EG358218

Overview
NameEG358218
Unique NameEG358218
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length415
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EG358218 vs. ExPASy Swiss-Prot
Match: PME19_ARATH (Probable pectinesterase/pectinesterase inhibitor 19 OS=Arabidopsis thaliana GN=PME19 PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 1.044e-20
Identity = 39/89 (43.82%), Postives = 58/89 (65.17%), Query Frame = 3
Query:    3 SRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 269
            S    +++F+  L++PAGW  W G+  L+TL+Y EY N GPG+ T+ RVKW G+ V+  P Q ++FTV   + G +WL  T +P+ SGL
Sbjct:  436 STVAVMQSFIGDLVDPAGWTPWEGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKQATEFTVAKLLDGETWLKETRIPYESGL 524          
BLAST of EG358218 vs. ExPASy Swiss-Prot
Match: PME21_ARATH (Probable pectinesterase/pectinesterase inhibitor 21 OS=Arabidopsis thaliana GN=PME21 PE=2 SV=2)

HSP 1 Score: 98.2117 bits (243), Expect = 1.363e-20
Identity = 42/89 (47.19%), Postives = 56/89 (62.92%), Query Frame = 3
Query:    3 SRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 269
            SRT+ + TF+   + P GW  W GDF L TL+Y+E  NTGPGS+ ANRV W G   L S   + +FT   +I G+ W+P   VP+T+GL
Sbjct:  478 SRTIIMNTFIPDFVQPQGWQPWLGDFGLKTLFYSEVQNTGPGSALANRVTWAGIKTL-SEEDILKFTPAQYIQGDDWIPGKGVPYTTGL 565          
BLAST of EG358218 vs. ExPASy Swiss-Prot
Match: PME42_ARATH (Probable pectinesterase/pectinesterase inhibitor 42 OS=Arabidopsis thaliana GN=PME42 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 2.325e-20
Identity = 38/89 (42.70%), Postives = 58/89 (65.17%), Query Frame = 3
Query:    3 SRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 269
            S    +++F+  L++PAGW  W G+  L+TL+Y EY N GPG+ T+ RVKW G+ V+  P Q ++FTV   + G +WL  + +P+ SGL
Sbjct:  436 STVAVLQSFIGDLVDPAGWTPWEGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKQATEFTVAKLLDGETWLKESRIPYKSGL 524          
BLAST of EG358218 vs. ExPASy Swiss-Prot
Match: PME30_ARATH (Probable pectinesterase 30 OS=Arabidopsis thaliana GN=PME30 PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 6.766e-20
Identity = 37/89 (41.57%), Postives = 58/89 (65.17%), Query Frame = 3
Query:    3 SRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 269
            S    +++F+  L++PAGW  W G+  L+TL+Y EY N GPG+ T+ RVKW G+ V+  P + ++FTV   + G +WL  + +P+ SGL
Sbjct:  409 STVAVLQSFIGDLVDPAGWTPWKGETGLSTLHYREYQNRGPGAVTSRRVKWSGFKVMKDPKKATEFTVAKLLDGETWLKESRIPYESGL 497          
BLAST of EG358218 vs. ExPASy Swiss-Prot
Match: PME43_ARATH (Putative pectinesterase/pectinesterase inhibitor 43 OS=Arabidopsis thaliana GN=PME43 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 4.385e-19
Identity = 39/87 (44.83%), Postives = 57/87 (65.52%), Query Frame = 3
Query:    3 SRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTS 263
            SRT+ + T +D +I+P GW++W+  FALNTL+Y EY N G GS    RV+WRG   + S     +F  GNF+ GN+W+P T +P+ +
Sbjct:  615 SRTIIMNTEIDDVIDPEGWLKWNETFALNTLFYTEYRNRGRGSGQGRRVRWRGIKRI-SDRAAREFAPGNFLRGNTWIPQTRIPYNA 700          
BLAST of EG358218 vs. ExPASy Swiss-Prot
Match: PME12_ARATH (Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana GN=PME12 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 7.480e-19
Identity = 39/89 (43.82%), Postives = 58/89 (65.17%), Query Frame = 3
Query:    3 SRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 269
            SRTV +++++D  I+ +GW +W+G  AL+TLYY EY N GPGS T  RV W G+H++        FT   FI G+ WL +T+ P+ +G+
Sbjct:  460 SRTVVMESYIDEFIDGSGWSKWNGGEALDTLYYGEYNNNGPGSETVKRVNWPGFHIM-GYEDAFNFTATEFITGDGWLGSTSFPYDNGI 547          
BLAST of EG358218 vs. ExPASy Swiss-Prot
Match: PME28_ARATH (Putative pectinesterase/pectinesterase inhibitor 28 OS=Arabidopsis thaliana GN=PME28 PE=2 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 4.849e-18
Identity = 38/89 (42.70%), Postives = 55/89 (61.80%), Query Frame = 3
Query:    3 SRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 269
            SRT+ + TF+   + P GW  W G+F LNTL+Y+E  NTGPG++   RV W G   L S  ++ +FT   +I G++W+P   VP+  GL
Sbjct:  475 SRTIIMNTFIPDFVPPEGWQPWLGEFGLNTLFYSEVQNTGPGAAITKRVTWPGIKKL-SDEEILKFTPAQYIQGDAWIPGKGVPYILGL 562          
BLAST of EG358218 vs. ExPASy Swiss-Prot
Match: PME64_ARATH (Probable pectinesterase/pectinesterase inhibitor 64 OS=Arabidopsis thaliana GN=PME64 PE=2 SV=2)

HSP 1 Score: 85.1149 bits (209), Expect = 1.194e-16
Identity = 40/81 (49.38%), Postives = 50/81 (61.73%), Query Frame = 3
Query:    3 SRTVYIKTFLDSLINPAGWMEWSGDFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPAT 245
            SRTV++   L+SLI+P GWM W+GDFAL TLYY EY NTGPGS  ++RV W           V  ++V NFI  + W   T
Sbjct:  524 SRTVFVNCNLESLISPDGWMPWNGDFALKTLYYGEYKNTGPGSVRSSRVPWSSE---IPEKHVDVYSVANFIQADEWASTT 601          
BLAST of EG358218 vs. ExPASy Swiss-Prot
Match: PME45_ARATH (Putative pectinesterase/pectinesterase inhibitor 45 OS=Arabidopsis thaliana GN=PME45 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.011e-15
Identity = 41/90 (45.56%), Postives = 58/90 (64.44%), Query Frame = 3
Query:    3 SRTVYIKTFLDSLINPAGWMEWSG-DFALNTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 269
            SRTV +++ ++ +I+P GW+ W   DFA++TL YAEY N GP  +TA RVKW G+ VL +  +  +FTVG F+ G  W+ A   P   GL
Sbjct:  519 SRTVVMESTIEDVIDPVGWLRWQETDFAIDTLSYAEYKNDGPSGATAARVKWPGFRVL-NKEEAMKFTVGPFLQG-EWIQAIGSPVKLGL 606          
BLAST of EG358218 vs. ExPASy Swiss-Prot
Match: PME3_PHAVU (Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=2 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 2.252e-15
Identity = 38/90 (42.22%), Postives = 53/90 (58.89%), Query Frame = 3
Query:    3 SRTVYIKTFLDSLINPAGWMEWSGDFAL-NTLYYAEYMNTGPGSSTANRVKWRGYHVLTSPSQVSQFTVGNFIAGNSWLPATNVPFTSGL 269
            S TV +++ + +L+NP GWM W  +     T++YAEY N+GPG+  + RVKW GY    +     +FTV +FI G  WLP   V F S L
Sbjct:  492 STTVIMQSDIGALLNPVGWMSWVPNVEPPTTIFYAEYQNSGPGADVSQRVKWAGYKPTITDRNAEEFTVQSFIQGPEWLPNAAVQFDSTL 581          
The following BLAST results are available for this feature:
BLAST of EG358218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 59
Match NameE-valueIdentityDescription
PME19_ARATH1.044e-2043.82Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME21_ARATH1.363e-2047.19Probable pectinesterase/pectinesterase inhibitor 2... [more]
PME42_ARATH2.325e-2042.70Probable pectinesterase/pectinesterase inhibitor 4... [more]
PME30_ARATH6.766e-2041.57Probable pectinesterase 30 OS=Arabidopsis thaliana... [more]
PME43_ARATH4.385e-1944.83Putative pectinesterase/pectinesterase inhibitor 4... [more]
PME12_ARATH7.480e-1943.82Probable pectinesterase/pectinesterase inhibitor 1... [more]
PME28_ARATH4.849e-1842.70Putative pectinesterase/pectinesterase inhibitor 2... [more]
PME64_ARATH1.194e-1649.38Probable pectinesterase/pectinesterase inhibitor 6... [more]
PME45_ARATH1.011e-1545.56Putative pectinesterase/pectinesterase inhibitor 4... [more]
PME3_PHAVU2.252e-1542.22Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank description12f11 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl012f11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358218 ID=EG358218; Name=EG358218; organism=Citrus sinensis; type=EST; length=415bp
ACTCGCGAACCGTTTATATCAAGACCTTCCTTGACAGCTTGATAAACCCC
GCTGGATGGATGGAATGGAGTGGTGATTTTGCTTTGAATACTCTGTATTA
TGCCGAGTATATGAACACTGGCCCGGGTTCTTCAACTGCTAACAGAGTCA
AGTGGCGTGGCTATCACGTTCTTACCAGTCCGTCCCAGGTTAGCCAGTTC
ACCGTAGGCAACTTTATTGCTGGAAATTCTTGGTTGCCGGCCACCAACGT
CCCCTTCACTTCCGGTCTCTAGGTTGATCATTCTTTGTTTATATTTTATT
GCACATGAAATTAATACCAACTTGTTGAGGTAATTAGGAGGAAAAATAAT
AATAATAAGGTAGTTAAAAGGAACTACCATCTTGGCATTGTCAGTTGTTA
TTCTTTGTGAAGTTG
back to top