CX043425

Overview
NameCX043425
Unique NameCX043425
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length672
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_METMJ (Orotate phosphoribosyltransferase OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=pyrE PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.242e-24
Identity = 69/174 (39.66%), Postives = 101/174 (58.05%), Query Frame = 1
Query:   46 NSMESLILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMV 567
            N + +L+L   E  A++FG F L SG  S  YID++   + P++L +I KTI     F    ++V GV   A+PIA  VS+++  P  + RKE KD+G A  I G+     + L++ED+ TSG S L     LRAAG  V   V ++DRE G RE L E G  L A++++SE++
Sbjct:    3 NPIATLLL---ECGAIEFGEFVLASGARSSYYIDIKAATTNPAVLTEIGKTIAEGREF----EMVAGVAVGAVPIAVAVSLASGRPYAVVRKEGKDHGKAGTIIGDVLGKNV-LLVEDVTTSGGSALYGLEALRAAGAHVDQVVTVVDREAGAREALAEKGASLLALVRVSELL 168          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_METJA (Orotate phosphoribosyltransferase OS=Methanocaldococcus jannaschii GN=pyrE PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.162e-24
Identity = 60/168 (35.71%), Postives = 98/168 (58.33%), Query Frame = 1
Query:   61 LILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEM 564
            LI  L E+  ++FG F L SG  S  YID++   + P +L+ + + I   +    +   V GV   ++PIAT VS+    P+L+ RK+ KDYGT   IEG  K+ +  +I+ED+ T+G SVL+    +R  G +V    V++DR +G +ENL++  +EL  ++ + E+
Sbjct:    7 LINLLKEVGCIRFGEFILASGKKSNYYIDIKKATTNPEILKLVGEIIAEQIK--DEDVKVAGVELGSVPIATAVSIIAQKPLLIVRKKPKDYGTKNKIEGELKEGDKVVIVEDVTTTGGSVLKAVKEIRENGGIVDKVFVVVDRLEGAKENLQKENVELIPLVTVKEL 172          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_HYPBU (Orotate phosphoribosyltransferase OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=pyrE PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 6.162e-24
Identity = 58/175 (33.14%), Postives = 103/175 (58.86%), Query Frame = 1
Query:   73 LHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLD 597
            L E  A++FG F+L SG +SP+YID+R++ S P L R++   +   L    + D+V GV    +  AT +++ ++ P+   R + K++G    +EG  +   + L+++D+ T+G+S+      LR AG     A+V++DREQG  E L + G++L+++  L E++  +  KG LD
Sbjct:   12 LVEAGAIRFGEFRLSSGSTSPIYIDMRIVPSKPQLFRRVLGMLAEKLNDVREVDVVVGVATAGIIWATGLALLSEKPLAYVRPKRKEHGLQRVVEGIVEGRRV-LVVDDVATTGSSLASAVESLREAGAEPVAAMVIVDREQGAVERLADYGVKLYSLATLREIIHAMVVKGYLD 185          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_THEAC (Orotate phosphoribosyltransferase OS=Thermoplasma acidophilum GN=pyrE PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.048e-24
Identity = 62/171 (36.26%), Postives = 101/171 (59.06%), Query Frame = 1
Query:   52 MESLILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEM 564
            M  L   L  + A+KFG+F L SG  S  Y+D++   + PS+LR+I+      +    +   + G+   A+P+    ++   +P ++ RKE + +GT   + G F+K E   +IED+VT+G SVL+    LR  G VV  A  ++DRE+GG + LKENGI+LH +I++S++
Sbjct:    1 MGGLEEDLLRVGAIKFGDFVLTSGKRSTYYVDIKEAATDPSVLRKIASEFSGMI----RSSKIAGMELGAVPLIVATALQMSIPYIIVRKE-RSHGTMSLLVGKFEKGEEIDVIEDVVTTGNSVLKAVNTLRENGAVVKRAYCVVDREEGGSDLLKENGIDLHPIIRISQV 166          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_HALSA (Orotate phosphoribosyltransferase OS=Halobacterium salinarium GN=pyrE PE=3 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 8.048e-24
Identity = 58/174 (33.33%), Postives = 97/174 (55.75%), Query Frame = 1
Query:   46 NSMESLILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMV 567
            ++ + L+  L    AV+FG F+L  G +S  Y+D  L  + P  L  I+      +   T    + GV    +P+A   +    VP ++ RK+ K+YGTA  IEG     E  +++ED+ T+G S ++    LR AG  V  A++++DRE+GGRE L E+G+E+ A++  S+++
Sbjct:    2 SATDDLVSALRAADAVQFGEFELSHGGTSEYYVDKYLFETDPECLSAIAAAFADRIDEDTT---LAGVALGGVPLAAATATEAGVPYVIARKQAKEYGTANRIEGRLDDGEEVVVVEDIATTGQSAVDAVDALRDAGATVNRALIVVDREEGGRELLAEHGVEMAALVTASDLL 172          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_METST (Orotate phosphoribosyltransferase OS=Methanosphaera stadtmanae (strain DSM 3091) GN=pyrE PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.373e-23
Identity = 61/172 (35.47%), Postives = 97/172 (56.40%), Query Frame = 1
Query:   61 LILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVL 576
            LI  L E + +KFG F L SG  S  Y+D++  ++ P +L  ++  I + +      D + G    A+PIAT  S+ +  PMLM RK  K YGT+  IEG   +++  +I+ED+ T+G S+L+    +   G  +  A V++DRE+G +E  KEN IE   ++ +SE  + L
Sbjct:    8 LINLLKENNVIKFGKFTLSSGRESDYYVDMKKAITEPEILDCVAHLITNEIEHDN-IDKIAGPALGAVPIATATSLISKKPMLMIRKAKKTYGTSKQIEGELLENDDVVIVEDVTTTGGSLLKAINVIEDNGGNIVKAFVIVDREEGAQETFKENNIEFTPLLTISEFKKYL 178          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_STAMF (Orotate phosphoribosyltransferase OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=pyrE PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.793e-23
Identity = 62/201 (30.85%), Postives = 110/201 (54.73%), Query Frame = 1
Query:   40 SSNSMESLILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEENK 642
            S + +E ++L+L+     K G ++L SG  SP YIDLR++ SY  +  +I    +S L     +D+V G+    +  A+ ++     P+   RK+ K +GT   +EG    D   L+++D+ T+G S+      +R+ G +V  A V +DRE+G RE LK  G+EL +++ +  ++ VL +   +DE+T  ++  +L   K
Sbjct:    3 SESVLEEIVLELYRNKLFKIGEYRLTSGKISPYYIDLRILPSYYDIYSKIIDISLSKLE-KLNFDIVVGIESAGIIHASFIACKTHKPVGYVRKKPKQHGTKRLVEG-IVADRNVLVVDDVATTGGSLEHAVNAVRSMGGIVEKAFVFVDREEGARERLKRLGVELISLMNIWFIINVLVKHRLIDEQTYYLIKNYLNREK 201          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_METMA (Orotate phosphoribosyltransferase OS=Methanosarcina mazei GN=pyrE PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 1.793e-23
Identity = 61/184 (33.15%), Postives = 103/184 (55.98%), Query Frame = 1
Query:   31 NAMSSNSMES----LILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVR 570
            N+ + N+ E     LI  L    AV++G+F L SG  S  YID++   + P  L+ I++     +      D V GV    +P+AT VS+  ++P+L+ RK +KDYGT     G+ K ++  +++ED+ TSG SV +    +R AG  +   + ++DRE+G  E LKE  +EL  ++  S++++
Sbjct:    5 NSETGNNFEQQKQELIAALKACGAVRYGDFTLASGKKSKYYIDIKKASTDPKTLKIIARQAALRIK-EMDVDTVAGVELGGVPLATAVSLETELPLLIVRKSVKDYGTKSRFVGDLKPEDRLVMLEDVTTSGGSVRDAIEVVREAGASLKYVITVVDREEGAGEKLKEADVELVPLVSASDLLK 187          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_PYRAE (Orotate phosphoribosyltransferase OS=Pyrobaculum aerophilum GN=pyrE PE=3 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 5.216e-23
Identity = 69/196 (35.20%), Postives = 109/196 (55.61%), Query Frame = 1
Query:   61 LILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISK---TIISSLPFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLK-ENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEE 636
            +I +L +I AVKFG FKL SG+ SP Y+DLR ++  P L + + +    ++S L F    D++ GV    +P A+ +      PM   R E K YGT   IEG     +   +++D++T+G SVL     +RA+G  V   VV +DR Q G E +K E G+ ++++ K+ E++  LR    + EE  R V+ +L +
Sbjct:    1 MIKRLVDIGAVKFGAFKLSSGLESPFYVDLRSVLGEPELFQWVIERYEAVLSGLEF----DVIIGVATGGIPYASVLGYRLKKPMGYVRDEAKGYGTGRQIEGADVAGKRAAVVDDVLTTGKSVLNAIRAVRASGGEVAGVVVFLDRGQCGAEAVKREAGVYVYSVYKMRELLEELRP--HIGEERYRSVLDYLSQ 190          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_METHJ (Orotate phosphoribosyltransferase OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=pyrE PE=3 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.162e-22
Identity = 56/160 (35.00%), Postives = 100/160 (62.50%), Query Frame = 1
Query:   88 AVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMV 567
            A++FG+F L SG  S VYID++  ++ P++L++I+  +++    +T +D V GV    +P+A  VS+++D P ++ RKE K +G A  I G+     I L++ED+ TSG S +     LR+AG VVTD + ++DR +G  + L+   I L  ++++ +++
Sbjct:   15 AIRFGDFTLASGKKSTVYIDIKKAITSPAILKKIAAEVLTH---STDFDAVAGVAVGGVPLAVSVSLASDKPYVIIRKEQKGHGLASLIIGDVAGKRI-LLVEDVTTSGGSAVFGIEQLRSAGAVVTDVIAVVDRNEGAGKTLQGLDITLTPLVRMQDLI 170          
The following BLAST results are available for this feature:
BLAST of CX043425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 268
Match NameE-valueIdentityDescription
PYRE_METMJ1.242e-2439.66Orotate phosphoribosyltransferase OS=Methanoculleu... [more]
PYRE_METJA6.162e-2435.71Orotate phosphoribosyltransferase OS=Methanocaldoc... [more]
PYRE_HYPBU6.162e-2433.14Orotate phosphoribosyltransferase OS=Hyperthermus ... [more]
PYRE_THEAC8.048e-2436.26Orotate phosphoribosyltransferase OS=Thermoplasma ... [more]
PYRE_HALSA8.048e-2433.33Orotate phosphoribosyltransferase OS=Halobacterium... [more]
PYRE_METST1.373e-2335.47Orotate phosphoribosyltransferase OS=Methanosphaer... [more]
PYRE_STAMF1.793e-2330.85Orotate phosphoribosyltransferase OS=Staphylotherm... [more]
PYRE_METMA1.793e-2333.15Orotate phosphoribosyltransferase OS=Methanosarcin... [more]
PYRE_PYRAE5.216e-2335.20Orotate phosphoribosyltransferase OS=Pyrobaculum a... [more]
PYRE_METHJ1.162e-2235.00Orotate phosphoribosyltransferase OS=Methanospiril... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11A03_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11A03-A5-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043425 ID=CX043425; Name=CX043425; organism=Citrus sinensis; type=EST; length=672bp
CTTCGTCCCGCTGACAACCCAAAAGGCCGAAATGCAATGTCGTCGAATTC
GATGGAGTCATTGATTCTCCAACTCCACGAGATCTCGGCGGTTAAATTCG
GAAACTTTAAGCTAAAATCCGGCATATCGTCTCCCGTTTACATCGACCTC
CGACTTATCGTTTCTTACCCTTCCCTCCTCCGCCAAATATCCAAAACCAT
CATCTCCTCCCTCCCCTTCACAACCAAATACGACCTCGTGTGCGGCGTTC
CGTACACCGCCCTCCCAATCGCCACCTGCGTCTCCGTCTCCAACGACGTC
CCCATGCTCATGCGGCGCAAGGAAATCAAAGACTACGGCACCGCCNAGGC
CATCGAAGGTAATTTCAAGAAGGACGAAATCTGTCTGATCATCGAAGATT
TAGTCACCAGCGGCGCGTCGGTCCTCGAAACGGCGGTGCCATTGAGAGCG
GCGGGGCTGGTGGTGACGGACGCCGTCGTATTGATCGACAGAGAGCAGGG
AGGGAGGGAGAATCTGAAGGAGAACGGAATTGAGTTGCATGCGATGATAA
AGCTGAGCGAAATGGTTAGGGTTTTGAGGGAGAAAGGGAAGCTTGATGAG
GAAACGGAGAGAGTGGTGATGAAGTTTTTGGAGGAGAACAAGAAAGTGGC
GGCTTCGAATTTAGGTGGGGTT
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