CX043432

Overview
NameCX043432
Unique NameCX043432
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length775
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: THIK_ENCCU (3-ketoacyl-CoA thiolase, peroxisomal OS=Encephalitozoon cuniculi GN=FOX3 PE=1 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.343e-23
Identity = 69/209 (33.01%), Postives = 111/209 (53.11%), Query Frame = 2
Query:  113 IKPRDVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSN--APKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEV 730
            I   DV +VG  RTP+G    G L SL   +L + AI   +++  +DP L++EV  G+ LS+  G   AR   L AG+P       +N++C SGL+++ L ++ I+ G  ++ +AGG ESM++   PK    +R G+    +   D ML           ++G  +E+  + H +TR   D++AV S +R + A   G F  EI+P+ V
Sbjct:    2 ISHEDVVVVGALRTPIGRATRGKLRSLRNDELVTAAIRGIIEKTGIDPRLIEEVILGHCLSSMEGNVAARMGVLRAGVPVETPVMIINRLCGSGLESVGLIAEKIRSGRIEIGLAGGFESMTSYGLPKEYTLSRGGA---CEDAEDCML-----------TLGEVSEMLGKTHGVTRSEADEYAVTSQKRALEATKKGHFLAEIIPMRV 196          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: THIKB_CANTR (3-ketoacyl-CoA thiolase B, peroxisomal OS=Candida tropicalis PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.290e-23
Identity = 82/238 (34.45%), Postives = 121/238 (50.84%), Query Frame = 2
Query:   83 QMAPAAASDSIK--PRDVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPST----IVDKDE 775
            Q+ P A    ++  P DV IV   RT +G GF G+  ++ +  + +  ++  +K+ N+DPSL+++V  GNVL+   G    R A L AGIP +     VN+ C+SGL AI   +  I+ G  +  +AGG ESMS   +   + R   R+      D  ++  L        MG   E  A Q +I+RE QD+FA  S+ +   A  +GAF  EI+P+  S  R    T    IVD DE
Sbjct:   10 QLKPNAKQSILQKNPDDVVIVAAYRTAIGKGFKGSFRNVHSEFILTEFLKEFIKKTNIDPSLIEDVAIGNVLNQAAGATEHRGACLAAGIPYTAAFIAVNRFCSSGLMAISDIANKIKTGEIECGLAGGAESMSTNYR---DPRVAPRIDPHLADDAQMEKCL------IPMGITNENVANQFNISRERQDEFAAKSYNKAAKAVASGAFKSEILPIR-SIIRNSDGTEKEIIVDTDE 237          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: PAAJ_ECOLI (Beta-ketoadipyl-CoA thiolase OS=Escherichia coli (strain K12) GN=paaJ PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 2.290e-23
Identity = 78/214 (36.45%), Postives = 116/214 (54.21%), Query Frame = 2
Query:  122 RDVCIVGVARTPMGGFLGTLSSLSATKLGSIAI-EAALKRANVDPSLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKG-SRLGH--DSLVDGMLKDGLW-DVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRG 745
            R+  I    RTP+G + G LSS+ A  L +I + E  ++   +D   + +V  G    A    +  AR A L AG+P SV  TT+N++C SGL A+  A+++I+ G  D+++AGG+ESMS AP  + +A    SR     D+ +     + L    +   SM   AE  AE   I+RE+QD FA+ S +R   AQ +G  A EIVPV +   +G
Sbjct:    2 REAFICDGIRTPIGRYGGALSSVRADDLAAIPLRELLVRNPRLDAECIDDVILGCANQAGEDNRNVARMATLLAGLPQSVSGTTINRLCGSGLDALGFAARAIKAGDGDLLIAGGVESMSRAPFVMGKAASAFSRQAEMFDTTIGWRFVNPLMAQQFGTDSMPETAENVAELLKISREDQDSFALRSQQRTAKAQSSGILAEEIVPVVLKNKKG 215          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: PAAJ_ECOLX (Beta-ketoadipyl-CoA thiolase OS=Escherichia coli GN=paaJ PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.664e-23
Identity = 77/214 (35.98%), Postives = 115/214 (53.74%), Query Frame = 2
Query:  122 RDVCIVGVARTPMGGFLGTLSSLSATKLGSIAI-EAALKRANVDPSLVQEVFFGNVLSANL-GQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKG-SRLGH--DSLVDGMLKDGLW-DVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRG 745
            R+  I    RTP+G + G LS + A  L +I + E  ++   +D   + +V  G    A    +  AR A L AG+P SV  TT+N++C SGL A+  A+++I+ G  D+++AGG+ESMS AP  + +A    SR     D+ +     + L    +   SM   AE  AE   I+RE+QD FA+ S +R   AQ +G  A EIVPV +   +G
Sbjct:    2 REAFICDGIRTPIGRYGGALSGVRADDLAAIPLRELLVRNPRLDAECIDDVILGCANQAGEDNRNVARMATLLAGLPQSVSGTTINRLCGSGLDALGFAARAIKAGDGDLLIAGGVESMSRAPFVMGKATSAFSRQAEMFDTTIGWRFVNPLMAQQFGTDSMPETAENVAELLKISREDQDSFALRSQQRTAKAQSSGILAEEIVPVVLKNKKG 215          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_BACSU (3-ketoacyl-CoA thiolase OS=Bacillus subtilis GN=fadA PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.485e-22
Identity = 74/206 (35.92%), Postives = 109/206 (52.91%), Query Frame = 2
Query:  122 RDVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVL-SANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVS 733
            ++  IV  ARTP+G    G+L+++    LG+I ++  LKRA      + ++  G     A  G   AR     AG+P +V   TVN+ C+SGL++I  A++ I LG  D  +AGG ESMS  P           +GH +  +  L +   + Y   SMG  AE  A+++ ++RE+QD FAV S +    A   G F  EIVPVEV+
Sbjct:    2 KEAVIVSGARTPVGKAKKGSLATVRPDDLGAICVKETLKRAGGYEGNIDDLIIGCATPEAEQGLNMARNIGALAGLPYTVPAITVNRYCSSGLQSIAYAAEKIMLGAYDTAIAGGAESMSQVP----------MMGHVTRPNLALAEKAPEYY--MSMGHTAEQVAKKYGVSREDQDAFAVRSHQNAAKALAEGKFKDEIVPVEVT 195          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_MARAV (3-ketoacyl-CoA thiolase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=fadA PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.368e-22
Identity = 73/209 (34.93%), Postives = 101/209 (48.33%), Query Frame = 2
Query:  110 SIKPRDVCIVGVARTPMGGFL-GTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727
            S+ PRDV +V   RTPMG    G   ++ A  L +  IEA  +R   +DP  V++V +G V  +   G   ARQ +L   IP+     TVN++C S + AI  A+Q+IQ G  DV + GG+E M + P         +   + +    M             MG  AE+ A+ H ITRE QD+F   S      A   G F  EIVP+E
Sbjct:    2 SLNPRDVVVVDCVRTPMGRAKNGCFRNVRAETLSAALIEALFERNPKLDPKEVEDVIWGCVNQTKEQGFNVARQISLLTRIPHESAAQTVNRLCGSAMSAIHTAAQAIQTGNGDVFLVGGVEHMGHVPMTEGFDHNPAASKYSAKASNM-------------MGLTAEMLAKMHGITREQQDEFGARSHRLAHEATQEGRFKNEIVPIE 197          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: THIK_YARLI (3-ketoacyl-CoA thiolase, peroxisomal OS=Yarrowia lipolytica GN=POT1 PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 9.623e-22
Identity = 76/234 (32.48%), Postives = 118/234 (50.43%), Query Frame = 2
Query:   92 PAAASDSI---KPRDVCIVGVARTP-MGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDC--SMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDE 775
            PA   D+I    P DV I    RT    G  G     S+++L +  +E  +K + +DP L+ +V  GNVL+A  G    R A L AGIP +V    +N+ C+SGL A+   +  I+ G  D+ +  G+ESMSN            + G +S+     K    +    C   MG  +E  A +++++R+ QD FA  S+E+  AAQ AG F  EI+P++        +T++D D+
Sbjct:   15 PAKGLDAITSKNPDDVVITAAYRTAHTKGGKGLFKDTSSSELLASLLEGLVKESKIDPKLIGDVVCGNVLAAGAGATEHRAACLVAGIPETVPFVALNRQCSSGLMAVNDVANKIRAGQIDIGIGCGVESMSN------------QYGPNSVTPFSNKFQNNEEAKKCLIPMGITSENVAAKYNVSRKAQDAFAAKSYEKAAAAQAAGKFDQEILPIK--------TTVLDDDD 228          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_AERS4 (3-ketoacyl-CoA thiolase OS=Aeromonas salmonicida (strain A449) GN=fadA PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 8.146e-21
Identity = 73/209 (34.93%), Postives = 103/209 (49.28%), Query Frame = 2
Query:  122 RDVCIVGVARTPMGGFLG------TLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727
            +DV IV   RTPMG   G          LSA  + SI     L+  N+DP+ ++++++G V      G   AR AAL AGIP  V   TVN++C S ++A+  AS++IQ+G  D+ + GG+E M + P               +   GM             MG  AE+  + H I+R+ QD+FA  S  R  AA   G FA EIV +E
Sbjct:    2 KDVVIVDCIRTPMGRSKGGAFRNVRAEDLSAHLMSSIL----LRNPNLDPNEIEDIYWGCVQQTLEQGFNIARNAALLAGIPKQVGAVTVNRLCGSSMQALHDASRAIQVGDGDIFIIGGVEHMGHVPMSHGVDFHPGMAKSVAKASGM-------------MGLTAEMLGKLHGISRQQQDEFAARSHRRAYAATVEGRFAREIVGLE 193          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: THIKA_MOUSE (3-ketoacyl-CoA thiolase A, peroxisomal OS=Mus musculus GN=Acaa1a PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.064e-20
Identity = 79/238 (33.19%), Postives = 119/238 (50.00%), Query Frame = 2
Query:   83 QMAPAAAS-DSIKPRDVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDC--SMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSA--GRGKPSTI-VDKDE 775
            Q AP +A        DV +V   RTP+G    G   + +  +L S  + A L+   + P  + ++  GNVL    G   AR A   +GIP +V  +TVN+ C+SGL+A+   +  I+ G  D+ +A G+ESMS            S +G+   +   L +   +   DC   MG  +E  AE+  I+R+ QDDFA+ S ++  +AQ  G F  EIVPV  +    +G   TI V +DE
Sbjct:   22 QAAPCSARFPQASASDVVVVHGRRTPIGRASRGGFKNTTPDELLSAVLTAVLQDVRLKPEQLGDISVGNVLEPGAGAVMARIAQFLSGIPETVPLSTVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMSL-----------SGMGNPGNISSRLLES--EKARDCLTPMGMTSENVAERFGISRQKQDDFALASQQKAASAQSRGCFRAEIVPVTTTVLDDKGDKKTITVSQDE 246          
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_AERHH (3-ketoacyl-CoA thiolase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=fadA PE=3 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.815e-20
Identity = 71/205 (34.63%), Postives = 105/205 (51.22%), Query Frame = 2
Query:  122 RDVCIVGVARTPMGGFLG-TLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727
            +DV IV   RTPMG   G    ++ A  L +  +++ L R  N+DP+ ++++++G V      G   AR AAL AGIP  V   TVN++C S ++A+  AS++IQ+G  D+ + GG+E M + P               +   GM             MG  AE+  + H I+R+ QD+FA  S  R  AA   G FA EIV +E
Sbjct:    2 KDVVIVDCIRTPMGRSKGGAFRNVRAEDLSAHLMKSILLRNPNLDPNEIEDIYWGCVQQTLEQGFNIARNAALLAGIPKQVGAVTVNRLCGSSMQALHDASRAIQVGDGDIFIIGGVEHMGHVPMSHGVDFHPGMAKSVAKASGM-------------MGLTAEMLGKLHGISRQQQDEFAARSHRRAHAATVEGRFAKEIVGLE 193          
The following BLAST results are available for this feature:
BLAST of CX043432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 239
Match NameE-valueIdentityDescription
THIK_ENCCU1.343e-2333.013-ketoacyl-CoA thiolase, peroxisomal OS=Encephalit... [more]
THIKB_CANTR2.290e-2334.453-ketoacyl-CoA thiolase B, peroxisomal OS=Candida ... [more]
PAAJ_ECOLI2.290e-2336.45Beta-ketoadipyl-CoA thiolase OS=Escherichia coli (... [more]
PAAJ_ECOLX6.664e-2335.98Beta-ketoadipyl-CoA thiolase OS=Escherichia coli G... [more]
FADA_BACSU1.485e-2235.923-ketoacyl-CoA thiolase OS=Bacillus subtilis GN=fa... [more]
FADA_MARAV7.368e-2234.933-ketoacyl-CoA thiolase OS=Marinobacter aquaeolei ... [more]
THIK_YARLI9.623e-2232.483-ketoacyl-CoA thiolase, peroxisomal OS=Yarrowia l... [more]
FADA_AERS48.146e-2134.933-ketoacyl-CoA thiolase OS=Aeromonas salmonicida (... [more]
THIKA_MOUSE1.064e-2033.193-ketoacyl-CoA thiolase A, peroxisomal OS=Mus musc... [more]
FADA_AERHH1.815e-2034.633-ketoacyl-CoA thiolase OS=Aeromonas hydrophila su... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11A08_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11A08-A15-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043432 ID=CX043432; Name=CX043432; organism=Citrus sinensis; type=EST; length=775bp
CTGCGCTTCCACCCGCAAAAACCATCTCCTCCTCACGTGATCCACACTCA
CTCTGAATCTCGCAGATCGTGATTGGCATTGACAAATGGCTCCAGCGGCA
GCATCTGATTCGATAAAGCCTAGAGATGTTTGTATTGTCGGGGTTGCTCG
TACACCAATGGGTGGATTTCTTGGTACTCTATCTTCCTTATCTGCTACCA
AGCTTGGATCTATCGCTATTGAAGCTGCTCTTAAGAGAGCAAATGTTGAT
CCATCACTTGTACAAGAAGTTTTCTTTGGTAATGTTCTCAGTGCAAATCT
AGGACAGGCTCCTGCTAGACAGGCTGCATTGGGTGCAGGAATTCCGAATT
CAGTGGTCTGTACTACTGTTAACAAAGTTTGTGCATCAGGGCTGAAAGCT
ATAATGCTTGCATCACAGAGTATCCAGTTGGGGATCAATGATGTCATTGT
GGCTGGAGGAATGGAAAGCATGTCTAACGCACCTAAATATTTGGCAGAAG
CGAGAAAGGGGTCTCGACTTGGACATGATTCTCTGGTTGATGGAATGCTT
AAAGATGGATTATGGGATGTTTATAATGATTGTAGCATGGGAACTTGTGC
TGAACTTTGTGCTGAACAACATTCAATAACAAGGGAGAATCAGGATGACT
TTGCTGTTCTGAGCTTTGAGCGTGGTATTGCTGCCCAAGATGCTGGTGCC
TTTGCATGGGAAATTGTTCCAGTTGAAGTTTCTGCGGGAAGGGGAAAACC
ATCAACCATTGTTGATAAGGATGAA
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