CX043425

Overview
NameCX043425
Unique NameCX043425
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length672
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_AGRVS (Orotate phosphoribosyltransferase OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=pyrE PE=3 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 2.772e-16
Identity = 64/214 (29.91%), Postives = 103/214 (48.13%), Query Frame = 1
Query:   55 ESLILQLHEISAVKFGN---FKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFTT---KYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLI--DREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEENKKVAASNLGGV 672
            E L   L EI AV F     +KL SG+ SPVYID R ++SYP +   +    +++L       ++D + G     +P A  ++    +PM+  RK+ K +G    IEG+       L+IEDL T+G S+      +RAAG VV   + L          +  +   ++LH +     ++ V R++   D++T   V  FL+   + +  N GGV
Sbjct:   14 ELLAKMLWEIKAVHFNAAEPYKLASGMRSPVYIDCRKLLSYPRVRSAVMDFAVATLLRNAGFEQFDCIAGGETAGIPFAALLADRLALPMIYVRKQPKGHGRNAQIEGHMPDGARVLVIEDLTTAGGSMFTFIDAVRAAGGVVDHGIALFFYGIFPQAHQRFENGNVKLHYIATWRNVLAVARDQKLFDDKTLSEVESFLDAPLEWSGRN-GGV 226          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_DESAD (Orotate phosphoribosyltransferase OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=pyrE PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.621e-16
Identity = 66/209 (31.58%), Postives = 104/209 (49.76%), Query Frame = 1
Query:   73 LHEISAVKFGN---FKLKSGISSPVYIDLRLIVSYPSLLRQI----SKTIISSLPFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDRE--QGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEENKKVAASNLGGV 672
            L E+ AV F     FK  SG +SPVYID R ++S+P +   +    +  I+  + F +  D V G     +P A  +S    +PM   RK+ K +G    IEG+F +    L++EDL T G S +  A  LR AG  VT   VL         +E L E G+E+ ++    +++ V +++   D ++   V KFL      +A++ GG+
Sbjct:   20 LIEVEAVHFRADEPFKFTSGWASPVYIDCRKLISFPRVRNTLMDFGASVILREVGFES-IDCVAGGETAGIPFAAWLSDRLMLPMQYVRKKPKGFGRDAQIEGDFAEGSKVLLVEDLTTDGRSKINFAQALRKAGAEVTHTFVLFHYGIFPKAKETLAEAGLEMLSLANWWDILNVAKKEKYFDNKSLEEVEKFLNNPVDWSAAH-GGI 226          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_AQUAE (Orotate phosphoribosyltransferase OS=Aquifex aeolicus GN=pyrE PE=3 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.621e-16
Identity = 57/159 (35.85%), Postives = 83/159 (52.20%), Query Frame = 1
Query:  106 FKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFTTKYDLVCGVPYTALPIATCVSV-----SNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMV 567
            FKL SG  S  Y+DL+ I   P     I K +   L      D   G+   A PIA  ++      SN +   + RKE K +G    IEG     E   ++ED+VT+G+S L+     R  GL V     ++DRE+GGREN+++ GI L+++ KLSE++
Sbjct:   26 FKLSSGKLSRYYVDLKQITFDPEGDYLIGKAMYE-LVKEFNPDACGGLTLGADPIAYAIAFVSLMDSNPIKPFVVRKEPKGHGMKRQIEGLLNPGERVAVLEDVVTTGSSALKAVKACREYGLEVIGVFAVVDREEGGRENIEKEGIPLYSLFKLSELL 183          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_LACLS (Orotate phosphoribosyltransferase OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=pyrE PE=3 SV=1)

HSP 1 Score: 84.7297 bits (208), Expect = 4.729e-16
Identity = 51/205 (24.88%), Postives = 99/205 (48.29%), Query Frame = 1
Query:   43 SNSMESLILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQI----SKTIISSLPFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDRE-QGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEENK 642
            S ++ + +L++  +S      F   SGI SP+Y D R+ ++YP +  QI    ++ I +  P   + +++ G     +P    ++    +P    R + KD+G    +EG   K +  +++EDL+++G SVLE        G  V   V +   E +       E+G++L  +   SE++ + +E G + +E   ++ KF E  +
Sbjct:    4 SKAIAADLLEIKAVSLSPSQPFTWASGIKSPIYTDNRVTLAYPEVRSQIEGAFAELIKAEFP---EVEVIAGTATAGIPHGAIIADYLKLPFAYIRSKPKDHGAGNQVEGRVAKGQKMVVVEDLISTGGSVLEAVAAAEREGADVLGVVAIFTYELEKANSKFAESGVKLATLTNYSELIEIAKETGYVTKEELELLKKFKENQE 205          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_RHILT (Orotate phosphoribosyltransferase OS=Rhizobium leguminosarum bv. trifolii GN=pyrE PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.066e-16
Identity = 59/193 (30.57%), Postives = 93/193 (48.19%), Query Frame = 1
Query:   55 ESLILQLHEISAVKFGN---FKLKSGISSPVYIDLRLIVSYPSLLRQI----SKTIISSLPFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETER 612
            E L   L EI AV F     +KL SG++SPVYID R ++S+P +   +    + T++    F  ++D + G     +P A  ++    +PM+  RK+ K +G    IEGN  +    L+IEDL T+G S+ +    +RAAG +V   + L      G +   +  + LH    ++    VL   G     T R
Sbjct:   14 ELLAKMLWEIKAVHFNAAQPYKLASGMASPVYIDCRKLLSFPRIRSTVMDFAASTLLRDAGFE-QFDCIAGGETAGIPFAALLADRLGLPMIYVRKQPKGHGRNAQIEGNMPEGSRVLVIEDLTTAGGSMFKFIDAVRAAGGIVDHGIALFFYGIFGEQRFADGKVRLH---HIATWRNVLPSPGSRSSSTTR 202          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_LISMO (Orotate phosphoribosyltransferase OS=Listeria monocytogenes GN=pyrE PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.066e-16
Identity = 63/197 (31.98%), Postives = 100/197 (50.76%), Query Frame = 1
Query:   70 QLHEISAVKFGN---FKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFTT-KYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGL-VVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEENKK 645
            QL EI AV       F   SGI SP+Y D RL + +P + + I+K++   +  T  + D+V G     +P A  VS   D+PM+  R + K++G    IEG   K +  ++IEDL+++G S L+    L  AG  VV  A +       G++ L+E+G +L  +    E++ V   +  +  E     M+ L+E KK
Sbjct:   10 QLLEIKAVFLKPNEPFTWASGIKSPIYCDNRLTLGFPKVRQFIAKSLAEKIKQTFGEIDVVAGTATAGIPHAAWVSDLLDLPMVYVRSKAKEHGKGNQIEGPISKGQKVVVIEDLISTGGSSLKAVEALEEAGAEVVGIAAIFTYGLAKGKQLLEESGTKLVTLTNYDELIEVALNENYVTGED----METLKEWKK 202          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_LISMF (Orotate phosphoribosyltransferase OS=Listeria monocytogenes serotype 4b (strain F2365) GN=pyrE PE=3 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.066e-16
Identity = 63/197 (31.98%), Postives = 100/197 (50.76%), Query Frame = 1
Query:   70 QLHEISAVKFGN---FKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFTT-KYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGL-VVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEENKK 645
            QL EI AV       F   SGI SP+Y D RL + +P + + I+K++   +  T  + D+V G     +P A  VS   D+PM+  R + K++G    IEG   K +  ++IEDL+++G S L+    L  AG  VV  A +       G++ L+E+G +L  +    E++ V   +  +  E     M+ L+E KK
Sbjct:   10 QLLEIKAVFLKPNEPFTWASGIKSPIYCDNRLTLGFPKVRQFIAKSLAEKIKQTFGEVDVVAGTATAGIPHAAWVSDLLDLPMVYVRSKAKEHGKGNQIEGPISKGQKVVVIEDLISTGGSSLKAVEALEEAGAEVVGIAAIFTYGLAKGKQLLEESGTKLVTLTNYDELIEVALNENYVTGED----METLKEWKK 202          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_STRPG (Orotate phosphoribosyltransferase OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=pyrE PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.054e-15
Identity = 55/194 (28.35%), Postives = 93/194 (47.94%), Query Frame = 1
Query:   70 QLHEISAVKF---GNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSL-PFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDRE-QGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEE 636
            QL +I AV       F   SGI SP+Y D R+ +SYP     I    + ++     + +++ G     +P    ++    +P    R ++KD+G    IEG   K +  +IIEDL+++G SVL+ A      G  V   V +   E     +N KE GI+L  +   +E++ V + +G +  +   ++ KF E+
Sbjct:   10 QLLDIKAVYLKPEDPFTWASGIKSPIYTDNRVTLSYPKTRDLIENGFVETIRAHFPEVEVIAGTATAGIPHGAIIADKMTLPFAYIRSKLKDHGAGNQIEGRVLKGQKMVIIEDLISTGGSVLDAAAAASREGADVLGVVAIFTYELPKASQNFKEAGIKLITLSNYTELIAVAKLQGYITNDGLHLLKKFKED 203          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_STRT2 (Orotate phosphoribosyltransferase OS=Streptococcus thermophilus (strain ATCC BAA-250 / LMG 18311) GN=pyrE PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.797e-15
Identity = 48/181 (26.52%), Postives = 86/181 (47.51%), Query Frame = 1
Query:  106 FKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFT-TKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDRE-QGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEENK 642
            F   SGI SP+Y D R+ +SYP     I    +  +     + +++ G     +P    ++   ++P    R + KD+G    IEG   K E  +++EDL+++G SVL+        G  V   V +   E     +N  E G++L  +   +E+++V + KG +  +  R++ KF E  +
Sbjct:   25 FTWASGIKSPIYTDNRITLSYPETRTLIENGFVKKIKEEFPEVEVIAGTATAGIPHGAIIADKMNLPFAYIRSKPKDHGAGNQIEGRVVKGEKMVVVEDLISTGGSVLDAVAAAEREGADVIGVVAIFTYELPKAEKNFAEAGVKLVTLSNYTELIKVAKVKGYITADGLRLLKKFKENQE 205          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_STRT1 (Orotate phosphoribosyltransferase OS=Streptococcus thermophilus (strain CNRZ 1066) GN=pyrE PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 1.797e-15
Identity = 48/181 (26.52%), Postives = 86/181 (47.51%), Query Frame = 1
Query:  106 FKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFT-TKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDRE-QGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEENK 642
            F   SGI SP+Y D R+ +SYP     I    +  +     + +++ G     +P    ++   ++P    R + KD+G    IEG   K E  +++EDL+++G SVL+        G  V   V +   E     +N  E G++L  +   +E+++V + KG +  +  R++ KF E  +
Sbjct:   25 FTWASGIKSPIYTDNRITLSYPETRTLIENGFVKKIKEEFPEVEVIAGTATAGIPHGAIIADKMNLPFAYIRSKPKDHGAGNQIEGRVVKGEKMVVVEDLISTGGSVLDAVAAAEREGADVIGVVAIFTYELPKAEKNFAEAGVKLVTLSNYTELIKVAKVKGYITADGLRLLKKFKENQE 205          
The following BLAST results are available for this feature:
BLAST of CX043425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 268
Match NameE-valueIdentityDescription
PYRE_AGRVS2.772e-1629.91Orotate phosphoribosyltransferase OS=Agrobacterium... [more]
PYRE_DESAD3.621e-1631.58Orotate phosphoribosyltransferase OS=Desulfovibrio... [more]
PYRE_AQUAE3.621e-1635.85Orotate phosphoribosyltransferase OS=Aquifex aeoli... [more]
PYRE_LACLS4.729e-1624.88Orotate phosphoribosyltransferase OS=Lactococcus l... [more]
PYRE_RHILT8.066e-1630.57Orotate phosphoribosyltransferase OS=Rhizobium leg... [more]
PYRE_LISMO8.066e-1631.98Orotate phosphoribosyltransferase OS=Listeria mono... [more]
PYRE_LISMF8.066e-1631.98Orotate phosphoribosyltransferase OS=Listeria mono... [more]
PYRE_STRPG1.054e-1528.35Orotate phosphoribosyltransferase OS=Streptococcus... [more]
PYRE_STRT21.797e-1526.52Orotate phosphoribosyltransferase OS=Streptococcus... [more]
PYRE_STRT11.797e-1526.52Orotate phosphoribosyltransferase OS=Streptococcus... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11A03_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11A03-A5-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043425 ID=CX043425; Name=CX043425; organism=Citrus sinensis; type=EST; length=672bp
CTTCGTCCCGCTGACAACCCAAAAGGCCGAAATGCAATGTCGTCGAATTC
GATGGAGTCATTGATTCTCCAACTCCACGAGATCTCGGCGGTTAAATTCG
GAAACTTTAAGCTAAAATCCGGCATATCGTCTCCCGTTTACATCGACCTC
CGACTTATCGTTTCTTACCCTTCCCTCCTCCGCCAAATATCCAAAACCAT
CATCTCCTCCCTCCCCTTCACAACCAAATACGACCTCGTGTGCGGCGTTC
CGTACACCGCCCTCCCAATCGCCACCTGCGTCTCCGTCTCCAACGACGTC
CCCATGCTCATGCGGCGCAAGGAAATCAAAGACTACGGCACCGCCNAGGC
CATCGAAGGTAATTTCAAGAAGGACGAAATCTGTCTGATCATCGAAGATT
TAGTCACCAGCGGCGCGTCGGTCCTCGAAACGGCGGTGCCATTGAGAGCG
GCGGGGCTGGTGGTGACGGACGCCGTCGTATTGATCGACAGAGAGCAGGG
AGGGAGGGAGAATCTGAAGGAGAACGGAATTGAGTTGCATGCGATGATAA
AGCTGAGCGAAATGGTTAGGGTTTTGAGGGAGAAAGGGAAGCTTGATGAG
GAAACGGAGAGAGTGGTGATGAAGTTTTTGGAGGAGAACAAGAAAGTGGC
GGCTTCGAATTTAGGTGGGGTT
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