%), Query Frame = 3
Query:    3 SRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 269
            SRTV++K  L +L++PAGW+ WSG FAL+TLYY EY NTG G+S + RVKW GYHV+ + ++  +FTV NF+ GN W+ AT VP   GL
Sbjct:  466 SRTVFMKCNLGALVSPAGWLPWSGSFALSTLYYGEYGNTGAGASVSGRVKWPGYHVIKTVTEAEKFTVENFLDGNYWITATGVPVNDGL 554          
BLAST of EG358218 vs. ExPASy Swiss-Prot
Match: PME33_ARATH (Probable pectinesterase/pectinesterase inhibitor 33 OS=Arabidopsis thaliana GN=PME33 PE=2 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 8.251e-26
Identity = 52/91 (57.14%), Postives = 67/91 (73.63%), Query Frame = 3
Query:    3 SRTVYIKTFLDSLINPAGWMEW--SGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 269
            SR   +KT++D+ I+P GW  W    +FALNT++Y EY N GPGSST  RV+W+G+H +TS +  S+FTVG+ IAG SWLPAT VPF SGL
Sbjct:  504 SRVTIMKTYIDNSISPLGWSPWLRGSNFALNTVFYGEYKNFGPGSSTRWRVRWKGFHAITSTAVASRFTVGSLIAGGSWLPATGVPFKSGL 594          
BLAST of EG358218 vs. ExPASy Swiss-Prot
Match: PME41_ARATH (Probable pectinesterase/pectinesterase inhibitor 41 OS=Arabidopsis thaliana GN=PME41 PE=2 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 1.078e-25
Identity = 49/89 (55.06%), Postives = 68/89 (76.40%), Query Frame = 3
Query:    3 SRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 269
            SRTV++++++D ++ P GW EW+GDFAL+TLYYAEY NTG GSST +RV W GYHV+ S +  + FTV NF+ G+ W+  + VP+ SGL
Sbjct:  484 SRTVFMQSYIDEVVEPVGWREWNGDFALSTLYYAEYNNTGSGSSTTDRVVWPGYHVINS-TDANNFTVENFLLGDGWMVQSGVPYISGL 571          
BLAST of EG358218 vs. ExPASy Swiss-Prot
Match: PME61_ARATH (Probable pectinesterase/pectinesterase inhibitor 61 OS=Arabidopsis thaliana GN=PME61 PE=1 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 1.838e-25
Identity = 51/89 (57.30%), Postives = 65/89 (73.03%), Query Frame = 3
Query:    3 SRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 269
            SR VY+ + +   I+P GW+EW+G FAL++LYY EYMN G GS    RVKW GYHV+TS  + S+FTV  FI+G+SWLP+T V F SGL
Sbjct:  497 SRVVYMMSDMGDHIDPRGWLEWNGPFALDSLYYGEYMNKGLGSGIGQRVKWPGYHVITSTVEASKFTVAQFISGSSWLPSTGVSFFSGL 585          
BLAST of EG358218 vs. ExPASy Swiss-Prot
Match: PME_DAUCA (Pectinesterase OS=Daucus carota PE=1 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 2.401e-25
Identity = 49/89 (55.06%), Postives = 67/89 (75.28%), Query Frame = 3
Query:    3 SRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 269
            SRTV +++ + ++INPAGW  W G+FAL+TLYY EY NTG G++T+ RV W+G+ V+TS ++   FT G+FIAG SWL AT  PF+ GL
Sbjct:  231 SRTVVMQSSITNVINPAGWFPWDGNFALDTLYYGEYQNTGAGAATSGRVTWKGFKVITSSTEAQGFTPGSFIAGGSWLKATTFPFSLGL 319          
BLAST of EG358218 vs. ExPASy Swiss-Prot
Match: PME7_ARATH (Probable pectinesterase/pectinesterase inhibitor 7 OS=Arabidopsis thaliana GN=PME7 PE=2 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 2.401e-25
Identity = 50/89 (56.18%), Postives = 64/89 (71.91%), Query Frame = 3
Query:    3 SRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 269
            SRTVY+++++D  + P GW EW+GDFAL+TLYYAEY NTGPGS+T NRV W GYHV+ S +  + FTV        W+  T VP+TSGL
Sbjct:  490 SRTVYMQSYIDGFVEPVGWREWNGDFALSTLYYAEYNNTGPGSNTTNRVTWPGYHVINS-TDAANFTVTGLFIEADWIWKTGVPYTSGL 577          
The following BLAST results are available for this feature:
BLAST of EG358218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
PME1_FICAW9.747e-2757.30Pectinesterase/pectinesterase inhibitor OS=Ficus a... [more]
PME40_ARATH2.836e-2656.18Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME59_ARATH3.704e-2658.24Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME44_ARATH6.318e-2653.93Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME6_ARATH8.251e-2656.18Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME33_ARATH8.251e-2657.14Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME41_ARATH1.078e-2555.06Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME61_ARATH1.838e-2557.30Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME_DAUCA2.401e-2555.06Pectinesterase OS=Daucus carota PE=1 SV=1[more]
PME7_ARATH2.401e-2556.18Probable pectinesterase/pectinesterase inhibitor 7... [more]

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Properties
Property NameValue
Genbank description12f11 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl012f11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358218 ID=EG358218; Name=EG358218; organism=Citrus sinensis; type=EST; length=415bp
ACTCGCGAACCGTTTATATCAAGACCTTCCTTGACAGCTTGATAAACCCC
GCTGGATGGATGGAATGGAGTGGTGATTTTGCTTTGAATACTCTGTATTA
TGCCGAGTATATGAACACTGGCCCGGGTTCTTCAACTGCTAACAGAGTCA
AGTGGCGTGGCTATCACGTTCTTACCAGTCCGTCCCAGGTTAGCCAGTTC
ACCGTAGGCAACTTTATTGCTGGAAATTCTTGGTTGCCGGCCACCAACGT
CCCCTTCACTTCCGGTCTCTAGGTTGATCATTCTTTGTTTATATTTTATT
GCACATGAAATTAATACCAACTTGTTGAGGTAATTAGGAGGAAAAATAAT
AATAATAAGGTAGTTAAAAGGAACTACCATCTTGGCATTGTCAGTTGTTA
TTCTTTGTGAAGTTG
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