CX043425

Overview
NameCX043425
Unique NameCX043425
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length672
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_ARCFU (Orotate phosphoribosyltransferase OS=Archaeoglobus fulgidus GN=pyrE PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.377e-21
Identity = 54/171 (31.58%), Postives = 101/171 (59.06%), Query Frame = 1
Query:   55 ESLILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMV 567
            ++L+ ++ E+ A+KFG+F L SG  S VY+D++L  ++P +L  IS+ + + L    ++D +  V    +PIA  +S+    P+++ RKE KDYG      G  K+ E  +++ED++T+G+S L  A  +  +G  V   + ++DRE+ GR  +        +++KLS+++
Sbjct:    6 DALVKRMIEVGALKFGDFVLSSGKRSRVYVDVKLASTFPDILEMISEGMAAKLK-DLEFDRIACVELGGVPIAVALSLKMKKPLVIFRKEKKDYGIKGDRIGEVKEGEKVVVVEDVITTGSSALSAARRVEESGASVAAIIAVVDREESGRNFM--------SLLKLSDLI 167          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_RHISN (Orotate phosphoribosyltransferase OS=Rhizobium sp. (strain NGR234) GN=pyrE PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 8.328e-21
Identity = 72/214 (33.64%), Postives = 109/214 (50.93%), Query Frame = 1
Query:   55 ESLILQLHEISAVKFGN---FKLKSGISSPVYIDLRLIVSYPSLLRQI----SKTIISSLPFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLI--DREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEENKKVAASNLGG 669
            E +   L EI AV F     +KL SG++SPVYID R ++SYP +   +    + TI+    F  ++D+V G     +P A  ++    +PM+  RK  K +G    IEG+  +    L+IEDL T+G S+ +    +RAAG +V   + L   D     R N+K  G++LH +     ++ V RE+   DE+T   V  FL  N  +A S   G
Sbjct:   14 ELVAKMLWEIKAVHFRADEPYKLSSGMASPVYIDCRKLISYPRIRSAVMDFAAATILRDAGFE-QFDVVAGGETAGIPFAAMLAERLGLPMIYVRKAPKGHGRNAQIEGHMPEGARVLVIEDLTTAGGSMFKFIDAIRAAGGIVEHGIALFYYDIFPEARGNMKSKGVDLHYIATWRNVLAVAREQALFDEKTLNEVEAFL--NAPLAWSERNG 224          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_SINMW (Orotate phosphoribosyltransferase OS=Sinorhizobium medicae (strain WSM419) GN=pyrE PE=3 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.088e-20
Identity = 72/215 (33.49%), Postives = 110/215 (51.16%), Query Frame = 1
Query:   55 ESLILQLHEISAVKFGN---FKLKSGISSPVYIDLRLIVSYPSLLRQI----SKTIISSLPFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLI--DREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEENKKVAASNLGGV 672
            E +   L EI AV F     +KL SG++SPVYID R ++SYP +   +    + TI+    F  ++D+V G     +P A  ++    +PM+  RK  K +G    IEGN  +    L+IEDL T+G S+ +    +RAAG +V   + L   D     R ++K  G++LH +     ++ V RE    D++T   V  FL+     +A N GGV
Sbjct:   14 ELVAKMLWEIKAVHFRADEPYKLSSGMASPVYIDCRKLISYPRIRSAVMDFAAATILREAGFE-QFDVVAGGETAGIPFAAMLAERLGLPMIYVRKAPKGHGRNAQIEGNMPEGARVLVIEDLTTAGGSMFKFIDAIRAAGGMVEHGIALFYYDIFPEARGDMKSKGVDLHFIATWRNVLSVARELALFDDKTLNEVEAFLDAPLAWSAKN-GGV 226          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_SULSO (Orotate phosphoribosyltransferase OS=Sulfolobus solfataricus GN=pyrE PE=3 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.398e-20
Identity = 54/189 (28.57%), Postives = 109/189 (57.67%), Query Frame = 1
Query:   73 LHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEEN 639
            L E   +  G+F L SG  SP Y+DLR + +YP     +++ I  +      +D++ G+    +P++  ++ +   PM   R E K +GT   +E + K   + L+++D+ T+G S+ +  + +   G  V+DA+V+IDR++G  + L++ G++LH++ K+SE++  L +  KL +  ++ ++ +L +N
Sbjct:    7 LLERKLLLIGSFVLTSGKVSPYYLDLRPLPNYPEFYDIVNQAIKKAKDIP--HDIIVGIATGGVPLSAFIACNLKEPMGYIRIEKKGHGTNRTLELDVKGKRV-LLVDDVATTGVSIEKATLEILNGGGKVSDALVIIDRQEGASQRLEKLGVKLHSLFKISEILDELLKSDKLKDNEKKSILDYLVKN 192          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_RHIME (Orotate phosphoribosyltransferase OS=Rhizobium meliloti GN=pyrE PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.050e-20
Identity = 73/215 (33.95%), Postives = 107/215 (49.77%), Query Frame = 1
Query:   55 ESLILQLHEISAVKFGN---FKLKSGISSPVYIDLRLIVSYPSLLRQI----SKTIISSLPFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLI--DREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEENKKVAASNLGGV 672
            E +   L EI AV F     ++L SG++SPVYID R +VSYP +   +    + TI+    F  ++D+V G     +P A  ++    +PM+  RK  K +G    IEG   +    L+IEDL T+G S+ +    +RAAG VV   + L   D     R N+K  G++LH +     ++ V RE    DE+T   V  FL      +  N GGV
Sbjct:   14 ELVAKMLWEIKAVHFRADEPYRLASGMASPVYIDCRKLVSYPRIRSAVMDFAAATILREAGFE-QFDVVAGGETAGIPFAAMLAERLGLPMIYVRKAPKGHGRNAQIEGYMPEGARVLVIEDLTTAGGSMFKFIDAIRAAGGVVEHGIALFYYDIFPEARGNMKSKGVDLHYIATWRNVLAVARELALFDEKTLNEVEAFLNAPLDWSGRN-GGV 226          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_COXBU (Orotate phosphoribosyltransferase OS=Coxiella burnetii GN=pyrE PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.050e-20
Identity = 54/186 (29.03%), Postives = 97/186 (52.15%), Query Frame = 1
Query:   49 SMESLILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFT-TKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDRE-QGGRENLKENGIELHAMIKLSEMVRVLREKGKLDE 600
            +++++ L LHE        ++  SGI SP+Y D RLI+SYP   + I +  +  +      +D+V G     +P A  ++   D+PM+  R + K +G    IEG  +K +  LI+EDL+++G S L   + LR  G+ VTD + +   +    ++N  +  I  HA+     ++ +  ++G +DE
Sbjct:   13 NIKAVTLNLHE-------PYRYTSGILSPIYCDNRLIISYPEKRKMIIEAFLQLIEKNHLSFDIVAGTATAGIPHAAWIADRLDLPMIYVRAKAKTHGKQNQIEGRIRKGQRALIVEDLISTGKSALAAGLALREKGVTVTDCIAIFSYQLPQAQQNFSDANINCHALSHFDTLIEMAVDEGYIDE 191          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_PICTO (Orotate phosphoribosyltransferase OS=Picrophilus torridus GN=pyrE PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.203e-19
Identity = 56/159 (35.22%), Postives = 91/159 (57.23%), Query Frame = 1
Query:   88 AVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEM 564
            A+KFG+F L SG  S  YID++   + P +L +I   I   +    K   + G+   ++PI   VS+    P ++ RK+   +GT     G+   +E   II+D+ T+G S+++ A  +R  G +V  A+ ++DRE+G  E LKEN IEL+++IK SE+
Sbjct:   11 AIKFGDFVLTSGKRSGYYIDIKSAYTDPKILDEIGLEISGMV----KSGKIAGMELGSVPILVSVSIKTKRPFVIIRKDDLKHGTRKRYIGSINLNEEIDIIDDVATTGGSIMKAAEIIRNNGGIVKRAICVVDREEGAAEMLKENNIELYSIIKASEL 165          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_RHIL3 (Orotate phosphoribosyltransferase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=pyrE PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.499e-19
Identity = 66/213 (30.99%), Postives = 106/213 (49.77%), Query Frame = 1
Query:   55 ESLILQLHEISAVKFGN---FKLKSGISSPVYIDLRLIVSYPSLLRQI----SKTIISSLPFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEENKKVAASNLGGV 672
            E L   L EI AV F     +KL SG++SPVYID R ++S+P +   +    + T++    F  ++D + G     +P A  ++    +PM+  RK+ K +G    IEGN  +    L+IEDL T+G S+ +    +RAAG +V   + L      G E   +  + LH +     ++ V +E+   D++T   V  FL+     +  N GGV
Sbjct:   14 ELLAKMLWEIKAVHFNAAQPYKLSSGMASPVYIDCRKLLSFPRIRSTVMDFAASTLLRDAGFE-QFDCIAGGETAGIPFAALLADRLSLPMIYVRKQPKGHGRNAQIEGNMPEGSRVLVIEDLTTAGGSMFKFIDAIRAAGGIVDHGIALFFYGIFGEERFADGKVRLHHIATWRNVLAVAKEQKLFDDKTLSEVEAFLDAPLAWSGRN-GGV 224          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_SULAC (Orotate phosphoribosyltransferase OS=Sulfolobus acidocaldarius GN=pyrE PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.570e-19
Identity = 52/180 (28.89%), Postives = 102/180 (56.67%), Query Frame = 1
Query:  100 GNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEEN 639
            GNF L SG  SP Y+DLR + ++P +   +  + +  +     +D++ GV    +P A+ ++   + PM   R E K +GT   +E +    ++ ++++D+ T+G S+L+    +R AG  V  A+V++DRE+G  E L+  GI L ++ K+SE++  L +   + E  ++++  ++ +N
Sbjct:   16 GNFMLTSGKVSPYYLDLRKLPNHPDIFSFVVSSAVDIVK-GINFDMILGVVTGGVPFASFIACKLNKPMGYIRAEKKGHGTERLLEADVDGKKV-IVVDDVATTGGSILKAVEEVRKAGGKVEHALVIVDREEGAFEKLESVGIRLLSVYKVSEILNSLIKSNLVAENEKKLISDYMVKN 193          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_ANASP (Orotate phosphoribosyltransferase OS=Anabaena sp. (strain PCC 7120) GN=pyrE PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.570e-19
Identity = 61/173 (35.26%), Postives = 96/173 (55.49%), Query Frame = 1
Query:   88 AVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFTTKYDLVCGVPYTALPIATCVSV-----SNDVPMLMRRKEIKDYGTAXAIEG-NFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKG 588
            A K G+F L SG  S  YI+ + +  +P     I + ++S LP  T+   V G+   A PI T VSV     +  +P L+ RKE K +GT   IEG N  +    +++ED+VT+G S ++    LRAAG VV + + L+DR+QGG E  +  G++  A+  + ++ +  +E G
Sbjct:   35 AYKEGDFVLSSGQPSSYYINGKQVTLHPQGALAIGRILLSLLPSDTQ--AVAGLTLGADPIVTAVSVVSAYENRPIPALIIRKEAKGHGTKAYIEGPNLPEGAKVVVLEDVVTTGQSAMKAVDRLRAAGYVVDEVISLVDRQQGGAEFYQSVGLKFEAVFTIMDLQQRYQELG 205          
The following BLAST results are available for this feature:
BLAST of CX043425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 268
Match NameE-valueIdentityDescription
PYRE_ARCFU6.377e-2131.58Orotate phosphoribosyltransferase OS=Archaeoglobus... [more]
PYRE_RHISN8.328e-2133.64Orotate phosphoribosyltransferase OS=Rhizobium sp.... [more]
PYRE_SINMW1.088e-2033.49Orotate phosphoribosyltransferase OS=Sinorhizobium... [more]
PYRE_SULSO5.398e-2028.57Orotate phosphoribosyltransferase OS=Sulfolobus so... [more]
PYRE_RHIME7.050e-2033.95Orotate phosphoribosyltransferase OS=Rhizobium mel... [more]
PYRE_COXBU7.050e-2029.03Orotate phosphoribosyltransferase OS=Coxiella burn... [more]
PYRE_PICTO1.203e-1935.22Orotate phosphoribosyltransferase OS=Picrophilus t... [more]
PYRE_RHIL33.499e-1930.99Orotate phosphoribosyltransferase OS=Rhizobium leg... [more]
PYRE_SULAC4.570e-1928.89Orotate phosphoribosyltransferase OS=Sulfolobus ac... [more]
PYRE_ANASP4.570e-1935.26Orotate phosphoribosyltransferase OS=Anabaena sp. ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11A03_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11A03-A5-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043425 ID=CX043425; Name=CX043425; organism=Citrus sinensis; type=EST; length=672bp
CTTCGTCCCGCTGACAACCCAAAAGGCCGAAATGCAATGTCGTCGAATTC
GATGGAGTCATTGATTCTCCAACTCCACGAGATCTCGGCGGTTAAATTCG
GAAACTTTAAGCTAAAATCCGGCATATCGTCTCCCGTTTACATCGACCTC
CGACTTATCGTTTCTTACCCTTCCCTCCTCCGCCAAATATCCAAAACCAT
CATCTCCTCCCTCCCCTTCACAACCAAATACGACCTCGTGTGCGGCGTTC
CGTACACCGCCCTCCCAATCGCCACCTGCGTCTCCGTCTCCAACGACGTC
CCCATGCTCATGCGGCGCAAGGAAATCAAAGACTACGGCACCGCCNAGGC
CATCGAAGGTAATTTCAAGAAGGACGAAATCTGTCTGATCATCGAAGATT
TAGTCACCAGCGGCGCGTCGGTCCTCGAAACGGCGGTGCCATTGAGAGCG
GCGGGGCTGGTGGTGACGGACGCCGTCGTATTGATCGACAGAGAGCAGGG
AGGGAGGGAGAATCTGAAGGAGAACGGAATTGAGTTGCATGCGATGATAA
AGCTGAGCGAAATGGTTAGGGTTTTGAGGGAGAAAGGGAAGCTTGATGAG
GAAACGGAGAGAGTGGTGATGAAGTTTTTGGAGGAGAACAAGAAAGTGGC
GGCTTCGAATTTAGGTGGGGTT
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