CX043425

Overview
NameCX043425
Unique NameCX043425
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length672
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_PROMM (Orotate phosphoribosyltransferase OS=Prochlorococcus marinus (strain MIT 9313) GN=pyrE PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.982e-11
Identity = 52/181 (28.73%), Postives = 94/181 (51.93%), Query Frame = 1
Query:   88 AVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFTTKYDLVC--GVPYTALPIATCVSVS-----NDVPMLMRRKEIKDYGTAXAIEGNFKKDEICL-IIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEET 606
            A + G+F L SG  S  Y++ + +    S L  +   ++  +    + D VC  G+   A P+ + V+++       +  L+ RK+ K +GTA  +EG        + ++ED+VT+G S L+    LR  G +VT  V ++DR++GG E L    +EL ++ +L+++    R+   L+ ET
Sbjct:   23 AYRHGDFTLASGRQSNHYVNCKPVSLSGSGLALLGLALLKYV----EPDAVCVAGLTLGADPLVSAVAMAAAQAERTLNALIVRKQAKGHGTAAWLEGPLPPSGARITVLEDVVTTGGSSLKAVQQLRETGYLVTRVVTIVDRQEGGEEALNAAELELVSLYQLNQVAERARQ---LETET 196          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_BACP2 (Orotate phosphoribosyltransferase OS=Bacillus pumilus (strain SAFR-032) GN=pyrE PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.982e-11
Identity = 41/132 (31.06%), Postives = 66/132 (50.00%), Query Frame = 1
Query:   64 ILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISS-LPFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAG 456
            +LQ+  +S      F   SGI SP+Y D RL +SYP +   I++ +    L      +++ G     +P A   +   + PM   R + K +G    IEG   K +  +++EDL+++G SVLE    L+ AG
Sbjct:    9 LLQIKAVSLKPDEPFTWASGIKSPIYCDNRLTLSYPEVRHDIAEGLKELILTHFEGAEVIAGTATAGIPHAALAADRLNAPMCYVRSKPKAHGKGNQIEGAVSKGQKVVVVEDLISTGGSVLEVVAALQEAG 140          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_ALTMD (Orotate phosphoribosyltransferase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=pyrE PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 5.982e-11
Identity = 45/188 (23.94%), Postives = 94/188 (50.00%), Query Frame = 1
Query:   79 EISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFTTKYDLVCGVPYTALPIATCVSVSN------DVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENL-------KENGIELHAMIKLSEMVRVLREKGKLDEE 603
            E   +KFG F LKSG  SP + +  L      L +       + +    +++++ G  Y  +PIAT  +V+       DVP    RKE K +G    + G+  + ++ ++++D++T+G ++ E+   +      ++  ++ +DR++ G+  L       ++   ++ +++ L+++V  L EKG  D E
Sbjct:   14 ERGVLKFGEFTLKSGRVSPYFFNAGLFNRGGDLAKLGRFYANALMDAGVEFNVLFGPAYKGIPIATTTAVALADNHNLDVPYCFNRKEAKTHGEGGNLVGSPLEGKV-MLVDDVITAGTAIRESMTLIEQQQASLSGVLIALDRQERGKGELSAIQEVERDFNTQVISIVSLADVVSYLGEKGGFDNE 200          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_PSEPW (Orotate phosphoribosyltransferase OS=Pseudomonas putida (strain W619) GN=pyrE PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.813e-11
Identity = 50/193 (25.91%), Postives = 96/193 (49.74%), Query Frame = 1
Query:   91 VKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKT-----IISSLPFTTKYDLVCGVPYTALPIATCVSVSN------DVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENL-------KENGIELHAMIKLSEMVRVLREKGKLDEETERV 615
            ++FG F LKSG +SP + +  L  +  S L Q+ +      + S +PF    D++ G  Y  +P+A   +V+       DVP    RKE KD+G   ++ G     ++ LII+D++T+G ++ E    + A        ++ ++RE+ G   L       ++ GI + +++ L++++  L +  +L +    V
Sbjct:   18 LRFGEFTLKSGRTSPYFFNAGLF-NTGSALAQLGRCYAAAIVDSKIPF----DVLFGPAYKGIPLAAATAVALAEQHQLDVPWCFNRKEAKDHGEGGSLVGAPLAGDV-LIIDDVITAGTAIREVMQIINAQQAKAAGVLIALNREERGNGELSAIQEVERDFGIPVVSIVSLTQVLEFLADDPQLKQHLPAV 204          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_PSEE4 (Orotate phosphoribosyltransferase OS=Pseudomonas entomophila (strain L48) GN=pyrE PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.813e-11
Identity = 50/193 (25.91%), Postives = 96/193 (49.74%), Query Frame = 1
Query:   91 VKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKT-----IISSLPFTTKYDLVCGVPYTALPIATCVSVSN------DVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENL-------KENGIELHAMIKLSEMVRVLREKGKLDEETERV 615
            ++FG F LKSG +SP + +  L  +  S L Q+ +      + S +PF    D++ G  Y  +P+A   +V+       DVP    RKE KD+G   ++ G     ++ LII+D++T+G ++ E    + A        ++ ++RE+ G   L       ++ GI + +++ L++++  L +  +L +    V
Sbjct:   18 LRFGEFTLKSGRTSPYFFNAGLF-NTGSALAQLGRCYAAAIVDSKIPF----DVLFGPAYKGIPLAAATAVALAEQHQLDVPWCFNRKEAKDHGEGGSLVGAPLAGDV-LIIDDVITAGTAIREVMQIINAQQAKAAGVLIALNREERGNGELSAIQEVERDFGIPVVSIVSLTQVLEFLADDPQLKQHLPAV 204          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_PHOLL (Orotate phosphoribosyltransferase OS=Photorhabdus luminescens subsp. laumondii GN=pyrE PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.813e-11
Identity = 45/188 (23.94%), Postives = 94/188 (50.00%), Query Frame = 1
Query:   91 VKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFTTKYDLVCGVPYTALPIATCVSVSN------DVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGG-------RENLKENGIELHAMIKLSEMVRVLREKGKLDEETERV 615
            +KFG F LKSG  SP + +  L  +   L         + L    + DL+ G  Y  +PIAT  +V+       D+P    RKE KD+G    + G+  K  + ++++D++T+G ++ E+   ++     +   ++ +DR++ G       +E  ++ G ++ ++I L++++  L  + ++ +  + V
Sbjct:   18 LKFGEFTLKSGRKSPYFFNAGLFNTGRDLALIGRFYAAALLDSGIQCDLLFGPAYKGIPIATTTAVALAEHHDIDMPYCFNRKEAKDHGEGGTLVGSPLKGNV-VLVDDVITAGTAIRESMEIIKQHNATLAGVMICLDRQERGNGEISAIQEVERDYGCKVFSIITLNDLINYLSGQPEMKDHLDAV 204          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_LACBA (Orotate phosphoribosyltransferase OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=pyrE PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.813e-11
Identity = 45/168 (26.79%), Postives = 82/168 (48.81%), Query Frame = 1
Query:  106 FKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSL----PFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDRE-QGGRENLKENGIELHAMIKLSEMVRVLREKGKL 594
            F   SG+ +P+Y D R  +++P +   I+  + S +    P  T   ++ GV    +  A  V+   ++PM   R + KD+G    IEG     +  ++I+DL+++G SVL  A  +R AG  V   V +   E      N ++ G+ L  +   S ++ V +++ K+
Sbjct:   25 FLWASGMQAPIYTDNRRTIAFPQVRTHIADGLASLIKHRYPTAT---VISGVATAGITHAALVADRLNLPMSYVRAKPKDHGKGKQIEGQMTASDQVVLIDDLISTGGSVLAAAKAVRKAGATVLGVVAIFSYELPDSVVNFQQAGLALTPLTTYSTLITVAQQQAKI 189          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_BACSU (Orotate phosphoribosyltransferase OS=Bacillus subtilis GN=pyrE PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.813e-11
Identity = 42/128 (32.81%), Postives = 66/128 (51.56%), Query Frame = 1
Query:  106 FKLKSGISSPVYIDLRLIVSYPSLLRQ----ISKTIISSLPFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAV 477
            F   SGI SP+Y D RL +S+P +       ISK +    P   + +++ G     +P A   +   ++PM   R + K +G    IEG  ++ +  ++IEDL+++G SVLE    L+AAG  V   V
Sbjct:   29 FTWASGILSPIYCDNRLTLSFPEVRNDVASGISKLVKEHFP---EAEMIAGTATAGIPHAALAADHLNLPMCYVRSKPKAHGKGNQIEGAVQEGQKTVVIEDLISTGGSVLEACAALQAAGCEVLGVV 153          
The following BLAST results are available for this feature:
BLAST of CX043425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 268
Match NameE-valueIdentityDescription
PYRE_PROMM5.982e-1128.73Orotate phosphoribosyltransferase OS=Prochlorococc... [more]
PYRE_BACP25.982e-1131.06Orotate phosphoribosyltransferase OS=Bacillus pumi... [more]
PYRE_ALTMD5.982e-1123.94Orotate phosphoribosyltransferase OS=Alteromonas m... [more]
PYRE_PSEPW7.813e-1125.91Orotate phosphoribosyltransferase OS=Pseudomonas p... [more]
PYRE_PSEE47.813e-1125.91Orotate phosphoribosyltransferase OS=Pseudomonas e... [more]
PYRE_PHOLL7.813e-1123.94Orotate phosphoribosyltransferase OS=Photorhabdus ... [more]
PYRE_LACBA7.813e-1126.79Orotate phosphoribosyltransferase OS=Lactobacillus... [more]
PYRE_BACSU7.813e-1132.81Orotate phosphoribosyltransferase OS=Bacillus subt... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS07_11A03_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11A03-A5-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043425 ID=CX043425; Name=CX043425; organism=Citrus sinensis; type=EST; length=672bp
CTTCGTCCCGCTGACAACCCAAAAGGCCGAAATGCAATGTCGTCGAATTC
GATGGAGTCATTGATTCTCCAACTCCACGAGATCTCGGCGGTTAAATTCG
GAAACTTTAAGCTAAAATCCGGCATATCGTCTCCCGTTTACATCGACCTC
CGACTTATCGTTTCTTACCCTTCCCTCCTCCGCCAAATATCCAAAACCAT
CATCTCCTCCCTCCCCTTCACAACCAAATACGACCTCGTGTGCGGCGTTC
CGTACACCGCCCTCCCAATCGCCACCTGCGTCTCCGTCTCCAACGACGTC
CCCATGCTCATGCGGCGCAAGGAAATCAAAGACTACGGCACCGCCNAGGC
CATCGAAGGTAATTTCAAGAAGGACGAAATCTGTCTGATCATCGAAGATT
TAGTCACCAGCGGCGCGTCGGTCCTCGAAACGGCGGTGCCATTGAGAGCG
GCGGGGCTGGTGGTGACGGACGCCGTCGTATTGATCGACAGAGAGCAGGG
AGGGAGGGAGAATCTGAAGGAGAACGGAATTGAGTTGCATGCGATGATAA
AGCTGAGCGAAATGGTTAGGGTTTTGAGGGAGAAAGGGAAGCTTGATGAG
GAAACGGAGAGAGTGGTGATGAAGTTTTTGGAGGAGAACAAGAAAGTGGC
GGCTTCGAATTTAGGTGGGGTT
back to top