CX043432
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_ALCBS (3-ketoacyl-CoA thiolase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=fadA PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.280e-20 Identity = 76/212 (35.85%), Postives = 105/212 (49.53%), Query Frame = 2 Query: 110 SIKPRDVCIVGVARTPMGGFL-GTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGM-LKDGLWDVYNDCS--MGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727 S+ P+DV IV RTPMG G + A KL + I+A + R N D L ++V +G V + G AR ++ AG+P + TVN++C S ++A+ ASQSI G DV V GG+E M GH ++ G+ L + V S MG AE+ + H ITRE QD F V S + A G + EIVP+E Sbjct: 2 SLNPKDVVIVDAVRTPMGKSRNGQFRHVRAEKLSAQLIQALMARNPNWDIQLTEDVIWGCVNQTKEQGMNIARNISMLAGLPRTSAAQTVNRLCGSSMQALHSASQSIMTGNGDVFVIGGVEHM----------------GHVAMDHGIDLNPEMSKVTAKASNMMGLTAEMLGKMHGITREQQDAFGVRSHKLAWEATQQGRWDNEIVPIE 197
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_ALISL (3-ketoacyl-CoA thiolase OS=Aliivibrio salmonicida (strain LFI1238) GN=fadA PE=3 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 9.007e-20 Identity = 72/221 (32.58%), Postives = 110/221 (49.77%), Query Frame = 2 Query: 122 RDVCIVGVARTPMGGFL-GTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDE 775 ++V IV RTPMG G A L + ++ L+R NVDP+ ++++++G V G AR A+L AG+P S+ TTVN++C S ++A+ AS++I +G D+ + GG+E M + P + + GM MG AE+ + H I+RE QD FA S ++ A G F EI+P+E G T+V DE Sbjct: 2 KNVVIVDCIRTPMGRSKNGVFRHTRAEDLSAHLMKGLLERNPNVDPNQIEDIYWGCVQQTLEQGFNIARNASLLAGLPKSIAATTVNRLCGSSMQALHDASRAIMVGDADICIIGGVEHMGHVPMNHGVDFHSGLSKNVAKASGM-------------MGLTAEMLGKMHGISREQQDAFAFASHQKAHRATIEGHFDSEILPMEGHDENG-ALTLVKHDE 208
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: THIK_HUMAN (3-ketoacyl-CoA thiolase, peroxisomal OS=Homo sapiens GN=ACAA1 PE=1 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.536e-19 Identity = 83/249 (33.33%), Postives = 119/249 (47.79%), Query Frame = 2 Query: 62 ADRDWH*QMAPA-AASDSIKPRDVCIV-----GVARTPMGGFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDC--SMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPV--EVSAGRG-KPSTIVDKDE 775 AD W Q AP + + DV +V + R GGF T + +L S + A LK N+ P + ++ GNVL G AR A + IP +V +TVN+ C+SGL+A+ + I+ G D+ +A G+ESMS A + G+ + L + + DC MG +E AE+ I+RE QD FA+ S ++ AQ G F EIVPV V +G K S V +DE Sbjct: 15 ADSGWMPQAAPCLSGAPQASAADVVVVHGRRTAICRAGRGGFKDT----TPDELLSAVMTAVLKDVNLRPEQLGDICVGNVLQPGAGAIMARIAQFLSDIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADR-----------GNPGNITSRLMEK--EKARDCLIPMGITSENVAERFGISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDKGTKRSITVTQDE 246
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_SHELP (3-ketoacyl-CoA thiolase OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=fadA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.536e-19 Identity = 72/206 (34.95%), Postives = 103/206 (50.00%), Query Frame = 2 Query: 122 RDVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSA-NLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLK-DGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727 + IV RTPMG G ++ A L + ++A L R +DP+ +++V +G V G AR AAL AGIP TVN++C S ++AI A+++I G+ D + GG+E M + P G H L + K G+ MG AE+ + H ITR+ QD+FAV S +R AA G FA EI +E Sbjct: 2 KQAVIVDCIRTPMGRSKAGVFRNMRAESLSAELMKALLVRNPQLDPNTIEDVIWGCVQQTLEQGFNIARNAALLAGIPKQAGAVTVNRLCGSSMEAIHQAARAIMTGMGDTFIVGGVEHMGHVP-----MNHGVDF-HPGLATNVAKASGM--------MGLTAEMLGKMHGITRQQQDEFAVRSHQRAHAATVEGRFANEIHAIE 193
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_PSEFR (3-ketoacyl-CoA thiolase OS=Pseudomonas fragi GN=fadA PE=1 SV=2) HSP 1 Score: 96.6709 bits (239), Expect = 1.536e-19 Identity = 72/212 (33.96%), Postives = 106/212 (50.00%), Query Frame = 2 Query: 110 SIKPRDVCIVGVARTPMGGFLGTLS-SLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKD---GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727 S+ PRDV IV RTPMG G + + A + + I L+R + VDP V++V +G V + G AR A+L IP++ TV+++C S + A+ A+Q+I G DV V GG+E M GH S++ G+ + L+ MG AE+ + H I+RE QD FAV S + A G F EI+P++ Sbjct: 2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKVLERNSKVDPGEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM----------------GHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQ 197
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_PSEF5 (3-ketoacyl-CoA thiolase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=fadA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.536e-19 Identity = 73/212 (34.43%), Postives = 106/212 (50.00%), Query Frame = 2 Query: 110 SIKPRDVCIVGVARTPMGGFLGTLS-SLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNV-LSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKD---GLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVE 727 S+ PRDV IV RTPMG G + + A + + I L+R A VDP+ V++V +G V + G AR A+L IP++ TV+++C S + A+ A+Q+I G DV V GG+E M GH S++ G+ + L+ MG AE+ + H ITRE QD F V S + A G F EI+P++ Sbjct: 2 SLNPRDVVIVDFGRTPMGRSKGGMHRNTRAEDMSAHLISKLLERNAKVDPAEVEDVIWGCVNQTLEQGWNIARMASLMTQIPHTSAGQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHM----------------GHVSMMHGVDPNPHMSLYAAKASGMMGLTAEMLGKMHGITREQQDAFGVRSHQLAHKATVEGKFKDEIIPMQ 197
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: FADA_CHRSD (3-ketoacyl-CoA thiolase OS=Chromohalobacter salexigens (strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=fadA PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.536e-19 Identity = 75/226 (33.19%), Postives = 112/226 (49.56%), Query Frame = 2 Query: 110 SIKPRDVCIVGVARTPMGGFL-GTLSSLSATKLGSIAIEAALKR-ANVDPSLVQEVFFGNVLSANLGQAP--ARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSAGRGKPSTIVDKDE 775 S+ PRD+ +V RT M G ++ A L + ++A R AN+ P+ V +V +G V + L Q+ AR AA+ GIP +V TVN++C S + A+ +A+ +I+ G+ D + GG+E M + P + H VD + MG AEL + H + RE QD F V S +R AA + G F EIV VE G ++D+DE Sbjct: 2 SLNPRDIVVVDAVRTAMAKAKHGAFRNVRAENLSAAVMQALFDRNANLVPAEVDDVIWGCV-NQTLEQSMNIARNAAIMTGIPRTVPAQTVNRLCGSSMSALHIATANIKAGMGDFYIIGGVEHMEHVP-----------MTHG--VDVNPAASKYAAKAAMMMGLTAELLGKMHGVGREEQDAFGVRSHQRAQAANENGYFDNEIVGVEGHDADGF-LRLIDRDE 212
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: THIKA_RAT (3-ketoacyl-CoA thiolase A, peroxisomal OS=Rattus norvegicus GN=Acaa1a PE=2 SV=2) HSP 1 Score: 96.2857 bits (238), Expect = 2.006e-19 Identity = 78/238 (32.77%), Postives = 116/238 (48.74%), Query Frame = 2 Query: 83 QMAPAAAS-DSIKPRDVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDC--SMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSA--GRGKPSTI-VDKDE 775 Q AP +A+ DV +V RTP+G G + +L S + A L+ + P + ++ GNVL G AR A +GIP +V + VN+ C+SGL+A+ + I+ G D+ +A G+ESMS S G+ + L + D DC MG +E AE+ I+R+ QD FA+ S ++ +AQ G F EIVPV + +G TI V +DE Sbjct: 22 QAAPCSATFPQASASDVVVVHGRRTPIGRAGRGGFKDTTPDELLSAVLTAVLQDVKLKPECLGDISVGNVLEPGAGAVMARIAQFLSGIPETVPLSAVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMSL-----------SNRGNPGNISSRLLES--DKARDCLIPMGITSENVAERFGISRQKQDAFALASQQKAASAQSKGCFRAEIVPVTTTVLDDKGDRKTITVSQDE 246
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: THIKB_RAT (3-ketoacyl-CoA thiolase B, peroxisomal OS=Rattus norvegicus GN=Acaa1b PE=2 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 2.621e-19 Identity = 77/236 (32.63%), Postives = 116/236 (49.15%), Query Frame = 2 Query: 83 QMAPAAAS-DSIKPRDVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDCSMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSA--GRGKPSTI-VDKDE 775 Q AP +A DV +V RTP+G G + +L S + A L+ + P + ++ GNVL G A AR A +GIP +V + VN+ C+SGL+A+ + I+ G D+ +A G+ESM+ L+E + L + +D L MG +E AE+ I+R+ QD FA+ S ++ +AQ G F EIVPV + +G TI V +DE Sbjct: 22 QAAPCSAGFPQASASDVVVVHGRRTPIGRAGRGGFKDTTPDELLSAVLTAVLQDVKLKPECLGDISVGNVLQPGAGAAMARIAQFLSGIPETVPLSAVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMT-----LSERGNPGNISSRLLENEKARDCL------IPMGITSENVAERFGISRQKQDAFALASQQKAASAQSKGCFRAEIVPVTTTVLDDKGDRKTITVSQDE 246
BLAST of CX043432 vs. ExPASy Swiss-Prot
Match: THIKB_MOUSE (3-ketoacyl-CoA thiolase B, peroxisomal OS=Mus musculus GN=Acaa1b PE=2 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.621e-19 Identity = 76/238 (31.93%), Postives = 118/238 (49.58%), Query Frame = 2 Query: 83 QMAPAAASD-SIKPRDVCIVGVARTPMG-GFLGTLSSLSATKLGSIAIEAALKRANVDPSLVQEVFFGNVLSANLGQAPARQAALGAGIPNSVVCTTVNKVCASGLKAIMLASQSIQLGINDVIVAGGMESMSNAPKYLAEARKGSRLGHDSLVDGMLKDGLWDVYNDC--SMGTCAELCAEQHSITRENQDDFAVLSFERGIAAQDAGAFAWEIVPVEVSA--GRGKPSTI-VDKDE 775 Q AP +A DV +V RTP+G G + +L S + A L+ + P + ++ GNVL G AR A +GIP +V +TVN+ C+SGL+A+ + I+ G D+ +A G+ESM+ R H ++ +L++ + DC MG +E AE+ ++R+ QD FA+ S ++ +AQ G F EIVPV + +G TI V +DE Sbjct: 22 QAAPCSAGFLQASASDVVVVHGRRTPIGRASRGCFKDTTPDELLSAVLTAVLQDVKLKPEQLGDISVGNVLQPGAGAIMARIAQFLSGIPETVPLSTVNRQCSSGLQAVANIAGGIRNGSYDIGMACGVESMT----------LSQRGNHGNISSRLLEN---EKARDCLIPMGITSENVAERFGVSRQKQDAFALASQQKAASAQSRGCFHAEIVPVTTTVLNDKGDKKTITVSQDE 246 The following BLAST results are available for this feature:
BLAST of CX043432 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 239
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX043432 ID=CX043432; Name=CX043432; organism=Citrus sinensis; type=EST; length=775bpback to top |