EG358218

Overview
NameEG358218
Unique NameEG358218
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length415
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358218 vs. ExPASy Swiss-Prot
Match: PME3_ARATH (Pectinesterase/pectinesterase inhibitor 3 OS=Arabidopsis thaliana GN=PME3 PE=2 SV=2)

HSP 1 Score: 108.997 bits (271), Expect = 7.723e-24
Identity = 46/89 (51.69%), Postives = 63/89 (70.79%), Query Frame = 3
Query:    3 SRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 269
            S+TV +++ +  +I P GW EW+G FALNTL Y EY NTG G+ TANRVKWRG+ V+T+ ++  ++T G FI G  WL +T  PF+ GL
Sbjct:  504 SQTVIMQSAISDVIRPEGWSEWTGTFALNTLTYREYSNTGAGAGTANRVKWRGFKVITAAAEAQKYTAGQFIGGGGWLSSTGFPFSLGL 592          
BLAST of EG358218 vs. ExPASy Swiss-Prot
Match: PME38_ARATH (Putative pectinesterase/pectinesterase inhibitor 38 OS=Arabidopsis thaliana GN=PME38 PE=2 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 1.009e-23
Identity = 48/89 (53.93%), Postives = 61/89 (68.54%), Query Frame = 3
Query:    3 SRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 269
            +RTV I T+LD+LI P GW++W    AL+TLYY EY N+GPGS T NRV W G+HV++   +  +FT+  FI   SWLP T VPFT  L
Sbjct:  386 ARTVVIGTYLDTLIEPNGWIDWDNVTALSTLYYGEYQNSGPGSGTENRVDWAGFHVISDIQEAREFTLPKFIDSASWLPPTKVPFTINL 474          
BLAST of EG358218 vs. ExPASy Swiss-Prot
Match: PME34_ARATH (Probable pectinesterase/pectinesterase inhibitor 34 OS=Arabidopsis thaliana GN=PME34 PE=2 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 1.317e-23
Identity = 45/89 (50.56%), Postives = 64/89 (71.91%), Query Frame = 3
Query:    3 SRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 269
            SRTVY+ +++   ++  GW+EW+  FAL+TLYY EY+N+GPGS    RV W GY V+ S ++ ++FTV  FI G+SWLP+T V F +GL
Sbjct:  508 SRTVYMMSYIGGHVHTRGWLEWNTTFALDTLYYGEYLNSGPGSGLGQRVSWPGYRVINSTAEANRFTVAEFIYGSSWLPSTGVSFLAGL 596          
BLAST of EG358218 vs. ExPASy Swiss-Prot
Match: PME2_ARATH (Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 PE=2 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 2.247e-23
Identity = 47/89 (52.81%), Postives = 61/89 (68.54%), Query Frame = 3
Query:    3 SRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 269
            SRTV +++ +  +I P GW EWSG FAL+TL Y EY+N G G+ TANRVKW+GY V+TS ++   FT G FI G  WL +T  PF+  L
Sbjct:  499 SRTVIMQSDISDVIRPEGWHEWSGSFALDTLTYREYLNRGGGAGTANRVKWKGYKVITSDTEAQPFTAGQFIGGGGWLASTGFPFSLSL 587          
BLAST of EG358218 vs. ExPASy Swiss-Prot
Match: PME58_ARATH (Probable pectinesterase/pectinesterase inhibitor 58 OS=Arabidopsis thaliana GN=PME58 PE=2 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.935e-23
Identity = 48/85 (56.47%), Postives = 60/85 (70.59%), Query Frame = 3
Query:    3 SRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPF 257
            SRT+ + T +D +I+PAGW+ W+GDFALNTLYYAEY N GPGS+ A RVKW G   L SP Q  +FT   F+ GN W+P   VP+
Sbjct:  483 SRTIIMGTTIDDVIDPAGWLPWNGDFALNTLYYAEYENNGPGSNQAQRVKWPGIKKL-SPKQALRFTPARFLRGNLWIPPNRVPY 566          
BLAST of EG358218 vs. ExPASy Swiss-Prot
Match: PME18_ARATH (Pectinesterase/pectinesterase inhibitor 18 OS=Arabidopsis thaliana GN=PME18 PE=1 SV=2)

HSP 1 Score: 104.76 bits (260), Expect = 1.457e-22
Identity = 45/89 (50.56%), Postives = 59/89 (66.29%), Query Frame = 3
Query:    3 SRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 269
            SRTV +++F+D+ I+PAGW  W G+FAL+TLYY EY NTGPG+ T+ RV W+G+ V+    +  QFTV   I G  WL  T V F   L
Sbjct:  469 SRTVIMQSFIDNHIDPAGWFPWDGEFALSTLYYGEYANTGPGADTSKRVNWKGFKVIKDSKEAEQFTVAKLIQGGLWLKPTGVTFQEWL 557          
BLAST of EG358218 vs. ExPASy Swiss-Prot
Match: PME16_ARATH (Probable pectinesterase/pectinesterase inhibitor 16 OS=Arabidopsis thaliana GN=PME16 PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 5.535e-22
Identity = 45/89 (50.56%), Postives = 61/89 (68.54%), Query Frame = 3
Query:    3 SRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 269
            SRTV +++F+   I+P+GW  WSG F L +L+Y EY N+GPGSS + RVKW G H   + ++  +FTV +FI GN WLP+T V F  GL
Sbjct:  428 SRTVVMQSFIGGSIHPSGWSPWSGGFGLKSLFYGEYGNSGPGSSVSGRVKWSGCHPSLTVTEAEKFTVASFIDGNIWLPSTGVSFDPGL 516          
BLAST of EG358218 vs. ExPASy Swiss-Prot
Match: PME25_ARATH (Probable pectinesterase/pectinesterase inhibitor 25 OS=Arabidopsis thaliana GN=PME25 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 7.229e-22
Identity = 41/89 (46.07%), Postives = 65/89 (73.03%), Query Frame = 3
Query:    3 SRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 269
            SRTV++++++  ++ P GW+EW+G   L+T+YY EY N GPG++T  RV+W GY++L + ++   FTV NF  G++WLP T++PF  GL
Sbjct:  528 SRTVFMQSYISDIVQPVGWLEWNGTIGLDTIYYGEYSNFGPGANTNQRVQWLGYNLL-NLAEAMNFTVYNFTMGDTWLPQTDIPFYGGL 615          
BLAST of EG358218 vs. ExPASy Swiss-Prot
Match: PME24_ARATH (Putative pectinesterase/pectinesterase inhibitor 24 OS=Arabidopsis thaliana GN=PME24 PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 2.103e-21
Identity = 47/89 (52.81%), Postives = 61/89 (68.54%), Query Frame = 3
Query:    3 SRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 269
            S TV + ++L   I+  GW+ W+GD A +T++Y EY NTGPG+ST NRVKW+G   L S  + ++FTV  FI G  WLPAT VPF SGL
Sbjct:  474 STTVIMDSYLHGFIDRKGWLPWTGDSAPDTIFYGEYKNTGPGASTKNRVKWKGLRFL-STKEANRFTVKPFIDGGRWLPATKVPFRSGL 561          
BLAST of EG358218 vs. ExPASy Swiss-Prot
Match: PME47_ARATH (Probable pectinesterase/pectinesterase inhibitor 47 OS=Arabidopsis thaliana GN=PME47 PE=2 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 3.588e-21
Identity = 43/89 (48.31%), Postives = 62/89 (69.66%), Query Frame = 3
Query:    3 SRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 269
            SRTVYI++++  ++ P GW+EW+G   L+T+ Y EY N GPG+ T+ RV+W GY +L +  Q   FTV NF  G++WLP T++PF  GL
Sbjct:  533 SRTVYIQSYISDVVQPVGWLEWNGTTGLDTISYGEYDNFGPGADTSKRVQWSGYSLL-NLVQAMNFTVYNFTLGDTWLPQTDIPFYGGL 620          
The following BLAST results are available for this feature:
BLAST of EG358218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
PME3_ARATH7.723e-2451.69Pectinesterase/pectinesterase inhibitor 3 OS=Arabi... [more]
PME38_ARATH1.009e-2353.93Putative pectinesterase/pectinesterase inhibitor 3... [more]
PME34_ARATH1.317e-2350.56Probable pectinesterase/pectinesterase inhibitor 3... [more]
PME2_ARATH2.247e-2352.81Pectinesterase 2 OS=Arabidopsis thaliana GN=PME2 P... [more]
PME58_ARATH2.935e-2356.47Probable pectinesterase/pectinesterase inhibitor 5... [more]
PME18_ARATH1.457e-2250.56Pectinesterase/pectinesterase inhibitor 18 OS=Arab... [more]
PME16_ARATH5.535e-2250.56Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME25_ARATH7.229e-2246.07Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME24_ARATH2.103e-2152.81Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME47_ARATH3.588e-2148.31Probable pectinesterase/pectinesterase inhibitor 4... [more]

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Properties
Property NameValue
Genbank description12f11 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl012f11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358218 ID=EG358218; Name=EG358218; organism=Citrus sinensis; type=EST; length=415bp
ACTCGCGAACCGTTTATATCAAGACCTTCCTTGACAGCTTGATAAACCCC
GCTGGATGGATGGAATGGAGTGGTGATTTTGCTTTGAATACTCTGTATTA
TGCCGAGTATATGAACACTGGCCCGGGTTCTTCAACTGCTAACAGAGTCA
AGTGGCGTGGCTATCACGTTCTTACCAGTCCGTCCCAGGTTAGCCAGTTC
ACCGTAGGCAACTTTATTGCTGGAAATTCTTGGTTGCCGGCCACCAACGT
CCCCTTCACTTCCGGTCTCTAGGTTGATCATTCTTTGTTTATATTTTATT
GCACATGAAATTAATACCAACTTGTTGAGGTAATTAGGAGGAAAAATAAT
AATAATAAGGTAGTTAAAAGGAACTACCATCTTGGCATTGTCAGTTGTTA
TTCTTTGTGAAGTTG
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