CX043425

Overview
NameCX043425
Unique NameCX043425
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length672
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_BACWK (Orotate phosphoribosyltransferase OS=Bacillus weihenstephanensis (strain KBAB4) GN=pyrE PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.165e-14
Identity = 52/174 (29.89%), Postives = 90/174 (51.72%), Query Frame = 1
Query:  106 FKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLP--FTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDRE-QGGRENLKENGIELHAMIKLSEMVRVLREKGKLDE-ETERV 615
            F   SGI SP+Y D RL +SYP + + I+  +   +   F+T  +++ G     +  A  VS   D+PM   R + K +G    IEG  +K +  +++EDL+++G S +     LR AG  V   V +   E + G+E L+   +  +++   S +  V  EKG + + ET+++
Sbjct:   23 FTWSSGIKSPIYCDNRLTLSYPKVRQAIAAGLEELIKEHFST-VEVIAGTATAGIAHAAWVSDRMDLPMCYVRSKAKGHGKGNQIEGKAEKGQKVVVVEDLISTGGSAITCVEALREAGCEVLGIVSIFTYELESGKEKLEAANVASYSLSDYSALTEVAAEKGMIGQAETKKL 195          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_STRMU (Orotate phosphoribosyltransferase OS=Streptococcus mutans GN=pyrE PE=1 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.521e-14
Identity = 47/181 (25.97%), Postives = 87/181 (48.07%), Query Frame = 1
Query:  106 FKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFT-TKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDRE-QGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEENK 642
            F   SGI SP+Y D R+ +SYP     I    + ++     + +++ G     +P    ++   ++P    R + KD+G    IEG   K +  +IIEDL+++G SVL+     +  G  V   V +   E      N ++  ++L  +   SE+++V + +G +D +   ++ KF E  +
Sbjct:   25 FTWASGIKSPIYTDNRITLSYPETRTLIENGFVETIKEAFPEVEVIAGTATAGIPHGAIIADKMNLPFAYIRSKPKDHGAGNQIEGRVTKGQKMVIIEDLISTGGSVLDAVAAAQREGADVLGVVAIFTYELPKATANFEKASVKLVTLSNYSELIKVAKVQGYIDADGLTLLKKFKENQE 205          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_LISIN (Orotate phosphoribosyltransferase OS=Listeria innocua GN=pyrE PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.521e-14
Identity = 59/198 (29.80%), Postives = 99/198 (50.00%), Query Frame = 1
Query:   70 QLHEISAVKFGN---FKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFTT-KYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGL-VVTDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEENKKV 648
            QL EI AV       F   SGI SP+Y D RL + +P + + I+K++   +     + D+V G     +P A  VS   D+PM+  R + K++G    IEG   K +  ++IEDL+++G S L+    L  AG  V+  A +       G++ L+E+  +L  +    E++ V   K  +  E +   +K  ++N +V
Sbjct:   10 QLLEIKAVFLKPNEPFTWASGIKSPIYCDNRLTLGFPKVRQFIAKSLAEKIKENFGEVDVVAGTATAGIPHAAWVSDLLDLPMVYVRSKAKEHGKGNQIEGPLTKGQKVVVIEDLISTGGSSLKAVEALEEAGAEVLGIAAIFTYGLDKGKKLLEESNTKLVTLTNYDELIEVALNKNYVTTE-DMATLKEWKKNPEV 206          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_LACLM (Orotate phosphoribosyltransferase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=pyrE PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.521e-14
Identity = 49/205 (23.90%), Postives = 97/205 (47.32%), Query Frame = 1
Query:   43 SNSMESLILQLHEISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQI----SKTIISSLPFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDRE-QGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEENK 642
            S ++ + +L++  +S      F   SGI SP+Y D R+ ++YP +  QI    ++ I +  P   + +++ G     +P    ++    +P    R + KD+G    +EG   K +  +++EDL+++G SVLE        G  V   V +   E +       +  ++L  +   SE++ + +E G + +E   ++ KF E  +
Sbjct:    4 SKAIAADLLEIKAVSLSPSQPFTWASGIKSPIYTDNRVTLAYPEVRSQIEGAFAELIKTEFP---EVEVIAGTATAGIPHGAIIADYLKLPFAYIRSKPKDHGAGNQVEGRVAKGQKMVVVEDLISTGGSVLEAVAAAEREGADVLGVVAIFTYELEKANSKFADADVKLATLTNYSELIEIAKETGYVTKEELELLKKFKENQE 205          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_STRPN (Orotate phosphoribosyltransferase OS=Streptococcus pneumoniae GN=pyrE PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.595e-14
Identity = 44/181 (24.31%), Postives = 88/181 (48.62%), Query Frame = 1
Query:  106 FKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFT-TKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDRE-QGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEENK 642
            F   SGI SP+Y D R+ ++YP     I    + ++     + +++ G     +P    ++   D+P    R + KD+G    IEG   + +  +++EDL+++G SVLE     +  G  V   V +   +     +N  + G++L  +   SE++ + +E+G +  E   ++ +F E+ +
Sbjct:   25 FTWASGIKSPIYTDNRVTLAYPETRTLIENGFVEAIKEAFPEVEVIAGTATAGIPHGAIIADKMDLPFAYIRSKPKDHGAGNQIEGRVAQGQKMVVVEDLISTGGSVLEAVAAAKREGADVLGVVAIFSYQLPKADKNFADAGVKLVTLSNYSELIHLAQEEGYITPEGLDLLKRFKEDQE 205          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_BACC4 (Orotate phosphoribosyltransferase OS=Bacillus cereus (strain B4264) GN=pyrE PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.595e-14
Identity = 55/187 (29.41%), Postives = 93/187 (49.73%), Query Frame = 1
Query:  106 FKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLP--FTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDRE-QGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEENKKVAAS 657
            F   SG+ SP+Y D RL +SYP + + I+  +   +   F T  +++ G     +  A  VS   D+PM   R + K +G    IEG  +K +  +++EDL+++G S +     LR AG  V   V +   E + G+E L+   +  +++   S +  V  EKG + +      MK L+E +K  A+
Sbjct:   23 FTWSSGMKSPIYCDNRLTLSYPKVRQAIAAGLEELIKEHFPT-VEVIAGTATAGIAHAAWVSDRMDLPMCYVRSKAKGHGKGNQIEGKAEKGQKVVVVEDLISTGGSAITCVEALREAGCEVLGIVSIFTYELEAGKEKLEAANVVSYSLSDYSALTEVAAEKGMIGQ----AEMKKLQEWRKNPAN 204          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_VIBPA (Orotate phosphoribosyltransferase OS=Vibrio parahaemolyticus GN=pyrE PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.389e-14
Identity = 52/192 (27.08%), Postives = 95/192 (49.48%), Query Frame = 1
Query:   79 EISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFTTKYDLVCGVPYTALPIATCVSVSN------DVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENL-------KENGIELHAMIKLSEMVRVLREKGKLDEETERV 615
            E   +KFG F LKSG  SP + +  L  +   L R       +      ++D++ G  Y  +PIAT  +V+       D P    RKE K++G    + G+  +  I ++++D++T+G ++ E+   ++A G  +   +V IDR++ G+  L       ++ G  + +++ L +++  L EKG   E  E V
Sbjct:   14 EKEVLKFGEFTLKSGRKSPYFFNAGLFNTGRDLARLGRFYAAALADSGIEFDVLFGPAYKGIPIATTTAVALADHHDIDTPYCFNRKEAKNHGEGGNLVGSALEGRI-MLVDDVITAGTAIRESMEIIKANGADLAGVLVAIDRQEKGKGELSAIQEVERDFGCAVISIVSLGDLITYLEEKGNATEHLEAV 204          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_SILPO (Orotate phosphoribosyltransferase OS=Silicibacter pomeroyi GN=pyrE PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.389e-14
Identity = 60/205 (29.27%), Postives = 97/205 (47.32%), Query Frame = 1
Query:   73 LHEISAVKFGN---FKLKSGISSPVYIDLRLIVSYP----SLLRQISKTIISSLPFTTKYDLVCGVPYTALPIATCVSVSNDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVV--TDAVVLIDREQGGRENLKENGIELHAMIKLSEMVRVLREKGKLDEETERVVMKFLEENKKVAASN 660
            L EI AV F     + L SG+ SP YID R ++S+P    +L+  ++ T++ +  F   +D + G     +P A  V+    +PM   RK+ K YG    IEG   + +  L++EDL T G S L     +R  G     T  +   D      + L ++G+ LH +    +++   R +   DE T   V  FL++ +   A+N
Sbjct:   20 LLEIGAVNFNTKEPYILASGLPSPSYIDCRKLISFPRIRSTLMDFLTVTVMRNAGFEA-FDNIAGGETAGIPFAALVAERMALPMTYVRKKPKGYGRNARIEGAMSEGQRVLLVEDLTTDGGSKLSFVDAIRETGASCGHTAVIFYYDIFPETEKTLGDHGVALHYLCTWWDVLAEARAQKAFDEVTLSGVEAFLKDPRAWQAAN 223          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_SHEON (Orotate phosphoribosyltransferase OS=Shewanella oneidensis GN=pyrE PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.389e-14
Identity = 51/192 (26.56%), Postives = 98/192 (51.04%), Query Frame = 1
Query:   79 EISAVKFGNFKLKSGISSPVYIDLRLIVSYPSLLRQISKTIISSLPFTTKYDLVCGVPYTALPIATCVSVSN------DVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENL-------KENGIELHAMIKLSEMVRVLREKGKLDEETERV 615
            E   ++FG F LKSG  SP + +  L  +   L R       + +     YDL+ G  Y  +PIAT  +V+       D+P    RKE KD+G   ++ G+  K  + ++++D++T+G ++ E+   + A    +   ++ +DR++ G+  L       ++ G  + A+IKL++++  L EK +++ +   V
Sbjct:   14 ERQVLRFGEFTLKSGRISPYFFNAGLFNTGRDLARLGRFYAAALVDSGIDYDLLFGPAYKGIPIATTTAVALCEHHNIDIPYCFNRKEKKDHGEGGSLVGSELKGRV-MLVDDVITAGTAIRESMEIIEAHQAQLAGVLIALDRQEKGKGELSAIQEVERDFGCGIVAIIKLADLISYLSEKPRMEAQLAAV 204          
BLAST of CX043425 vs. ExPASy Swiss-Prot
Match: PYRE_SALAR (Orotate phosphoribosyltransferase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=pyrE PE=3 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.389e-14
Identity = 50/191 (26.18%), Postives = 99/191 (51.83%), Query Frame = 1
Query:   91 VKFGNFKLKSGISSPVYIDLRLIVSYPSLL---RQISKTIISSLPFTTKYDLVCGVPYTALPIATCVSVS------NDVPMLMRRKEIKDYGTAXAIEGNFKKDEICLIIEDLVTSGASVLETAVPLRAAGLVVTDAVVLIDREQGGRENL-------KENGIELHAMIKLSEMVRVLREKGKLDEETERV 615
            +KFG F LKSG  SP + +  L  +   L    R  ++ ++ S     ++DL+ G  Y  +PIAT  +V+       D+P    RKE KD+G    + G+  +  + ++++D++T+G ++ E+   ++A G  +   ++ +DR++ GR  +       ++ G  + ++I L +++  L EK ++ E    V
Sbjct:   18 LKFGEFTLKSGRKSPYFFNAGLFNTGRDLALLGRFYAEALVDS---GIEFDLLFGPAYKGIPIATTTAVALAEHHDKDLPYCFNRKEAKDHGEGGNLVGSALRGRV-MLVDDVITAGTAIRESMEIIQAHGATLAGVLISLDRQERGRSEISAIHEVERDYGCNVISIITLKDLITYLEEKPEMAEHLAAV 204          
The following BLAST results are available for this feature:
BLAST of CX043425 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 268
Match NameE-valueIdentityDescription
PYRE_BACWK1.165e-1429.89Orotate phosphoribosyltransferase OS=Bacillus weih... [more]
PYRE_STRMU1.521e-1425.97Orotate phosphoribosyltransferase OS=Streptococcus... [more]
PYRE_LISIN1.521e-1429.80Orotate phosphoribosyltransferase OS=Listeria inno... [more]
PYRE_LACLM1.521e-1423.90Orotate phosphoribosyltransferase OS=Lactococcus l... [more]
PYRE_STRPN2.595e-1424.31Orotate phosphoribosyltransferase OS=Streptococcus... [more]
PYRE_BACC42.595e-1429.41Orotate phosphoribosyltransferase OS=Bacillus cere... [more]
PYRE_VIBPA3.389e-1427.08Orotate phosphoribosyltransferase OS=Vibrio paraha... [more]
PYRE_SILPO3.389e-1429.27Orotate phosphoribosyltransferase OS=Silicibacter ... [more]
PYRE_SHEON3.389e-1426.56Orotate phosphoribosyltransferase OS=Shewanella on... [more]
PYRE_SALAR3.389e-1426.18Orotate phosphoribosyltransferase OS=Salmonella ar... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS07_11A03_g Parent Washington Navel Orange Thrip-Challenged Flavedo cDNA Library UCRCS07 Citrus sinensis cDNA clone UCRCS07-11A03-A5-1-7.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX043425 ID=CX043425; Name=CX043425; organism=Citrus sinensis; type=EST; length=672bp
CTTCGTCCCGCTGACAACCCAAAAGGCCGAAATGCAATGTCGTCGAATTC
GATGGAGTCATTGATTCTCCAACTCCACGAGATCTCGGCGGTTAAATTCG
GAAACTTTAAGCTAAAATCCGGCATATCGTCTCCCGTTTACATCGACCTC
CGACTTATCGTTTCTTACCCTTCCCTCCTCCGCCAAATATCCAAAACCAT
CATCTCCTCCCTCCCCTTCACAACCAAATACGACCTCGTGTGCGGCGTTC
CGTACACCGCCCTCCCAATCGCCACCTGCGTCTCCGTCTCCAACGACGTC
CCCATGCTCATGCGGCGCAAGGAAATCAAAGACTACGGCACCGCCNAGGC
CATCGAAGGTAATTTCAAGAAGGACGAAATCTGTCTGATCATCGAAGATT
TAGTCACCAGCGGCGCGTCGGTCCTCGAAACGGCGGTGCCATTGAGAGCG
GCGGGGCTGGTGGTGACGGACGCCGTCGTATTGATCGACAGAGAGCAGGG
AGGGAGGGAGAATCTGAAGGAGAACGGAATTGAGTTGCATGCGATGATAA
AGCTGAGCGAAATGGTTAGGGTTTTGAGGGAGAAAGGGAAGCTTGATGAG
GAAACGGAGAGAGTGGTGATGAAGTTTTTGGAGGAGAACAAGAAAGTGGC
GGCTTCGAATTTAGGTGGGGTT
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