CX043432

Overview
NameCX043432
Unique NameCX043432
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length775
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_PSEU5 (3-ketoacyl-CoA thiolase OS=Pseudomonas stutzeri (strain A1501) GN=fadA PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.878e-17
Identity = 70/212 (33.02%), Postives = 101/212 (47.64%), Query Frame = 2
Query:  110 SIKPRDVCIVGVARTPMGGFLGTLS-SLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKD---GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727
            S+ PRD  IV   RTPMG   G +  +  A  + +  I+  L R   +DP+ V++V +G V  +   G   AR A+L   IP++    TV+++C S + A+  A Q+IQ    DV V GG+E M                GH S++ G+  +    L        MG  AE+  + H ITRE QD F   S +    A   G F  EI+P+E
Sbjct:    2 SLNPRDAVIVDFGRTPMGRSKGGMHRNTRAETMSAQLIDGLLARNPKIDPAEVEDVIWGCVNQTLEQGWNIARMASLLTRIPHTSAGQTVSRLCGSSMSALHTAVQAIQTNNGDVFVIGGVEHM----------------GHVSMMHGVDPNPQLSLHAAKASGMMGLTAEMLGKMHGITREAQDQFGYRSHQLAWKATQEGKFKDEIIPME 197          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_MARMS (3-ketoacyl-CoA thiolase OS=Marinomonas sp. (strain MWYL1) GN=fadA PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.878e-17
Identity = 74/227 (32.60%), Postives = 107/227 (47.14%), Query Frame = 2
Query:  113 IKPRDVCIVGVARTPMGGFL-GTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHD---SLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDE 775
            + P DV I+   R+PMG    G   ++ A  L +  ++   KR  NVD   V+++ +G V  +   G   AR  +L AG+P +    TVN++C S + AI  A+Q+I  G  DV V GG+E M +          G   G D   +L   M K  +        MG  AE+  + H ++RE+QD FAV S      A   G F  EIV +E     G    +V+ DE
Sbjct:    3 LNPNDVVIIDAVRSPMGKTKNGVFRNVRAENLSAALVKELFKRNPNVDQKDVEDLIWGCVNQTLEQGFNMARAVSLLAGLPITCAAQTVNRLCGSSMSAIHTAAQAIMTGQGDVFVVGGVEHMGHV---------GMMHGVDVNPALSKHMAKASM-------MMGVTAEMLGKMHGVSREDQDAFAVRSHRLAHEATLQGRFNNEIVSIEGHDADGN-KILVEVDE 212          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_VIBVY (3-ketoacyl-CoA thiolase OS=Vibrio vulnificus (strain YJ016) GN=fadA PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.453e-17
Identity = 71/221 (32.13%), Postives = 105/221 (47.51%), Query Frame = 2
Query:  122 RDVCIVGVARTPMGGFLG-TLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDE 775
            ++V IV   RTPMG   G       A  L +  ++  L R   V+PS ++++++G V      G   AR AAL AG+P  +   TVN++C S ++A+   +++I  G  ++ + GG+E M + P             H +   GM             MG  AE+  + H I+RE QD+FA  S  R  AA   G F  EI+P E  A  G   T+ D DE
Sbjct:    2 KNVVIVDCLRTPMGRSKGGAFRHTRAEDLSAHLMKGILARNPQVNPSEIEDIYWGCVQQTLEQGFNVARNAALLAGLPIEIGAVTVNRLCGSSMQALHDGARAIMTGDAEICLIGGVEHMGHVPMNHGVDFHPGMSKHVAKAAGM-------------MGLTAEMLGKLHGISREQQDEFAARSHARAHAATLEGRFKNEILPTEGHAADGTLFTL-DHDE 208          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_SHEFN (3-ketoacyl-CoA thiolase OS=Shewanella frigidimarina (strain NCIMB 400) GN=fadA PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.453e-17
Identity = 67/205 (32.68%), Postives = 97/205 (47.32%), Query Frame = 2
Query:  122 RDVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727
            +   IV   RTPMG    G   ++ A  L +  ++A + R   +DP+ +++V +G V      G   AR A+L AGIP +    TVN++C S + A+  A+++I  G  D  + GG+E M + P               +   GM             MG  AE+  + H ITRE QD FAV S +R  AA   G FA EI  +E
Sbjct:    2 KQAVIVDCIRTPMGRSKAGVFRNVRAETLSAELMKALMVRNPQLDPNDIEDVIWGCVQQTLEQGFNIARNASLLAGIPKTAGAVTVNRLCGSSMDALHQAARAIMTGQGDTFIIGGVEHMGHVPMNHGVDFHPGLANRVAKASGM-------------MGLTAEMLGKMHGITREQQDAFAVRSHQRAHAATIEGRFAKEIWGIE 193          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: THL_CLODI (Acetyl-CoA acetyltransferase (Fragment) OS=Clostridium difficile GN=thi PE=3 SV=2)

HSP 1 Score: 88.9669 bits (219), Expect = 3.203e-17
Identity = 46/93 (49.46%), Postives = 59/93 (63.44%), Query Frame = 2
Query:  122 RDVCIVGVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKA 400
            R+V I   ART +G F G   S+SA +LG  A + A+KRAN+ P ++ E   G VL+A LGQ  ARQ ALGAGIP      T+N VC SGL++
Sbjct:    2 REVVIASAARTAVGSFGGAFKSVSAVELGVTAAKEAIKRANITPDMIDESLLGGVLTAGLGQNIARQIALGAGIPVEKPAMTINIVCGSGLRS 94          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_PSEMY (3-ketoacyl-CoA thiolase OS=Pseudomonas mendocina (strain ymp) GN=fadA PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.203e-17
Identity = 69/212 (32.55%), Postives = 102/212 (48.11%), Query Frame = 2
Query:  110 SIKPRDVCIVGVARTPMGGFLGTLS-SLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKD---GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727
            S+ PRD  IV   RTPMG   G +  +  A  + +  I   L+R A +DP+ V++V +G V  +   G   AR A+L   IP++    TV+++C S + A+  A Q+IQ G  DV V GG+E M                GH  ++ G+  +    L+       MG  AE+  + H I+RE QD F   S      A   G F  EI+P++
Sbjct:    2 SLNPRDAVIVDFGRTPMGRSKGGMHRNTRAETMSAHLISKVLERNAKIDPAEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAGQTVSRLCGSSMSALHTAVQAIQTGNGDVFVVGGVEHM----------------GHVGMMHGVDPNPHLSLYAAKASGMMGLTAEMLGKMHGISREAQDAFGERSHRLAHKATVEGKFKDEIIPMQ 197          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_ERWCT (3-ketoacyl-CoA thiolase OS=Erwinia carotovora subsp. atroseptica GN=fadA PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 5.464e-17
Identity = 71/201 (35.32%), Postives = 100/201 (49.75%), Query Frame = 2
Query:  128 VCIVGVARTPMGGFLG-TLSSLSATKLGSIAIEAALKRAN-VDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVP 721
            V IV   RTPMG   G     + A  L +  + + L R   +D   + ++++G V  A   G   AR AAL A IP SV  TTVN++C S ++A+  A+++I +G  +V + GG+E M + P        G    H  L   + K           MG  AE+ A  H+I+RE QD FA  S +R   A  +GAF  EIVP
Sbjct:    4 VVIVDAVRTPMGRSKGGAFRQVRAEDLSAHLMRSLLSRNTALDAREIDDIYWGCVQQALEQGFNVARNAALLAEIPVSVPATTVNRLCGSSMQALHDAARAIMVGDANVCLIGGVEHMGHVPM-----NHGVDF-HPGLSRTIAKAA-------GMMGLTAEMLARMHNISREMQDQFAARSHQRAYHATQSGAFRHEIVP 191          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: THIK2_ARATH (3-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidopsis thaliana GN=PED1 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 7.136e-17
Identity = 66/219 (30.14%), Postives = 104/219 (47.49%), Query Frame = 2
Query:  125 DVCIVGVARTPM-GGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAP-ARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEV-----SAGRGKPSTI 760
            DV IV   RTP+     G         L +  + A +++ N++PS V ++  G VL+    +A   R AA  AG P +V   TVN+ C+SGL+A+   + +I+ G  D+ +  G+ESM+  P           +  +  V+  +K           MG  +E  A++  ++R+ QD  AV S  +  AA  AG F  EI+PV+        G  KP T+
Sbjct:   51 DVVIVAAHRTPLCKSKRGNFKDTYPDDLLAPVLRALIEKTNLNPSEVGDIVVGTVLAPGSQRASECRMAAFYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNP-----------MAWEGSVNPAVKKFAQAQNCLLPMGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITV 258          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_COLP3 (3-ketoacyl-CoA thiolase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=fadA PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 7.136e-17
Identity = 73/220 (33.18%), Postives = 107/220 (48.64%), Query Frame = 2
Query:  125 DVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSAN-LGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDE 775
            +V IV   RTPMG    G   ++ A  L +  ++  L R   ++P  +++V +G V      G   AR A+L AG+P S+   TVN++C S ++A+  AS SI  G  DV + GG+E M + P           + +D   D  L   +       +MG  AEL  +QH ITRE QD F   S ++   A  AG +  EIV  +     G   T+V+ DE
Sbjct:    3 EVVIVDCIRTPMGRSKAGVFRNVRAEALSAHLMKQILVRNPALNPEDIEDVIWGCVKQTKEQGFNIARNASLLAGLPKSIGGVTVNRLCGSSMEALHQASTSIMSGQGDVFLIGGVEHMGHVP-----------MMYDVDFDPALNKNI--ALASGNMGLTAELLGKQHGITREMQDAFGARSHQKAHEAHLAGRWDNEIVATQGHDATG-ALTLVEHDE 208          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_PECCP (3-ketoacyl-CoA thiolase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=fadA PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.590e-16
Identity = 69/201 (34.33%), Postives = 99/201 (49.25%), Query Frame = 2
Query:  128 VCIVGVARTPMGGFLG-TLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVP 721
            V IV   RTPMG   G     + A  L +  + + L R A +D   + ++++G V      G   AR AAL A IP +V  TTVN++C S ++A+  A+++I +G  DV + GG+E M + P        G    H  L   + K           MG  AE+    H+I+RE QD FA  S +R   A  +GAF  EI+P
Sbjct:    4 VVIVDAVRTPMGRSKGGAFRQVRAEDLSAHLMRSLLSRNAALDAREIDDIYWGCVQQTLEQGFNVARNAALLAEIPMNVPATTVNRLCGSSMQALHDAARTIMVGDADVCLIGGVEHMGHVPM-----NHGVDF-HPGLSRTIAKAA-------GMMGLTAEMLGRMHNISREMQDQFAARSHQRAHHATQSGAFRHEIIP 191          
The following BLAST results are available for this feature:
BLAST of CX043432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
FADA_PSEU51.878e-1733.023-ketoacyl-CoA thiolase OS=Pseudomonas stutzeri (s... [more]
FADA_MARMS1.878e-1732.603-ketoacyl-CoA thiolase OS=Marinomonas sp. (strain... [more]
FADA_VIBVY2.453e-1732.133-ketoacyl-CoA thiolase OS=Vibrio vulnificus (stra... [more]
FADA_SHEFN2.453e-1732.683-ketoacyl-CoA thiolase OS=Shewanella frigidimarin... [more]
THL_CLODI3.203e-1749.46Acetyl-CoA acetyltransferase (Fragment) OS=Clostri... [more]
FADA_PSEMY3.203e-1732.553-ketoacyl-CoA thiolase OS=Pseudomonas mendocina (... [more]
FADA_ERWCT5.464e-1735.323-ketoacyl-CoA thiolase OS=Erwinia carotovora subs... [more]
THIK2_ARATH7.136e-1730.143-ketoacyl-CoA thiolase 2, peroxisomal OS=Arabidop... [more]
FADA_COLP37.136e-1733.183-ketoacyl-CoA thiolase OS=Colwellia psychrerythra... [more]
FADA_PECCP1.590e-1634.333-ketoacyl-CoA thiolase OS=Pectobacterium carotovo... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11A08_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11A08-A15-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043432 ID=CX043432; Name=CX043432; organism=Citrus sinensis; type=EST; length=775bp
CTGCGCTTCCACCCGCAAAAACCATCTCCTCCTCACGTGATCCACACTCA
CTCTGAATCTCGCAGATCGTGATTGGCATTGACAAATGGCTCCAGCGGCA
GCATCTGATTCGATAAAGCCTAGAGATGTTTGTATTGTCGGGGTTGCTCG
TACACCAATGGGTGGATTTCTTGGTACTCTATCTTCCTTATCTGCTACCA
AGCTTGGATCTATCGCTATTGAAGCTGCTCTTAAGAGAGCAAATGTTGAT
CCATCACTTGTACAAGAAGTTTTCTTTGGTAATGTTCTCAGTGCAAATCT
AGGACAGGCTCCTGCTAGACAGGCTGCATTGGGTGCAGGAATTCCGAATT
CAGTGGTCTGTACTACTGTTAACAAAGTTTGTGCATCAGGGCTGAAAGCT
ATAATGCTTGCATCACAGAGTATCCAGTTGGGGATCAATGATGTCATTGT
GGCTGGAGGAATGGAAAGCATGTCTAACGCACCTAAATATTTGGCAGAAG
CGAGAAAGGGGTCTCGACTTGGACATGATTCTCTGGTTGATGGAATGCTT
AAAGATGGATTATGGGATGTTTATAATGATTGTAGCATGGGAACTTGTGC
TGAACTTTGTGCTGAACAACATTCAATAACAAGGGAGAATCAGGATGACT
TTGCTGTTCTGAGCTTTGAGCGTGGTATTGCTGCCCAAGATGCTGGTGCC
TTTGCATGGGAAATTGTTCCAGTTGAAGTTTCTGCGGGAAGGGGAAAACC
ATCAACCATTGTTGATAAGGATGAA
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