CX043425

Overview
NameCX043425
Unique NameCX043425
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length672
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_STRP1 (Orotate phosphoribosyltransferase OS=Streptococcus pyogenes serotype M1 GN=pyrE PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.003e-15
Identity = 55/194 (28.35%), Postives = 92/194 (47.42%), Query Frame = 1
Query:   70 QLHEISAVKF---GNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLP-FTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDRE-QGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEE 636
            QL +I AV       F   SGI SP+Y D R+ +SYP     I    + ++     + +++ G     +P    ++    +P    R + KD+G    IEG   K +  +IIEDL+++G SVL+ A      G  V   V +   E     +N KE GI+L  +   +E++ V + +G +  +   ++ KF E+
Sbjct:   10 QLLDIKAVYLKPEDPFTWASGIKSPIYTDNRVTLSYPKTRDLIENGFVETIKAHFPEVEVIAGTATAGIPHGAIIADKMTLPFAYIRSKPKDHGAGNQIEGRVLKGQKMVIIEDLISTGGSVLDAAAAASREGADVLGVVAIFTYELPKASQNFKEAGIKLITLSNYTELIAVAKLQGYITNDGLHLLKKFKED 203          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_LACJO (Orotate phosphoribosyltransferase OS=Lactobacillus johnsonii GN=pyrE PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.003e-15
Identity = 54/182 (29.67%), Postives = 89/182 (48.90%), Query Frame = 1
Query:  106 FKLKSGISSPVYIDLRLIVSYPSLLRQI----SKTIISSLPFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETA-VPLRAAGLVVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEE 636
            F   SG+ SP+Y DLRL VSYP L   I    S  I +  P  T   ++ GV    +P A  V+    +PM+  R + KD+G    IEG F +++  ++I+DL+T+G SVL       +  G V   A +        +EN KE  ++   ++   E+++   E G +  +   ++  + E+
Sbjct:   24 FTYASGMLSPIYTDLRLTVSYPDLRDMIASDLSNLIAAEFPQAT---IIGGVATAGIPHAALVAEKLHLPMIYVRPKPKDHGKGRQIEGRFSENDQIVLIDDLITTGGSVLNAVKATEKDGGKVAGVASIFTYYLPDAKENFKEANVKYTPLLSYPELLKKENESGHITSDQYDILKTWHED 202          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_AGRT5 (Orotate phosphoribosyltransferase OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=pyrE PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.003e-15
Identity = 65/216 (30.09%), Postives = 101/216 (46.76%), Query Frame = 1
Query:   55 ESLILQLHEISAVKFGN---FKLKSGISSPVYIDLRLIVSYP---SLLRQISKTIISSLPFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVL----IDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEENKKVAASNLGGV 672
            E +   L EI AV F +   +   SG+ SPVYID+R ++S+P   S     +   +       K+D V G     +P A  ++    +PM+  RK+ K +G    IEG+       L+IEDL T+G S+      +RAAG +V   + L    I  E   R       ++LH +    +++ V R +   DE+T   V  FL+     +A + GGV
Sbjct:   14 ELVAKMLWEIKAVHFNSESPYTFASGMKSPVYIDMRKLISFPRIRSAAMDFAAAAVMREAGFEKFDCVAGGETAGIPFAAFLAERLGLPMIYCRKKPKGHGRNAQIEGHMPDGARVLVIEDLTTAGGSMFTFIDAIRAAGGIVDHGIALFYYGIFEEAEAR--FANGNVKLHYLTTWRDVLAVARAEKLFDEKTLSGVEAFLDNPLPWSAKH-GGV 226          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_STRTD (Orotate phosphoribosyltransferase OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=pyrE PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.228e-15
Identity = 47/181 (25.97%), Postives = 86/181 (47.51%), Query Frame = 1
Query:  106 FKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFT-TKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDRE-QGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEENK 642
            F   SGI SP+Y D R+ +SYP     I    +  +     + +++ G     +P    ++   ++P    R + KD+G    IEG   K E  +++EDL+++G SVL+        G  V   V +   E     +N  E G++L  +   +E+++V + KG +  +  +++ KF E  +
Sbjct:   25 FTWASGIKSPIYTDNRITLSYPETRTLIENGFVKKIKEEFPEVEVIAGTATAGIPHGAIIADKMNLPFAYIRSKPKDHGAGNQIEGRVVKGEKMVVVEDLISTGGSVLDAVAAAEREGADVIGVVAIFTYELPKAEKNFAEAGVKLVTLSNYTELIKVAKVKGYITADGLQLLKKFKENQE 205          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_STRPD (Orotate phosphoribosyltransferase OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=pyrE PE=3 SV=1)

HSP 1 Score: 81.2629 bits (199), Expect = 5.228e-15
Identity = 50/179 (27.93%), Postives = 86/179 (48.04%), Query Frame = 1
Query:  106 FKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSL-PFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDRE-QGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEE 636
            F   SGI SP+Y D R+ +SYP     I    + ++     + +++ G     +P    ++    +P    R + KD+G    IEG   K +  +IIEDL+++G SVL+ A      G  V   V +   E     +N KE GI+L  +   +E++ V + +G +  +   ++ KF E+
Sbjct:   25 FTWASGIKSPIYTDNRVTLSYPKTRDLIENGFVETIRAHFPEVEVIAGTATAGIPHGAIIADKMTLPFAYIRSKPKDHGAGNQIEGRVLKGQKMVIIEDLISTGGSVLDAAAAASREGADVLGVVAIFTYELPKASQNFKEAGIKLITLSNYTELIAVAKLQGYITNDGLHLLKKFKED 203          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_VESOH (Orotate phosphoribosyltransferase OS=Vesicomyosocius okutanii subsp. Calyptogena okutanii (strain HA) GN=pyrE PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 8.918e-15
Identity = 55/190 (28.95%), Postives = 101/190 (53.16%), Query Frame = 1
Query:   55 ESLILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFT-TKYDLVCGVPYTALPIATCVSVS------NDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGR------ENLKEN-GIELHAMIKLSEMVRVLRE 582
            E  +  + +  A+KFGNF LKSG  SP + ++  + +    L Q+ K    ++  +   +D++ G  Y  +P+ T  +V+       DV     RKE+K YG    I G+  +  I LII+D++T+G ++ E    ++A G  V   +V +DR++ G+      + +++N GI + ++I LS +V  L++
Sbjct:    6 EDFVEFILDSGALKFGNFTLKSGRISPYFFNVG-VFNTGQYLSQLGKFYAIAIENSGLDFDVLFGPSYKGIPLVTATAVAFNNNFNKDVSYSFNRKEVKTYGEGGGIVGHSLEGNI-LIIDDVITAGTAIHEAVDIIKANGATVKGVIVAVDRQEKGKSGQSAIQEVEQNFGISVFSIINLSNVVDYLKQ 193          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_DINSH (Orotate phosphoribosyltransferase OS=Dinoroseobacter shibae (strain DFL 12) GN=pyrE PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 8.918e-15
Identity = 59/197 (29.95%), Postives = 91/197 (46.19%), Query Frame = 1
Query:   73 LHEISAVKFGN---FKLKSGISSPVYIDLRLIVSYP----SLLRQISKTIISSLPFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDRE--QGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEE 636
            L EI AV F     F L SG+ SP YID R ++S+P    +L+  ++ T++    F   +D + G     +P    V+    +PM   RK+ K YG    IEG  ++ E  L++EDL T G S L+    +R  G       V+           +L   G++LH +    +++   R +G  D ET   V  FL +
Sbjct:   20 LLEIEAVHFNAREPFILASGLPSPTYIDCRKLISFPRIRSTLMDFLTVTVMREAGFEA-FDNIAGGETAGIPFGALVAERLALPMTYVRKKPKGYGRDAQIEGVMREGERVLLVEDLTTDGGSKLKFVEAIRKTGATCGHTAVIFSYGIFPETESSLAAEGVKLHHLCTWWDVLAEARARGSFDPETLGAVETFLND 215          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_VIBFM (Orotate phosphoribosyltransferase OS=Vibrio fischeri (strain MJ11) GN=pyrE PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.165e-14
Identity = 53/192 (27.60%), Postives = 96/192 (50.00%), Query Frame = 1
Query:   79 EISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFTTKYDLVCGVPYTALPIATCVSVS------NDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENL-------KENGIELHAMIKLSEMVRVLREKGKLDEETERV 615
            E   +KFG F LKSG  SP + +  L  +   L R       +      +YD++ G  Y  +PIAT  +V+       D P    RKE KD+G    + G+  +  I ++++D++T+G ++ E+   ++A G  +   +V IDR++ G+  L       ++    + +++ L++++  L EKG   E+ E V
Sbjct:   14 EKEVLKFGEFTLKSGRKSPYFFNAGLFNTGRDLARLGRFYAAALADSGIEYDVLFGPAYKGIPIATTTAVALADHHDTDKPYCFNRKEAKDHGEGGNLVGSALEGRI-MLVDDVITAGTAIRESMEIIQANGADLAGVLVAIDRQEKGKGELSAIQEVERDFNCSIISIVSLTDLISFLEEKGDNAEQLEAV 204          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_SILST (Orotate phosphoribosyltransferase OS=Silicibacter sp. (strain TM1040) GN=pyrE PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.165e-14
Identity = 60/205 (29.27%), Postives = 96/205 (46.83%), Query Frame = 1
Query:   73 LHEISAVKFGN---FKLKSGISSPVYIDLRLIVSYP----SLLRQISKTIISSLPFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVV--TDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEENKKVAASN 660
            L EI AV F     + L SG+ SP YID R ++S+P    +L+  ++ T++ +  F   +D + G     +P A  V+    +PM   RK+ K YG    IEG   + E  L++EDL T G S L     +R  G     T  +   D      + L ++G++LH +    +++   R +     ET   V KFL + +    +N
Sbjct:   20 LLEIGAVNFNTDEPYTLASGLPSPSYIDCRKLISFPRIRSTLMDFMAVTVMRNAGFEA-FDNIAGGETAGIPFAALVAERLALPMTYVRKKPKGYGRNARIEGAMSEGERVLLVEDLTTDGGSKLSFVDAIRETGATCGHTAVIFYYDIFPETTKTLGDHGVQLHYLCTWWDVLAEARAQAAFSTETLDEVEKFLRDPRAWQEAN 223          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_MARAV (Orotate phosphoribosyltransferase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=pyrE PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.165e-14
Identity = 54/190 (28.42%), Postives = 101/190 (53.16%), Query Frame = 1
Query:   85 SAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFT-TKYDLVCGVPYTALPIATCVSVS-----NDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENL-------KENGIELHAMIKLSEMVRVLREKGKLDEETERV 615
            + ++FG F LKSG +SP + +  L  +   LL ++SK   +++  +   YD++ G  Y  +P+AT  +++     N  P    RKE KD+G    I G   + ++ LI++D++T+G ++ E+   +RAAG      ++ +DR++ G   L       KE GI + ++I+L +++  L+   +     E V
Sbjct:   16 NVLRFGEFTLKSGRTSPYFFNAGLFNTGNDLL-ELSKAYAAAIARSGLDYDIIFGPAYKGIPLATVTAMALATDGNSKPFAFNRKEKKDHGEGGNIVGAPLQGKV-LIVDDVITAGTAIRESIDIIRAAGAEPAGVLIALDRQEKGNGELSAIQEVEKEFGIPVVSIIRLEQVLDYLKSNPEFAGHAENV 203          
The following BLAST results are available for this feature:
BLAST of CX043425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 268
Match NameE-valueIdentityDescription
PYRE_STRP14.003e-1528.35Orotate phosphoribosyltransferase OS=Streptococcus... [more]
PYRE_LACJO4.003e-1529.67Orotate phosphoribosyltransferase OS=Lactobacillus... [more]
PYRE_AGRT54.003e-1530.09Orotate phosphoribosyltransferase OS=Agrobacterium... [more]
PYRE_STRTD5.228e-1525.97Orotate phosphoribosyltransferase OS=Streptococcus... [more]
PYRE_STRPD5.228e-1527.93Orotate phosphoribosyltransferase OS=Streptococcus... [more]
PYRE_VESOH8.918e-1528.95Orotate phosphoribosyltransferase OS=Vesicomyosoci... [more]
PYRE_DINSH8.918e-1529.95Orotate phosphoribosyltransferase OS=Dinoroseobact... [more]
PYRE_VIBFM1.165e-1427.60Orotate phosphoribosyltransferase OS=Vibrio fische... [more]
PYRE_SILST1.165e-1429.27Orotate phosphoribosyltransferase OS=Silicibacter ... [more]
PYRE_MARAV1.165e-1428.42Orotate phosphoribosyltransferase OS=Marinobacter ... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS07_11A03_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11A03-A5-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043425 ID=CX043425; Name=CX043425; organism=Citrus sinensis; type=EST; length=672bp
CTTCGTCCCGCTGACAACCCAAAAGGCCGAAATGCAATGTCGTCGAATTC
GATGGAGTCATTGATTCTCCAACTCCACGAGATCTCGGCGGTTAAATTCG
GAAACTTTAAGCTAAAATCCGGCATATCGTCTCCCGTTTACATCGACCTC
CGACTTATCGTTTCTTACCCTTCCCTCCTCCGCCAAATATCCAAAACCAT
CATCTCCTCCCTCCCCTTCACAACCAAATACGACCTCGTGTGCGGCGTTC
CGTACACCGCCCTCCCAATCGCCACCTGCGTCTCCGTCTCCAACGACGTC
CCCATGCTCATGCGGCGCAAGGAAATCAAAGACTACGGCACCGCCNAGGC
CATCGAAGGTAATTTCAAGAAGGACGAAATCTGTCTGATCATCGAAGATT
TAGTCACCAGCGGCGCGTCGGTCCTCGAAACGGCGGTGCCATTGAGAGCG
GCGGGGCTGGTGGTGACGGACGCCGTCGTATTGATCGACAGAGAGCAGGG
AGGGAGGGAGAATCTGAAGGAGAACGGAATTGAGTTGCATGCGATGATAA
AGCTGAGCGAAATGGTTAGGGTTTTGAGGGAGAAAGGGAAGCTTGATGAG
GAAACGGAGAGAGTGGTGATGAAGTTTTTGGAGGAGAACAAGAAAGTGGC
GGCTTCGAATTTAGGTGGGGTT
back to top