EG358218

Overview
NameEG358218
Unique NameEG358218
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length415
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358218 vs. ExPASy Swiss-Prot
Match: PME22_ARATH (Putative pectinesterase/pectinesterase inhibitor 22 OS=Arabidopsis thaliana GN=PME22 PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 2.401e-25
Identity = 50/89 (56.18%), Postives = 66/89 (74.16%), Query Frame = 3
Query:    3 SRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 269
            SRTVY+ T++  L+ P GW+EW G+FAL+TL+Y EY N GPG  ++ RVKW GYH++   + +S FTVG+FI G  WLPAT V FT+GL
Sbjct:  454 SRTVYMNTYMSQLVQPRGWLEWFGNFALDTLWYGEYNNIGPGWRSSGRVKWPGYHIMDKRTALS-FTVGSFIDGRRWLPATGVTFTAGL 541          
BLAST of EG358218 vs. ExPASy Swiss-Prot
Match: PME_PRUPE (Pectinesterase/pectinesterase inhibitor PPE8B OS=Prunus persica PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 4.095e-25
Identity = 47/87 (54.02%), Postives = 63/87 (72.41%), Query Frame = 3
Query:    3 SRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTS 263
            SRTV +++FL ++I P GW+EW+GDFALN+L+Y EYMN GPG+   +RVKW GY V    +Q   +TV  FI GN WLP+T V +T+
Sbjct:  432 SRTVIMQSFLSNVIRPEGWLEWNGDFALNSLFYGEYMNYGPGAGLGSRVKWPGYQVFNESTQAKNYTVAQFIEGNLWLPSTGVKYTA 518          
BLAST of EG358218 vs. ExPASy Swiss-Prot
Match: PME60_ARATH (Probable pectinesterase/pectinesterase inhibitor 60 OS=Arabidopsis thaliana GN=PME60 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.348e-25
Identity = 49/91 (53.85%), Postives = 67/91 (73.63%), Query Frame = 3
Query:    3 SRTVYIKTFLDSLINPAGWMEWS--GDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 269
            SRTV +KT++DS+++P GW  W+    + L+TL+YAEY N GP SST  RV+W+G+HVL+  S  S F+VG FIAG +WLP + +PFTS L
Sbjct:  450 SRTVVLKTYIDSVVSPVGWSPWTKGSTYGLDTLFYAEYKNIGPASSTRWRVRWKGFHVLSKASDASAFSVGKFIAGTAWLPGSGIPFTSEL 540          
BLAST of EG358218 vs. ExPASy Swiss-Prot
Match: PME46_ARATH (Probable pectinesterase/pectinesterase inhibitor 46 OS=Arabidopsis thaliana GN=PME46 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.348e-25
Identity = 48/87 (55.17%), Postives = 65/87 (74.71%), Query Frame = 3
Query:    3 SRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTS 263
            S TV +K+F+D  INP GW+ W+GD A +T++YAEY+N+GPG+ST NRVKW+G     +  + ++FTV  FI GN+WLPAT VPF S
Sbjct:  476 STTVIMKSFMDKFINPKGWLPWTGDTAPDTIFYAEYLNSGPGASTKNRVKWQGLKTSLTKKEANKFTVKPFIDGNNWLPATKVPFNS 562          
BLAST of EG358218 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 5.348e-25
Identity = 48/89 (53.93%), Postives = 68/89 (76.40%), Query Frame = 3
Query:    3 SRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 269
            SRTV +++ +  LI+PAGW EW G+FALNTL+Y E+ N+G G+ T+ RVKW+G+ V+TS ++   FT G+FIAG+SWL +T  PF+ GL
Sbjct:  496 SRTVIMQSSITDLIHPAGWHEWDGNFALNTLFYGEHQNSGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 584          
BLAST of EG358218 vs. ExPASy Swiss-Prot
Match: PME39_ARATH (Probable pectinesterase/pectinesterase inhibitor 39 OS=Arabidopsis thaliana GN=PME39 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 1.192e-24
Identity = 49/88 (55.68%), Postives = 66/88 (75.00%), Query Frame = 3
Query:    3 SRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSG 266
            SRTV IK+F+D LI+PAGW+E   DFAL TLYY EYMN GPG++ A RV W G+  + + ++ +QFTVG FI G++WL +T +PF+ G
Sbjct:  444 SRTVIIKSFIDDLIHPAGWLEGKKDFALETLYYGEYMNEGPGANMAKRVTWPGFRRIENQTEATQFTVGPFIDGSTWLNSTGIPFSLG 531          
BLAST of EG358218 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 1.556e-24
Identity = 47/89 (52.81%), Postives = 67/89 (75.28%), Query Frame = 3
Query:    3 SRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 269
            SRTV +++ +  +I+PAGW EW G+FALNTL+Y E+ N G G+ T+ RVKW+G+ V+TS ++   FT G+FIAG+SWL +T  PF+ GL
Sbjct:  496 SRTVIMQSSITDVIHPAGWHEWDGNFALNTLFYGEHQNAGAGAGTSGRVKWKGFRVITSATEAQAFTPGSFIAGSSWLGSTGFPFSLGL 584          
BLAST of EG358218 vs. ExPASy Swiss-Prot
Match: PME35_ARATH (Probable pectinesterase/pectinesterase inhibitor 35 OS=Arabidopsis thaliana GN=PME35 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 2.032e-24
Identity = 49/89 (55.06%), Postives = 63/89 (70.79%), Query Frame = 3
Query:    3 SRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 269
            SRTV +++F+D  I+P+GW  WS +FAL TLYY E+ N+GPGSS + RV W GYH   + ++   FTV  FI GNSWLP+T V F SGL
Sbjct:  440 SRTVVMQSFIDGSIHPSGWSPWSSNFALKTLYYGEFGNSGPGSSVSGRVSWAGYHPALTLTEAQGFTVSGFIDGNSWLPSTGVVFDSGL 528          
BLAST of EG358218 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 3.467e-24
Identity = 47/89 (52.81%), Postives = 66/89 (74.16%), Query Frame = 3
Query:    3 SRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 269
            SRTV +++ +  +I PAGW EW+G+FAL+TL+Y EY NTG G+ T+ RVKW+G+ V+TS ++   +T G FIAG SWL +T  PF+ GL
Sbjct:  495 SRTVIMQSSITDVIQPAGWHEWNGNFALDTLFYGEYANTGAGAPTSGRVKWKGHKVITSSTEAQAYTPGRFIAGGSWLSSTGFPFSLGL 583          
BLAST of EG358218 vs. ExPASy Swiss-Prot
Match: PME23_ARATH (Probable pectinesterase/pectinesterase inhibitor 23 OS=Arabidopsis thaliana GN=PME23 PE=2 SV=3)

HSP 1 Score: 110.153 bits (274), Expect = 3.467e-24
Identity = 49/87 (56.32%), Postives = 64/87 (73.56%), Query Frame = 3
Query:    3 SRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTS 263
            SRT+ +KT +D +I+PAGW+ WSGDFAL TLYYAE+MNTGPGS+ A RVKW G   LT P     +T   F+ G++W+P T VP+T+
Sbjct:  481 SRTIIMKTTIDDVIDPAGWLPWSGDFALKTLYYAEHMNTGPGSNQAQRVKWPGIKKLT-PQDALLYTGDRFLRGDTWIPQTQVPYTA 566          
The following BLAST results are available for this feature:
BLAST of EG358218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
PME22_ARATH2.401e-2556.18Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME_PRUPE4.095e-2554.02Pectinesterase/pectinesterase inhibitor PPE8B OS=P... [more]
PME60_ARATH5.348e-2553.85Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME46_ARATH5.348e-2555.17Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME1_CITSI5.348e-2553.93Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE... [more]
PME39_ARATH1.192e-2455.68Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME3_CITSI1.556e-2452.81Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1[more]
PME35_ARATH2.032e-2455.06Probable pectinesterase/pectinesterase inhibitor 3... [more]
PMEU1_SOLLC3.467e-2452.81Pectinesterase/pectinesterase inhibitor U1 OS=Sola... [more]
PME23_ARATH3.467e-2456.32Probable pectinesterase/pectinesterase inhibitor 2... [more]

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Properties
Property NameValue
Genbank description12f11 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl012f11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358218 ID=EG358218; Name=EG358218; organism=Citrus sinensis; type=EST; length=415bp
ACTCGCGAACCGTTTATATCAAGACCTTCCTTGACAGCTTGATAAACCCC
GCTGGATGGATGGAATGGAGTGGTGATTTTGCTTTGAATACTCTGTATTA
TGCCGAGTATATGAACACTGGCCCGGGTTCTTCAACTGCTAACAGAGTCA
AGTGGCGTGGCTATCACGTTCTTACCAGTCCGTCCCAGGTTAGCCAGTTC
ACCGTAGGCAACTTTATTGCTGGAAATTCTTGGTTGCCGGCCACCAACGT
CCCCTTCACTTCCGGTCTCTAGGTTGATCATTCTTTGTTTATATTTTATT
GCACATGAAATTAATACCAACTTGTTGAGGTAATTAGGAGGAAAAATAAT
AATAATAAGGTAGTTAAAAGGAACTACCATCTTGGCATTGTCAGTTGTTA
TTCTTTGTGAAGTTG
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