CX043425

Overview
NameCX043425
Unique NameCX043425
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length672
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_RHIEC (Orotate phosphoribosyltransferase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=pyrE PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 5.968e-19
Identity = 65/213 (30.52%), Postives = 107/213 (50.23%), Query Frame = 1
Query:   55 ESLILQLHEISAVKFGN---FKLKSGISSPVYIDLRLIVSYPSLLRQI----SKTIISSLPFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEENKKVAASNLGGV 672
            E +   L EI AV F     +KL SG++SPVYID R ++SYP +   +    + T++    F  ++D + G     +P A  ++    +PM+  RK+ K +G    IEGN  +    L+IEDL T+G S+ +    +RAAG +V   + L   +  G++   +  + LH +     ++ V R +   D++T   V  FL+     +  N GGV
Sbjct:   14 ELVAKMLWEIKAVHFNAAQPYKLSSGMASPVYIDCRKLLSYPRIRSTVMDFAASTLLRDAGFE-QFDCIAGGETAGIPFAALLADRLGLPMIYVRKQPKGHGRNAQIEGNMPEGSRVLVIEDLTTAGGSMFKFIDAVRAAGGIVDHGIALFFYDIFGQQRFTDGKVRLHHIATWRNVLAVARAQQLFDDKTLAEVEAFLDAPLAWSGRN-GGV 224          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_RHILW (Orotate phosphoribosyltransferase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=pyrE PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.330e-18
Identity = 64/212 (30.19%), Postives = 107/212 (50.47%), Query Frame = 1
Query:   55 ESLILQLHEISAVKFGN---FKLKSGISSPVYIDLRLIVSYPSLLRQI----SKTIISSLPFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEENKKVAASNLGG 669
            E +   L EI AV F     +KL SG++SPVYID R ++S+P +   +    + T++    F  ++D + G     +P A  ++    +PM+  RK+ K +G    IEGN  +    L+IEDL T+G S+ +    +RAAG +V   + L   +  G++   +  + LH +     M+ V + +   D++T   V  FL+    +A S L G
Sbjct:   14 ELVAKMLWEIKAVHFNAAQPYKLASGMASPVYIDCRKLLSFPRIRSTVMDFAASTLLRDAGFE-QFDCIAGGETAGIPFAALLADRLGLPMIYVRKQPKGHGRNAQIEGNMPEGSRVLVIEDLTTAGTSMFKFIDAVRAAGGIVDHGIALFFYDIFGQQRFTDGKVRLHHIATWRNMLAVAKAQKLFDDKTLEEVEAFLD--APLAWSGLNG 222          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_PYRKO (Orotate phosphoribosyltransferase OS=Pyrococcus kodakaraensis GN=pyrE PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.330e-18
Identity = 57/184 (30.98%), Postives = 98/184 (53.26%), Query Frame = 1
Query:   43 SNSMESLILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFT-TKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGK 591
            S+S + LI    +  A+ FG F L SG  S  YI+++ + + P  L+ I+K +          +D V G    A+PIAT +++  + P+++ RK+ K +GT   +EG  K  +  L++ED+ T+G SVL  A  L   G  +   +V++DRE+G  E +      L  ++++SE+    +E  K
Sbjct:    2 SDSKDELIRMFFDEEAILFGRFILTSGKESNYYINVKKLSTKPRALKLIAKLMAGEAQKRGITFDRVAGPELGAVPIATALALETEKPLVIVRKKPKGHGTGSQLEGEVKAGDKVLLVEDVTTTGGSVLRAAEVLEREGAEIAAIMVVVDREEGAEETIGAKYTFL-PLVRVSELFARRKEPQK 184          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_RHIE6 (Orotate phosphoribosyltransferase OS=Rhizobium etli (strain CIAT 652) GN=pyrE PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.736e-18
Identity = 64/212 (30.19%), Postives = 105/212 (49.53%), Query Frame = 1
Query:   55 ESLILQLHEISAVKFGN---FKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFTT---KYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEENKKVAASNLGGV 672
            E +   L EI AV F     +KL SG++SPVYID R ++SYP +   +     S+L       ++D + G     +P A  ++    +PM+  RK+ K +G    IEGN  +    L+IEDL T+G S+ +    +RAAG +V   + L   +  G++   +  + LH +     ++ V + +   D++T   V  FL+     +  N GGV
Sbjct:   14 ELVAKMLWEIKAVHFNAGEPYKLSSGMASPVYIDCRKLLSYPRIRSTVMDFAASTLMRDAGFEQFDCIAGGETAGIPFAALLADRLGLPMIYVRKQPKGHGRNAQIEGNMPEGSRVLVIEDLTTAGGSMFKFIDAVRAAGGIVDHGIALFFYDIFGQQRFTDGKVRLHHIATWRNVLAVAKAQQLFDDKTLAEVEAFLDAPLAWSGRN-GGV 224          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_ROSDO (Orotate phosphoribosyltransferase OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=pyrE PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.275e-17
Identity = 59/206 (28.64%), Postives = 100/206 (48.54%), Query Frame = 1
Query:   61 LILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYP----SLLRQISKTIISSLPFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVV--TDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEENKKVAASN 660
            ++L++H +       F L SG+ SP YID R ++S+P    +L+  ++ T++  + F   +D + G     +P A  V+    +PM   RK+ K YG    IEG   + E  L++EDL T G S L     +R  G     T  +   D      + L ++G+ LH++    +++   +++G  DE T   V KFL   +K   +N
Sbjct:   19 MLLEIHAVHFNAKDPFTLSSGLPSPTYIDCRKLISFPRIRATLMDFLTVTVMRDVGFEA-FDNIAGGETAGIPFAALVAERMALPMTYVRKKPKGYGRNARIEGAMGEGERVLLVEDLTTDGGSKLSFVDAIRETGATCGHTAVIFYYDIFPETTKTLGDHGVALHSLCTWWDVLAEAKQQGVFDEATLSEVEKFLHNPRKWQEAN 223          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_LEPBP (Orotate phosphoribosyltransferase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) GN=pyrE PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.586e-17
Identity = 51/159 (32.08%), Postives = 87/159 (54.72%), Query Frame = 1
Query:  106 FKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSL--PFTTKYDLVCGVPYTALPIATCVSVS-----NDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSE 561
            F+L SG+ S  Y + + I  +P  L  +++  I  +      ++  V G+   A PIA  +S+       +V  L+ RKE K +GT   IEG +K  + CL+++D++T+G S L+    LR  G+ VT  + ++DRE+GG ENL+   + + ++   SE
Sbjct:   25 FRLASGLESQHYFNCKEITLHPERLSILAECFIEEIIPKLNIEFQAVGGLTLGADPIAYAISLGYQKRGKNVFPLVVRKESKGHGTGQQIEGFWKDIKTCLVVDDVITTGGSTLKAVKVLREVGINVTKGICILDREEGGSENLQTENVTMTSIFAKSE 183          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_LEPBA (Orotate phosphoribosyltransferase OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) GN=pyrE PE=3 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 5.586e-17
Identity = 51/159 (32.08%), Postives = 87/159 (54.72%), Query Frame = 1
Query:  106 FKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSL--PFTTKYDLVCGVPYTALPIATCVSVS-----NDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSE 561
            F+L SG+ S  Y + + I  +P  L  +++  I  +      ++  V G+   A PIA  +S+       +V  L+ RKE K +GT   IEG +K  + CL+++D++T+G S L+    LR  G+ VT  + ++DRE+GG ENL+   + + ++   SE
Sbjct:   25 FRLASGLESQHYFNCKEITLHPERLSILAECFIEEIIPKLNIEFQAVGGLTLGADPIAYAISLGYQKRGKNVFPLVVRKESKGHGTGQQIEGFWKDIKTCLVVDDVITTGGSTLKAVKVLREVGINVTKGICILDREEGGSENLQTENVTMTSIFAKSE 183          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_SULTO (Orotate phosphoribosyltransferase OS=Sulfolobus tokodaii GN=pyrE PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 9.529e-17
Identity = 52/192 (27.08%), Postives = 98/192 (51.04%), Query Frame = 1
Query:   64 ILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEEN 639
            I  L E   +  GNF L SG  SP Y+DLR + +Y  +        I  +     +D++ G+    +P A+ +S     P+   R E K YGT   +E +    +I L+++D+ T+G S+ +    + + G  V  ++V++DRE+G  + L E G++L ++ K+ E++  L     + +  +  + ++L +N
Sbjct:    4 IKSLVENKLLLIGNFVLTSGKISPYYLDLRRLSNYYEIFSDTVNKAIDKIK-NIDFDMIIGIATGGIPFASFISCRMGKPLGYIRMEKKGYGTDKILEADVSGRKI-LLVDDVATTGGSLSKAVEIINSEGGRVVASLVIVDREEGAEKKLGEYGVKLISVYKIREILEYLLNSSLISDNDKNNIKEYLVKN 193          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_NOCSJ (Orotate phosphoribosyltransferase OS=Nocardioides sp. (strain BAA-499 / JS614) GN=pyrE PE=3 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.244e-16
Identity = 54/155 (34.84%), Postives = 81/155 (52.26%), Query Frame = 1
Query:  100 GNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEM 564
            G F L+SG  +  Y D  L  + P LL ++++ ++  LP  T  DL+ G+    +PIAT VS     P L  RK+ K+YGT    EG         +IED++T+G +V +    LRAAG  V   V  IDR   G   L + G+E+  ++  +E+
Sbjct:   19 GQFTLRSGQQATEYFDKYLFEADPQLLLRVAREMVGLLPDGT--DLLGGLELGGVPIATMVSSLTGRPALYVRKKAKEYGTCKLAEGPDVAGRRVTLIEDVITTGGAVRDATRALRAAGAEVDVVVCAIDRSPAGEHPLADVGLEVRPVLTKAEL 171          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_FUSNN (Orotate phosphoribosyltransferase OS=Fusobacterium nucleatum subsp. nucleatum GN=pyrE PE=3 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.625e-16
Identity = 54/202 (26.73%), Postives = 99/202 (49.01%), Query Frame = 1
Query:   25 GRNAMSSNSMESLI-LQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSL-PFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDRE-QGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVM 621
            G N ++   + +L+ ++  E+   K   F   SGI SP+Y D RL +SYP + +QI++  +  +       D + G     +P A  +S   D+PML  R   KD+G    IEG F+K +  ++IEDL+++G S +  A  L+  GL V   + +        +E   E  I    +     ++ + +E G + ++  ++++
Sbjct:    4 GINMLNREIINALLDIKAVELRVDKENWFTWASGIKSPIYCDNRLTMSYPKIRKQIAEGFVKKINELYPNVDYIVGTATAGIPHAAWISDIMDLPMLYVRGSAKDHGKTNQIEGKFEKGKKVVVIEDLISTGKSSVLAAQALQEEGLEVLGVIAIFSYNLNKAKEKFDEAKIPFSTLTNYDVLLELAKETGLIGDKENQILI 205          
The following BLAST results are available for this feature:
BLAST of CX043425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 268
Match NameE-valueIdentityDescription
PYRE_RHIEC5.968e-1930.52Orotate phosphoribosyltransferase OS=Rhizobium etl... [more]
PYRE_RHILW1.330e-1830.19Orotate phosphoribosyltransferase OS=Rhizobium leg... [more]
PYRE_PYRKO1.330e-1830.98Orotate phosphoribosyltransferase OS=Pyrococcus ko... [more]
PYRE_RHIE61.736e-1830.19Orotate phosphoribosyltransferase OS=Rhizobium etl... [more]
PYRE_ROSDO3.275e-1728.64Orotate phosphoribosyltransferase OS=Roseobacter d... [more]
PYRE_LEPBP5.586e-1732.08Orotate phosphoribosyltransferase OS=Leptospira bi... [more]
PYRE_LEPBA5.586e-1732.08Orotate phosphoribosyltransferase OS=Leptospira bi... [more]
PYRE_SULTO9.529e-1727.08Orotate phosphoribosyltransferase OS=Sulfolobus to... [more]
PYRE_NOCSJ1.244e-1634.84Orotate phosphoribosyltransferase OS=Nocardioides ... [more]
PYRE_FUSNN1.625e-1626.73Orotate phosphoribosyltransferase OS=Fusobacterium... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11A03_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11A03-A5-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043425 ID=CX043425; Name=CX043425; organism=Citrus sinensis; type=EST; length=672bp
CTTCGTCCCGCTGACAACCCAAAAGGCCGAAATGCAATGTCGTCGAATTC
GATGGAGTCATTGATTCTCCAACTCCACGAGATCTCGGCGGTTAAATTCG
GAAACTTTAAGCTAAAATCCGGCATATCGTCTCCCGTTTACATCGACCTC
CGACTTATCGTTTCTTACCCTTCCCTCCTCCGCCAAATATCCAAAACCAT
CATCTCCTCCCTCCCCTTCACAACCAAATACGACCTCGTGTGCGGCGTTC
CGTACACCGCCCTCCCAATCGCCACCTGCGTCTCCGTCTCCAACGACGTC
CCCATGCTCATGCGGCGCAAGGAAATCAAAGACTACGGCACCGCCNAGGC
CATCGAAGGTAATTTCAAGAAGGACGAAATCTGTCTGATCATCGAAGATT
TAGTCACCAGCGGCGCGTCGGTCCTCGAAACGGCGGTGCCATTGAGAGCG
GCGGGGCTGGTGGTGACGGACGCCGTCGTATTGATCGACAGAGAGCAGGG
AGGGAGGGAGAATCTGAAGGAGAACGGAATTGAGTTGCATGCGATGATAA
AGCTGAGCGAAATGGTTAGGGTTTTGAGGGAGAAAGGGAAGCTTGATGAG
GAAACGGAGAGAGTGGTGATGAAGTTTTTGGAGGAGAACAAGAAAGTGGC
GGCTTCGAATTTAGGTGGGGTT
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